BLASTX nr result

ID: Panax21_contig00024261 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00024261
         (1398 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523493.1| conserved hypothetical protein [Ricinus comm...   354   3e-95
ref|XP_002276403.1| PREDICTED: uncharacterized protein LOC100243...   325   2e-86
ref|XP_003546668.1| PREDICTED: transcription factor bHLH66-like ...   307   5e-81
ref|XP_003533887.1| PREDICTED: transcription factor bHLH66-like ...   300   8e-79
emb|CAN75431.1| hypothetical protein VITISV_021146 [Vitis vinifera]   300   8e-79

>ref|XP_002523493.1| conserved hypothetical protein [Ricinus communis]
            gi|223537200|gb|EEF38832.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 474

 Score =  354 bits (909), Expect = 3e-95
 Identities = 234/457 (51%), Positives = 268/457 (58%), Gaps = 48/457 (10%)
 Frame = -2

Query: 1229 MQPCSREMQAMNSILN---------------------HHHQQQQSQMANSLHXXXXXXXX 1113
            MQPCSREMQ +N++LN                     HHHQ  Q+Q   + H        
Sbjct: 1    MQPCSREMQGINTLLNQSSTATTTSTSQIPIHHNHHHHHHQDLQNQQIQNPH-------- 52

Query: 1112 XQSHGFDPT-SSHDDFLDQMLSSLPSCTWP----PSDLSSSAQNPNNKSLPWEPNLN-MC 951
                 FDP+ SS+DDFL+QMLS+LPSC+W     P DL+++A    N +LP   +L+   
Sbjct: 53   -----FDPSPSSNDDFLEQMLSTLPSCSWADLKSPWDLTTTA----NLNLPKPRDLSDET 103

Query: 950  PPSFDD-----------QSVMLASKLRHHQISGGGP---TSPASKV----LMLQQQLMLS 825
            PPS  D           +SV+LASKLR HQISGGG     SPA+      LMLQQQLM++
Sbjct: 104  PPSLPDSNNNVGFHNFDESVLLASKLRQHQISGGGGGGGPSPAAAAAAAKLMLQQQLMMA 163

Query: 824  RGLSGGLPSPTXXXXXXXXXXXXXXXXXXXXXXXXXXXSFKSLNQGGDGSVQALYNGFAR 645
                GGL                                FKS NQGGDGSVQ LYNGF  
Sbjct: 164  AAARGGLGQ------------------------NDVLDGFKSPNQGGDGSVQGLYNGFGT 199

Query: 644  -SLHASSQTSNQAQHFHHPQGGI--MQAQNYRTPVGGMNXXXXXXXXXXXXXXXXXXXXX 474
             S+H + Q+SNQ  HFHHPQGG   MQAQN+ +P G M                      
Sbjct: 200  GSMHGTGQSSNQ--HFHHPQGGAAAMQAQNFGSPGGAMMNQPQASGSTGGAPAQPRQRVR 257

Query: 473  XXXXXATDPHSIAERLRRERIADRMKSLQELVPNANKTDKASMLDEIIDYVKFLQLQVKV 294
                 ATDPHSIAERLRRERIA+RMK+LQELVPNANKTDKASMLDEIIDYVKFLQLQVKV
Sbjct: 258  ARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKV 317

Query: 293  LSMSRLGGXXXXXXXXASDISSEGGGDCIQPNATAAGGAGEVGRPSNGTQTAAXXXXXXX 114
            LSMSRLGG         +DISSEGGGDCIQ NA  A G G + R +N +QT +       
Sbjct: 318  LSMSRLGG-AAAVAPLVADISSEGGGDCIQANANGAAGNGSLPRANNSSQTPS-----SN 371

Query: 113  XSMTVTEHQVAKLMEEDMGSAMQYLQGKGLCLMPISL 3
             S+TVTEHQVAKLMEEDMGSAMQYLQGKGLCLMPISL
Sbjct: 372  DSLTVTEHQVAKLMEEDMGSAMQYLQGKGLCLMPISL 408


>ref|XP_002276403.1| PREDICTED: uncharacterized protein LOC100243222 [Vitis vinifera]
          Length = 519

