BLASTX nr result

ID: Panax21_contig00024264 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00024264
         (1745 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527510.1| conserved hypothetical protein [Ricinus comm...    81   2e-25
ref|XP_002298771.1| predicted protein [Populus trichocarpa] gi|2...    84   2e-25
ref|NP_188595.2| uncharacterized protein [Arabidopsis thaliana] ...    81   7e-21
ref|XP_002885318.1| hypothetical protein ARALYDRAFT_479477 [Arab...    79   4e-20
dbj|BAB02546.1| unnamed protein product [Arabidopsis thaliana]         78   6e-20

>ref|XP_002527510.1| conserved hypothetical protein [Ricinus communis]
           gi|223533150|gb|EEF34908.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 731

 Score = 80.9 bits (198), Expect(2) = 2e-25
 Identities = 43/66 (65%), Positives = 53/66 (80%), Gaps = 3/66 (4%)
 Frame = +2

Query: 617 MAFLKSGVLVKLLEGMNVDESGS--QNDHKPVLLQIRSIVPVLEEGD-LWPNRGFYMKVS 787
           MA L SG LVK L+ M+VD   +  Q+D KPVLLQIRSI+PVL EGD LWPN+GF+++VS
Sbjct: 1   MAELSSGSLVKFLQEMHVDGIANTLQDDDKPVLLQIRSIIPVLREGDYLWPNQGFFLRVS 60

Query: 788 DVSHAI 805
           D+SHAI
Sbjct: 61  DLSHAI 66



 Score = 63.2 bits (152), Expect(2) = 2e-25
 Identities = 43/120 (35%), Positives = 67/120 (55%), Gaps = 12/120 (10%)
 Frame = +1

Query: 805  KLEKAHPVPILRGITPVPGRRPCEGTPEDIFPGTNLMRYLEASVTESI---------VEK 957
            +LE A+PVP+L+GI P+PGR PC G P+DI P  NL ++L  +  ESI         ++K
Sbjct: 93   RLEAAYPVPLLKGIRPIPGRHPCLGNPKDIIPMHNLEKFLGFTKLESINEEHDDYDVIKK 152

Query: 958  GVISPDLRKLFRGFSDSEALDKDTVSLEEGNQEKVRSLSASKIGHSEDKI---GLNYYTK 1128
             V SP      +  +DS+A   D +  +E  +EK    S++++   E  I   GL++ +K
Sbjct: 153  TVESP------QSLTDSKARLNDMI--KEKQREKSLCTSSNEVCTDEGIIKTGGLSWKSK 204


>ref|XP_002298771.1| predicted protein [Populus trichocarpa] gi|222846029|gb|EEE83576.1|
           predicted protein [Populus trichocarpa]
          Length = 665

 Score = 84.3 bits (207), Expect(2) = 2e-25
 Identities = 41/63 (65%), Positives = 53/63 (84%)
 Frame = +2

Query: 617 MAFLKSGVLVKLLEGMNVDESGSQNDHKPVLLQIRSIVPVLEEGDLWPNRGFYMKVSDVS 796
           MA LKSGVLVK L+ M+VD   +  D KPVLLQIRSI+PVL EG+LWPN+GF++K+SD++
Sbjct: 1   MAELKSGVLVKFLQEMDVD-GNTIRDCKPVLLQIRSIIPVLREGNLWPNQGFFLKISDLT 59

Query: 797 HAI 805
           HA+
Sbjct: 60  HAL 62



 Score = 59.7 bits (143), Expect(2) = 2e-25
 Identities = 35/90 (38%), Positives = 47/90 (52%)
 Frame = +1

Query: 805  KLEKAHPVPILRGITPVPGRRPCEGTPEDIFPGTNLMRYLEASVTESIVEKGVISPDLRK 984
            KLE A+PVP+LRGI P+PGR PC G P+++    NL  +L  S  E++VE  +  P   +
Sbjct: 89   KLEAAYPVPMLRGIKPLPGRHPCYGNPKELLSIDNLKNFLGVSSLETMVEDCIEVPKKTE 148

Query: 985  LFRGFSDSEALDKDTVSLEEGNQEKVRSLS 1074
                     +L    VS  EG   K   LS
Sbjct: 149  T----EKPRSLSVPKVSAYEGTGYKTGGLS 174


