BLASTX nr result

ID: Panax21_contig00024259 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00024259
         (500 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275650.1| PREDICTED: glutamyl-tRNA(Gln) amidotransfera...   124   8e-27
ref|XP_004161755.1| PREDICTED: glutamyl-tRNA(Gln) amidotransfera...   114   6e-24
ref|XP_004136231.1| PREDICTED: glutamyl-tRNA(Gln) amidotransfera...   114   6e-24
ref|XP_002516491.1| Glutamyl-tRNA(Gln) amidotransferase subunit ...   113   2e-23
ref|NP_001050789.1| Os03g0651000 [Oryza sativa Japonica Group] g...   106   2e-21

>ref|XP_002275650.1| PREDICTED: glutamyl-tRNA(Gln) amidotransferase subunit C,
           chloroplastic/mitochondrial [Vitis vinifera]
           gi|353558764|sp|D7STK2.1|GATC_VITVI RecName:
           Full=Glutamyl-tRNA(Gln) amidotransferase subunit C,
           chloroplastic/mitochondrial; Short=Glu-AdT subunit C;
           Flags: Precursor gi|296081596|emb|CBI20601.3| unnamed
           protein product [Vitis vinifera]
          Length = 137

 Score =  124 bits (311), Expect = 8e-27
 Identities = 59/76 (77%), Positives = 67/76 (88%)
 Frame = +3

Query: 273 AARSSYESPDLPRLAEAARISLTPNEVEEFTPKIQQVVDWFGQLQAVDLQSVEPAIRADT 452
           + RS+   PDLPRLAE ARISLTP+EVEEF PKI+QV+DWFGQLQAVDLQS+EP+IRADT
Sbjct: 38  STRSALLPPDLPRLAETARISLTPHEVEEFAPKIRQVIDWFGQLQAVDLQSIEPSIRADT 97

Query: 453 EGSNWRDELPETFENR 500
           EG N RD+ PETFENR
Sbjct: 98  EGDNLRDDSPETFENR 113


>ref|XP_004161755.1| PREDICTED: glutamyl-tRNA(Gln) amidotransferase subunit C,
           chloroplastic/mitochondrial-like [Cucumis sativus]
          Length = 145

 Score =  114 bits (286), Expect = 6e-24
 Identities = 55/83 (66%), Positives = 68/83 (81%), Gaps = 2/83 (2%)
 Frame = +3

Query: 258 RNFTAAA--RSSYESPDLPRLAEAARISLTPNEVEEFTPKIQQVVDWFGQLQAVDLQSVE 431
           RN + A+   +S + PD+PRLA+ ARISLTP + EEF PKI QVVDWFGQLQ VDLQS+E
Sbjct: 39  RNSSTASGISASLQPPDVPRLAQTARISLTPTQAEEFAPKITQVVDWFGQLQTVDLQSIE 98

Query: 432 PAIRADTEGSNWRDELPETFENR 500
           P+IRADTEG + R+++PETFENR
Sbjct: 99  PSIRADTEGGSQRNDIPETFENR 121


>ref|XP_004136231.1| PREDICTED: glutamyl-tRNA(Gln) amidotransferase subunit C,
           chloroplastic/mitochondrial-like [Cucumis sativus]
          Length = 145

 Score =  114 bits (286), Expect = 6e-24
 Identities = 55/83 (66%), Positives = 68/83 (81%), Gaps = 2/83 (2%)
 Frame = +3

Query: 258 RNFTAAA--RSSYESPDLPRLAEAARISLTPNEVEEFTPKIQQVVDWFGQLQAVDLQSVE 431
           RN + A+   +S + PD+PRLA+ ARISLTP + EEF PKI QVVDWFGQLQ VDLQS+E
Sbjct: 39  RNSSTASGISASLQPPDVPRLAQTARISLTPTQAEEFAPKITQVVDWFGQLQTVDLQSIE 98