 Score =  325 bits (833), Expect = 2e-86
 Identities = 229/461 (49%), Positives = 254/461 (55%), Gaps = 52/461 (11%)
 Frame = -2

Query: 1229 MQPCSREMQAMNSILN----------------HHHQQQQSQMANSLHXXXXXXXXXQSHG 1098
            MQPCSREMQA+NS+LN                HHHQ QQ Q                 + 
Sbjct: 1    MQPCSREMQAINSLLNPSQISLQDLQNGHHHHHHHQHQQQQQHQHHPQIPNPSQIQLPNT 60

Query: 1097 FDPTSSHDDFLDQMLSSLPSCTWPPSDLSS----SAQNP----NNKSLPWEPNLNMCPPS 942
               +SSHDDFL+QMLS+LPS +  P++  S    +A NP    +NKS     +     P 
Sbjct: 61   HFDSSSHDDFLEQMLSTLPSWSDLPANPKSPWELNASNPISMPSNKSRDLSDDTTPSNPD 120

Query: 941  ----FDDQSVMLASKLRHHQISGGGPTSPASKVLMLQQQLMLSRGL---------SGGLP 801
                  D+S MLASKLR HQISG   +S A   LMLQQQL+LSRG+         SG   
Sbjct: 121  NVQFAFDESAMLASKLRQHQISGN--SSAAKSALMLQQQLLLSRGVAMGRSPSNGSGAGE 178

Query: 800  SPTXXXXXXXXXXXXXXXXXXXXXXXXXXXSFKSLNQGGDGSVQALYNGFARSLHASSQT 621
            S                             SFKS NQGGDGSVQALYNGFA +LH S Q 
Sbjct: 179  SGLLQLPLSLSNGDSCLVDRSQNDVVDGSSSFKSPNQGGDGSVQALYNGFAGALHGSGQA 238

Query: 620  SNQAQHFHHPQGGIMQAQNYRTPVGGMNXXXXXXXXXXXXXXXXXXXXXXXXXXATDPHS 441
            SNQAQ+FHHPQGG MQAQNY  P   MN                          ATDPHS
Sbjct: 239  SNQAQNFHHPQGGSMQAQNYGAPATVMN-QTPATGSAGGAPAQPRQRVRARRGQATDPHS 297

Query: 440  IAERLRRERIADRMKSLQELVPNANK------TDKASMLDEIIDYVKFLQLQVK------ 297
            IAERLRRERIA+RMK+LQELVPNANK      TDKASMLDEIIDYVKFLQLQVK      
Sbjct: 298  IAERLRRERIAERMKALQELVPNANKVIHPTLTDKASMLDEIIDYVKFLQLQVKVFLTVV 357

Query: 296  ---VLSMSRLGGXXXXXXXXASDISSEGGGDCIQPNATAAGGAGEVGRPSNGTQTAAXXX 126
               VLSMSRLGG         +D+SSE  G         +G  G  GR +NGTQT     
Sbjct: 358  VVQVLSMSRLGG-AAAVAPLVADMSSEASG--------TSGPTG--GRATNGTQTTT--- 403

Query: 125  XXXXXSMTVTEHQVAKLMEEDMGSAMQYLQGKGLCLMPISL 3
                 S+TVTEHQVAKLMEEDMGSAMQYLQGKGLCLMPISL
Sbjct: 404  --SNDSLTVTEHQVAKLMEEDMGSAMQYLQGKGLCLMPISL 442


>ref|XP_003546668.1| PREDICTED: transcription factor bHLH66-like [Glycine max]
          Length = 475

 Score =  307 bits (786), Expect = 5e-81
 Identities = 216/447 (48%), Positives = 246/447 (55%), Gaps = 38/447 (8%)
 Frame = -2

Query: 1229 MQPCSREMQAMNSILNHHHQ----QQQSQMANSLHXXXXXXXXXQSHGFDPTSSHDDFLD 1062
            MQPCS+EMQ +NS+LN   Q      Q+   N +           +H FD TS HDDFL+
Sbjct: 1    MQPCSKEMQGLNSLLNSSSQISLQDLQNHTTNQIQNSHMNHQHQLAH-FDSTS-HDDFLE 58