>ref|NP_188595.2| uncharacterized protein [Arabidopsis thaliana]
           gi|332642745|gb|AEE76266.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 640

 Score = 80.9 bits (198), Expect(2) = 7e-21
 Identities = 43/92 (46%), Positives = 61/92 (66%)
 Frame = +2

Query: 530 LLCSVVCI*FIFPKK*HLHSLFVFLPVKKMAFLKSGVLVKLLEGMNVDESGSQNDHKPVL 709
           LLCS + +  +     HL +L +     +MA L+SGVL KLLE M V +     DH+PVL
Sbjct: 9   LLCSFLSVFHLI----HLQALLL-----EMAELRSGVLFKLLEEMGVGKVRRDVDHRPVL 59

Query: 710 LQIRSIVPVLEEGDLWPNRGFYMKVSDVSHAI 805
           LQIR I+PVL  G LWPN+GF+++++D +H+I
Sbjct: 60  LQIRCIIPVLAAGGLWPNKGFFLRITDSTHSI 91



 Score = 47.8 bits (112), Expect(2) = 7e-21
 Identities = 19/39 (48%), Positives = 27/39 (69%)
 Frame = +1

Query: 805 KLEKAHPVPILRGITPVPGRRPCEGTPEDIFPGTNLMRY 921
           KLE A+PVP+++GI P PGRR C G P D+ P   + ++
Sbjct: 118 KLEFAYPVPMIKGIRPTPGRRACTGDPIDLIPKERIEKF 156


>ref|XP_002885318.1| hypothetical protein ARALYDRAFT_479477 [Arabidopsis lyrata subsp.
           lyrata] gi|297331158|gb|EFH61577.1| hypothetical protein
           ARALYDRAFT_479477 [Arabidopsis lyrata subsp. lyrata]
          Length = 613

 Score = 78.6 bits (192), Expect(2) = 4e-20
 Identities = 36/63 (57%), Positives = 49/63 (77%)
 Frame = +2

Query: 617 MAFLKSGVLVKLLEGMNVDESGSQNDHKPVLLQIRSIVPVLEEGDLWPNRGFYMKVSDVS 796
           MA L+SGVL KLLE M V +     DH+PVLLQIRSI+PVL  G LWPN+GF+++++D +
Sbjct: 1   MAELRSGVLFKLLEEMGVGKVRRDVDHRPVLLQIRSIIPVLAAGGLWPNKGFFLRITDST 60

Query: 797 HAI 805
           H++
Sbjct: 61  HSM 63



 Score = 47.8 bits (112), Expect(2) = 4e-20
 Identities = 19/39 (48%), Positives = 27/39 (69%)
 Frame = +1

Query: 805 KLEKAHPVPILRGITPVPGRRPCEGTPEDIFPGTNLMRY 921
           KLE A+PVP+++GI P PGRR C G P D+ P   + ++
Sbjct: 90  KLEFAYPVPMIKGIRPTPGRRACTGDPIDLIPKERIEKF 128


>dbj|BAB02546.1| unnamed protein product [Arabidopsis thaliana]
          Length = 620

 Score = 77.8 bits (190), Expect(2) = 6e-20
 Identities = 36/63 (57%), Positives = 48/63 (76%)
 Frame = +2

Query: 617 MAFLKSGVLVKLLEGMNVDESGSQNDHKPVLLQIRSIVPVLEEGDLWPNRGFYMKVSDVS 796
           MA L+SGVL KLLE M V +     DH+PVLLQIR I+PVL  G LWPN+GF+++++D +
Sbjct: 1   MAELRSGVLFKLLEEMGVGKVRRDVDHRPVLLQIRCIIPVLAAGGLWPNKGFFLRITDST 60

Query: 797 HAI 805
           H+I
Sbjct: 61  HSI 63



 Score = 47.8 bits (112), Expect(2) = 6e-20
 Identities = 19/39 (48%), Positives = 27/39 (69%)
 Frame = +1

Query: 805 KLEKAHPVPILRGITPVPGRRPCEGTPEDIFPGTNLMRY 921
           KLE A+PVP+++GI P PGRR C G P D+ P   + ++
Sbjct: 90  KLEFAYPVPMIKGIRPTPGRRACTGDPIDLIPKERIEKF 128


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