BLASTX nr result
ID: Panax21_contig00024270
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00024270 (375 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002273353.2| PREDICTED: uncharacterized protein LOC100258... 214 5e-54 ref|XP_003522980.1| PREDICTED: RNA-binding protein 24-like [Glyc... 210 9e-53 ref|XP_004146763.1| PREDICTED: RNA-binding protein Musashi homol... 207 9e-52 ref|XP_003603877.1| RNA-binding protein 24-B [Medicago truncatul... 206 1e-51 ref|XP_003527630.1| PREDICTED: 40S ribosomal protein S19, mitoch... 202 3e-50 >ref|XP_002273353.2| PREDICTED: uncharacterized protein LOC100258188 [Vitis vinifera] Length = 346 Score = 214 bits (546), Expect = 5e-54 Identities = 97/124 (78%), Positives = 107/124 (86%) Frame = +3 Query: 3 FGEILEAVVITDKNTGRSKGYGFVTFRDPESAKRACVDPTPVIDGRRANCNLASLGRSWP 182 FGEILEAVVITDKNTGRSKGYGFVTFRDPESA+RAC+DP P+IDGRRANCNLASLGR P Sbjct: 55 FGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACLDPAPIIDGRRANCNLASLGRPRP 114 Query: 183 ALSFGRFRSALPYPGGMPAARGAYIGGFGYQQPVSYGYQQGLTYPQYGYATYGSEHVYPQ 362 ++S+GR R PY G +PA RG+Y+G FGYQQPVSY YQQG YP YGYA YG E+VYPQ Sbjct: 115 SMSYGRLRPVTPYLGSVPATRGSYVGNFGYQQPVSYSYQQGFMYPSYGYAAYGPEYVYPQ 174 Query: 363 GVYN 374 GVYN Sbjct: 175 GVYN 178 >ref|XP_003522980.1| PREDICTED: RNA-binding protein 24-like [Glycine max] Length = 286 Score = 210 bits (535), Expect = 9e-53 Identities = 96/124 (77%), Positives = 106/124 (85%) Frame = +3 Query: 3 FGEILEAVVITDKNTGRSKGYGFVTFRDPESAKRACVDPTPVIDGRRANCNLASLGRSWP 182 FGEILEAVVITDKNTGRSKGYGFVTFRDPE+A+RAC DP+PVIDGRRANCNLASLGR P Sbjct: 55 FGEILEAVVITDKNTGRSKGYGFVTFRDPEAARRACADPSPVIDGRRANCNLASLGRPRP 114 Query: 183 ALSFGRFRSALPYPGGMPAARGAYIGGFGYQQPVSYGYQQGLTYPQYGYATYGSEHVYPQ 362 L +GR R A PY G + ARGAY+GGFGYQQPVSY YQQGL YP YGY +YG E++YPQ Sbjct: 115 PLPYGRIRPASPYVGSLQPARGAYVGGFGYQQPVSYSYQQGLVYPPYGYTSYGPEYIYPQ 174 Query: 363 GVYN 374 +YN Sbjct: 175 SLYN 178 >ref|XP_004146763.1| PREDICTED: RNA-binding protein Musashi homolog 2-like [Cucumis sativus] gi|449531145|ref|XP_004172548.1| PREDICTED: RNA-binding protein Musashi homolog 2-like [Cucumis sativus] Length = 286 Score = 207 bits (526), Expect = 9e-52 Identities = 100/126 (79%), Positives = 104/126 (82%), Gaps = 2/126 (1%) Frame = +3 Query: 3 FGEILEAVVITDKNTGRSKGYGFVTFRDPESAKRACVDPTPVIDGRRANCNLASLGRSWP 182 FGEILEAVVITDKNTGRSKGYGFVTFRDPESA+RAC DPTP+IDGRRANCNLASLGR P Sbjct: 55 FGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLGRPRP 114 Query: 183 ALSF--GRFRSALPYPGGMPAARGAYIGGFGYQQPVSYGYQQGLTYPQYGYATYGSEHVY 356 LS+ GR R Y GGM RG YIG FGYQQPVSY YQQGL YP YGYATYG E+VY Sbjct: 115 PLSYGTGRLRQPAVYVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGYATYGPEYVY 174 Query: 357 PQGVYN 374 PQG YN Sbjct: 175 PQGGYN 180 >ref|XP_003603877.1| RNA-binding protein 24-B [Medicago truncatula] gi|355492925|gb|AES74128.1| RNA-binding protein 24-B [Medicago truncatula] Length = 371 Score = 206 bits (525), Expect = 1e-51 Identities = 95/125 (76%), Positives = 108/125 (86%), Gaps = 1/125 (0%) Frame = +3 Query: 3 FGEILEAVVITDKNTGRSKGYGFVTFRDPESAKRACVDPTPVIDGRRANCNLASLGR-SW 179 FG+ILEAVVITDKNTGRSKGYGFVTFRDPE+A+RAC DP+PVIDGRRANCNLAS GR Sbjct: 52 FGDILEAVVITDKNTGRSKGYGFVTFRDPEAARRACADPSPVIDGRRANCNLASHGRPRG 111 Query: 180 PALSFGRFRSALPYPGGMPAARGAYIGGFGYQQPVSYGYQQGLTYPQYGYATYGSEHVYP 359 P +S+GR R A PY G + ARGAY+GG+GYQQP+SYGYQQG+ YP YGY TYG E+VYP Sbjct: 112 PPISYGRVRPASPYVGSLQPARGAYVGGYGYQQPLSYGYQQGMVYPPYGYTTYGPEYVYP 171 Query: 360 QGVYN 374 QG+YN Sbjct: 172 QGMYN 176 >ref|XP_003527630.1| PREDICTED: 40S ribosomal protein S19, mitochondrial-like [Glycine max] Length = 293 Score = 202 bits (513), Expect = 3e-50 Identities = 98/132 (74%), Positives = 106/132 (80%), Gaps = 8/132 (6%) Frame = +3 Query: 3 FGEILEAVVITDKNTGRSKGYGFVTFRDPESAKRACVDPTPVIDGRRANCNLASLGRSWP 182 FGEILEAVVITDKNTGRSKGYGFVTFRDPE+A+RAC DPTPVIDGRRANCNLASLGR P Sbjct: 55 FGEILEAVVITDKNTGRSKGYGFVTFRDPEAARRACADPTPVIDGRRANCNLASLGRPRP 114 Query: 183 ALSFG-------RFRSALPYPGGMPAARGAYIGGFGY-QQPVSYGYQQGLTYPQYGYATY 338 L +G R R A PY G + ARGAY+GGFGY QQPVSY YQQGL YP YGY TY Sbjct: 115 PLPYGIVLCLIRRIRPASPYVGSLQPARGAYVGGFGYQQQPVSYSYQQGLVYPPYGYTTY 174 Query: 339 GSEHVYPQGVYN 374 G E++YPQ +YN Sbjct: 175 GPEYIYPQSLYN 186