Query: 1061 QMLSSLPSCTWPPSDLSSSAQNPNNKSLPWEPNL--NMCPP------------------- 945
            QMLSS   C+W  +DL     NPN K L W+PN   ++ PP                   
Sbjct: 59   QMLSS---CSW--TDL-----NPN-KPLLWDPNTLNDIKPPDETTPSNNNNDATTNVASF 107

Query: 944  -SFDDQSVMLASKLRHHQISGGG--PTSPASKVLMLQQQLMLSRGLSG---GLPSPTXXX 783
             SFD+ S  LASK R+HQIS     P + A+  LMLQ QL+   GL      LP      
Sbjct: 108  SSFDEHST-LASKFRNHQISSNNNAPKNAAAAALMLQHQLLRDSGLLNMPLSLPG----- 161

Query: 782  XXXXXXXXXXXXXXXXXXXXXXXXSFKSLNQGGDGSVQALYNGFARSLHASSQTSNQAQH 603
                                    +F+S N  G  SVQ  YNGFA SLH   Q+SNQ QH
Sbjct: 162  ----------------NDVVVDASTFESPNPSGKASVQTFYNGFAGSLHGVGQSSNQTQH 205

Query: 602  FHHPQGGI--MQAQNY-RTPVGG---MNXXXXXXXXXXXXXXXXXXXXXXXXXXATDPHS 441
            F HPQG    MQ QN+   P GG    N                          ATDPHS
Sbjct: 206  FQHPQGSSNPMQGQNFGAVPAGGGSATNQAPASGAAAGGAPAQPRQRVRARRGQATDPHS 265

Query: 440  IAERLRRERIADRMKSLQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGXXX 261
            IAERLRRERIA+RMK+LQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGG   
Sbjct: 266  IAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGG-AA 324

Query: 260  XXXXXASDISSEGGGDCIQPNATAAGGAGEVGRPSNGT-QTAAXXXXXXXXSMTVTEHQV 84
                  +D+SSEGGGDCIQ N  + GG  +    +  T QT A        S+T+TEHQV
Sbjct: 325  AVAPLVADMSSEGGGDCIQANGKSNGGGAQASTTNTNTNQTTA--TTTSNDSLTMTEHQV 382

Query: 83   AKLMEEDMGSAMQYLQGKGLCLMPISL 3
            AKLMEEDMGSAMQYLQGKGLCLMPISL
Sbjct: 383  AKLMEEDMGSAMQYLQGKGLCLMPISL 409


>ref|XP_003533887.1| PREDICTED: transcription factor bHLH66-like [Glycine max]
          Length = 452

 Score =  300 bits (767), Expect = 8e-79
 Identities = 211/427 (49%), Positives = 237/427 (55%), Gaps = 32/427 (7%)
 Frame = -2

Query: 1187 LNH-HHQQQQSQMANSLHXXXXXXXXXQSHGFDPTSSHDDFLDQMLSSLPSCTWPPSDLS 1011
            +NH HH QQQ Q     H             FD TS HDDFL+QMLSS   C+W  +DL+
Sbjct: 1    MNHQHHHQQQQQHQQQQHQLAH---------FDSTS-HDDFLEQMLSS---CSW--TDLN 45

Query: 1010 SSAQNPNNKSLPWEPNL---------------------NMCPPSFDDQSVMLASKLRHHQ 894
                  +NK L W+PN                      N+  PSFD+ S  LASK R+HQ
Sbjct: 46   ------HNKPLLWDPNTPNDIKPPDETTPSNNNDDATANVVFPSFDEHST-LASKFRNHQ 98

Query: 893  IS-GGGPTSPASKVLMLQQQLMLSRGLSG---GLPSPTXXXXXXXXXXXXXXXXXXXXXX 726
            IS    P + A+   MLQ QL+   GL      LP                         
Sbjct: 99   ISPNNAPKNAAAAAFMLQHQLLRDSGLLNMPLSLPG----------------------ND 136

Query: 725  XXXXXSFKSLNQGGDGSVQALYNGFARSLHASSQTSNQAQHFHHPQGGI--MQAQNY-RT 555
                 SFKS N GG+ SVQALYNGFA SLH + Q+SNQ QHF +PQG    MQ QN+   
Sbjct: 137  VVDASSFKSPNPGGEASVQALYNGFAGSLHGAGQSSNQTQHFQNPQGSSNPMQGQNFGAA 196