Query: 432 PAIRADTEGSNWRDELPETFENR 500
           P+IRADTEG + R+++PETFENR
Sbjct: 99  PSIRADTEGGSQRNDIPETFENR 121


>ref|XP_002516491.1| Glutamyl-tRNA(Gln) amidotransferase subunit C, putative [Ricinus
           communis] gi|353558760|sp|B9RRX2.1|GATC_RICCO RecName:
           Full=Glutamyl-tRNA(Gln) amidotransferase subunit C,
           chloroplastic/mitochondrial; Short=Glu-AdT subunit C;
           Flags: Precursor gi|223544311|gb|EEF45832.1|
           Glutamyl-tRNA(Gln) amidotransferase subunit C, putative
           [Ricinus communis]
          Length = 143

 Score =  113 bits (282), Expect = 2e-23
 Identities = 68/132 (51%), Positives = 79/132 (59%), Gaps = 2/132 (1%)
 Frame = +3

Query: 111 IGGRAFLLLKGKATXXXXXXXXXXXXQIPSFSFTKTYGSFIXXXXXXGGRNFTAAAR--S 284
           +G RA LLLK                QI   ++TK              R F+  A   S
Sbjct: 1   MGSRALLLLK---------VALPLKHQIKCLNYTK----ITPASELLTKRRFSIKATNGS 47

Query: 285 SYESPDLPRLAEAARISLTPNEVEEFTPKIQQVVDWFGQLQAVDLQSVEPAIRADTEGSN 464
           S + PD+ RLAE ARISL  NEVEEF PKI+QV+DWFGQLQAVDL SVEPAIRAD+EG N
Sbjct: 48  SLQPPDVSRLAETARISLNQNEVEEFAPKIRQVIDWFGQLQAVDLNSVEPAIRADSEGEN 107

Query: 465 WRDELPETFENR 500
            RD++PETF  R
Sbjct: 108 LRDDVPETFSER 119


>ref|NP_001050789.1| Os03g0651000 [Oryza sativa Japonica Group]
           gi|75271878|sp|Q7XZZ1.1|GATC_ORYSJ RecName:
           Full=Glutamyl-tRNA(Gln) amidotransferase subunit C,
           chloroplastic/mitochondrial; Short=Glu-AdT subunit C;
           Flags: Precursor gi|353558757|sp|A2XK57.1|GATC_ORYSI
           RecName: Full=Glutamyl-tRNA(Gln) amidotransferase
           subunit C, chloroplastic/mitochondrial; Short=Glu-AdT
           subunit C; Flags: Precursor gi|31712092|gb|AAP68396.1|
           unknown protein [Oryza sativa Japonica Group]
           gi|62733418|gb|AAX95535.1| Putative Glutamyl-tRNA(Gln)
           amidotransferase, C subunit [Oryza sativa Japonica
           Group] gi|108710125|gb|ABF97920.1| glutamyl-tRNA
           amidotransferase, C subunit family protein, expressed
           [Oryza sativa Japonica Group]
           gi|113549260|dbj|BAF12703.1| Os03g0651000 [Oryza sativa
           Japonica Group] gi|125545078|gb|EAY91217.1| hypothetical
           protein OsI_12826 [Oryza sativa Indica Group]
           gi|125587301|gb|EAZ27965.1| hypothetical protein
           OsJ_11926 [Oryza sativa Japonica Group]
           gi|215767743|dbj|BAG99971.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 153

 Score =  106 bits (264), Expect = 2e-21
 Identities = 53/78 (67%), Positives = 63/78 (80%), Gaps = 1/78 (1%)
 Frame = +3

Query: 270 AAARSSYESPDLPRLAEAARISLTPNEVEEFTPKIQQVVDWFGQLQAVDLQSVEPAIRAD 449
           AA   + E PDLPRLA AARISL+P E EEF PKI+QVVDWFGQLQAVDL+SVEP++RA 
Sbjct: 52  AAGSGALEPPDLPRLANAARISLSPEEAEEFAPKIRQVVDWFGQLQAVDLESVEPSLRAG 111

Query: 450 T-EGSNWRDELPETFENR 500
           T  G++ R++ PETF NR
Sbjct: 112 TAAGNSLREDRPETFTNR 129


Top