BLASTX nr result

ID: Panax21_contig00024281 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00024281
         (424 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527826.1| tip120, putative [Ricinus communis] gi|22353...   238   5e-61
ref|XP_003550095.1| PREDICTED: cullin-associated NEDD8-dissociat...   236   1e-60
ref|XP_003529694.1| PREDICTED: cullin-associated NEDD8-dissociat...   236   1e-60
ref|XP_002331078.1| predicted protein [Populus trichocarpa] gi|2...   233   1e-59
ref|XP_002328805.1| predicted protein [Populus trichocarpa] gi|2...   231   4e-59

>ref|XP_002527826.1| tip120, putative [Ricinus communis] gi|223532750|gb|EEF34529.1|
            tip120, putative [Ricinus communis]
          Length = 1218

 Score =  238 bits (606), Expect = 5e-61
 Identities = 116/124 (93%), Positives = 121/124 (97%)
 Frame = -1

Query: 421  CLDQVNPSSFIVPYLKSGLDDHYDVKMPCHLILSKLADKCPSAVLAVLDSLVDPLQKTIN 242
            CLDQVNPSSFIVPYLKSGLDDHYDVKMPCHLILSKLADKCPSAVLAVLDSLVDPLQKT+N
Sbjct: 1095 CLDQVNPSSFIVPYLKSGLDDHYDVKMPCHLILSKLADKCPSAVLAVLDSLVDPLQKTVN 1154

Query: 241  FRPKQDAVKQEVDRNEDMIRSALRAIASLNCISGGDCSHKFKNLMSEISKSQTLWEKFCS 62
            F+PKQDAVKQEVDRNEDMIRSALRAIA+LN ISGGDCSHKFKNLM+EISKS TLWEK+ S
Sbjct: 1155 FKPKQDAVKQEVDRNEDMIRSALRAIAALNRISGGDCSHKFKNLMNEISKSPTLWEKYYS 1214

Query: 61   IRNE 50
            IRNE
Sbjct: 1215 IRNE 1218


>ref|XP_003550095.1| PREDICTED: cullin-associated NEDD8-dissociated protein 1-like
            [Glycine max]
          Length = 1218

 Score =  236 bits (602), Expect = 1e-60
 Identities = 117/124 (94%), Positives = 121/124 (97%)
 Frame = -1

Query: 421  CLDQVNPSSFIVPYLKSGLDDHYDVKMPCHLILSKLADKCPSAVLAVLDSLVDPLQKTIN 242
            CLDQVNPSSFIVPYLKSGLDDHYDVKMPCHLILSKLADKCPSAVLAVLDSLVDPLQKTIN
Sbjct: 1095 CLDQVNPSSFIVPYLKSGLDDHYDVKMPCHLILSKLADKCPSAVLAVLDSLVDPLQKTIN 1154

Query: 241  FRPKQDAVKQEVDRNEDMIRSALRAIASLNCISGGDCSHKFKNLMSEISKSQTLWEKFCS 62
            F+PKQDAVKQEVDRNEDMIRSALRAIASLN ISGGDCS KFKNLM+EISKSQTLW+K+ S
Sbjct: 1155 FKPKQDAVKQEVDRNEDMIRSALRAIASLNRISGGDCSVKFKNLMNEISKSQTLWDKYYS 1214

Query: 61   IRNE 50
            IRNE
Sbjct: 1215 IRNE 1218


>ref|XP_003529694.1| PREDICTED: cullin-associated NEDD8-dissociated protein 1-like
            [Glycine max]
          Length = 1218

 Score =  236 bits (602), Expect = 1e-60
 Identities = 117/124 (94%), Positives = 121/124 (97%)
 Frame = -1

Query: 421  CLDQVNPSSFIVPYLKSGLDDHYDVKMPCHLILSKLADKCPSAVLAVLDSLVDPLQKTIN 242
            CLDQVNPSSFIVPYLKSGLDDHYDVKMPCHLILSKLADKCPSAVLAVLDSLVDPLQKTIN
Sbjct: 1095 CLDQVNPSSFIVPYLKSGLDDHYDVKMPCHLILSKLADKCPSAVLAVLDSLVDPLQKTIN 1154

Query: 241  FRPKQDAVKQEVDRNEDMIRSALRAIASLNCISGGDCSHKFKNLMSEISKSQTLWEKFCS 62
            F+PKQDAVKQEVDRNEDMIRSALRAIASLN ISGGDCS KFKNLM+EISKSQTLW+K+ S
Sbjct: 1155 FKPKQDAVKQEVDRNEDMIRSALRAIASLNRISGGDCSVKFKNLMNEISKSQTLWDKYYS 1214

Query: 61   IRNE 50
            IRNE
Sbjct: 1215 IRNE 1218


>ref|XP_002331078.1| predicted protein [Populus trichocarpa] gi|222872806|gb|EEF09937.1|
            predicted protein [Populus trichocarpa]
          Length = 1215

 Score =  233 bits (594), Expect = 1e-59
 Identities = 115/125 (92%), Positives = 120/125 (96%)
 Frame = -1

Query: 424  GCLDQVNPSSFIVPYLKSGLDDHYDVKMPCHLILSKLADKCPSAVLAVLDSLVDPLQKTI 245
            GCLDQVNPSSFIVPYLKSGLDDHYDVKMPCHLILSKLADKCPSAVLAVLDSLV+PLQKT+
Sbjct: 1091 GCLDQVNPSSFIVPYLKSGLDDHYDVKMPCHLILSKLADKCPSAVLAVLDSLVEPLQKTV 1150

Query: 244  NFRPKQDAVKQEVDRNEDMIRSALRAIASLNCISGGDCSHKFKNLMSEISKSQTLWEKFC 65
            NF+PK DAVKQEVDRNEDMIRSALRAIASLN  SGGDCS KFKNLMSEISKSQTLW+K+ 
Sbjct: 1151 NFKPKLDAVKQEVDRNEDMIRSALRAIASLNRTSGGDCSLKFKNLMSEISKSQTLWDKYY 1210

Query: 64   SIRNE 50
            SIRNE
Sbjct: 1211 SIRNE 1215


>ref|XP_002328805.1| predicted protein [Populus trichocarpa] gi|222839103|gb|EEE77454.1|
            predicted protein [Populus trichocarpa]
          Length = 1223

 Score =  231 bits (590), Expect = 4e-59
 Identities = 116/124 (93%), Positives = 119/124 (95%)
 Frame = -1

Query: 421  CLDQVNPSSFIVPYLKSGLDDHYDVKMPCHLILSKLADKCPSAVLAVLDSLVDPLQKTIN 242
            CLDQVNPSSFIVPYLKSGLDDHYDVKMPCHLILSKLADKCPSAVLAVLDSLVDPLQKTIN
Sbjct: 1100 CLDQVNPSSFIVPYLKSGLDDHYDVKMPCHLILSKLADKCPSAVLAVLDSLVDPLQKTIN 1159

Query: 241  FRPKQDAVKQEVDRNEDMIRSALRAIASLNCISGGDCSHKFKNLMSEISKSQTLWEKFCS 62
            F+PKQ AVKQEVDRNEDMIRSALRAIASLN ISGGDCS KFKNLMSEISKS TLW+K+ S
Sbjct: 1160 FKPKQVAVKQEVDRNEDMIRSALRAIASLNRISGGDCSLKFKNLMSEISKSPTLWDKYYS 1219

Query: 61   IRNE 50
            IRNE
Sbjct: 1220 IRNE 1223


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