Query: 554  PVGG---MNXXXXXXXXXXXXXXXXXXXXXXXXXXATDPHSIAERLRRERIADRMKSLQE 384
            P GG    N                          ATDPHSIAERLRRERIA+RMK+LQE
Sbjct: 197  PAGGGGATNQAPGSGAAAGGAPAQPRQRVRARRGQATDPHSIAERLRRERIAERMKALQE 256

Query: 383  LVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGXXXXXXXXASDISSEGGGDCIQ 204
            LVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGG         +D+ SEGGGDCIQ
Sbjct: 257  LVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGG-AAAVAPLVADMYSEGGGDCIQ 315

Query: 203  PNATAAGGAGEVGRPSNGTQTAAXXXXXXXXSMTVTEHQVAKLMEEDMGSAMQYLQGKGL 24
             N  + GG G     SN  QT+A        S+T+TEHQVAKLMEEDMGSAMQYLQGKGL
Sbjct: 316  ANGNSNGG-GAHAPNSNTNQTSA--TTPSNDSLTMTEHQVAKLMEEDMGSAMQYLQGKGL 372

Query: 23   CLMPISL 3
            CLMPISL
Sbjct: 373  CLMPISL 379


>emb|CAN75431.1| hypothetical protein VITISV_021146 [Vitis vinifera]
          Length = 486

 Score =  300 bits (767), Expect = 8e-79
 Identities = 197/360 (54%), Positives = 214/360 (59%), Gaps = 10/360 (2%)
 Frame = -2

Query: 1052 SSLPSCTWPPSDLSSSAQNPNNKSLPWEPNLNMCPPSFDDQSVMLASKLRHHQISGGGPT 873
            S LP+    PS+ S    +    S P             D+S MLASKLR HQISG   +
Sbjct: 68   SMLPTLISMPSNKSRDLSDDTTPSNPDNVQFAF------DESAMLASKLRQHQISGN--S 119

Query: 872  SPASKVLMLQQQLMLSRGL---------SGGLPSPTXXXXXXXXXXXXXXXXXXXXXXXX 720
            S A   LMLQQQL+LSRG+         SG   S                          
Sbjct: 120  SAAKSALMLQQQLLLSRGVAMGRSPSNGSGAGESGLLQLPLSLSNGDSCLVDRSQNDVVD 179

Query: 719  XXXSFKSLNQGGDGSVQALYNGFAR-SLHASSQTSNQAQHFHHPQGGIMQAQNYRTPVGG 543
               S KS NQGGDGSVQALYNGFA  +LH S Q SNQAQ+FHHPQGG MQAQNY  P   
Sbjct: 180  GSSSXKSPNQGGDGSVQALYNGFAPGALHGSGQASNQAQNFHHPQGGSMQAQNYGAPATV 239

Query: 542  MNXXXXXXXXXXXXXXXXXXXXXXXXXXATDPHSIAERLRRERIADRMKSLQELVPNANK 363
            MN                           T PHSIAERLRRERIA+RMK+LQELVPNANK
Sbjct: 240  MNQTPATGSAGGAPAQPRQRVRARRGQA-THPHSIAERLRRERIAERMKALQELVPNANK 298

Query: 362  TDKASMLDEIIDYVKFLQLQVKVLSMSRLGGXXXXXXXXASDISSEGGGDCIQPNATAAG 183
            TDKASMLDEIIDYVKFLQLQVKVLSMSRLGG         +D+SSEGGGDCIQ + T +G
Sbjct: 299  TDKASMLDEIIDYVKFLQLQVKVLSMSRLGG-AAAVAPLVADMSSEGGGDCIQASGT-SG 356

Query: 182  GAGEVGRPSNGTQTAAXXXXXXXXSMTVTEHQVAKLMEEDMGSAMQYLQGKGLCLMPISL 3
              G  GR +NGTQT          S+TVTEHQVAKLMEEDMGSAMQYLQGKGLCLMPISL
Sbjct: 357  PTG--GRATNGTQTXT-----SNDSLTVTEHQVAKLMEEDMGSAMQYLQGKGLCLMPISL 409


Top