BLASTX nr result

ID: Panax21_contig00024247 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00024247
         (957 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279657.2| PREDICTED: 50S ribosomal protein L6, chlorop...   372   e-101
ref|XP_002320459.1| predicted protein [Populus trichocarpa] gi|2...   353   3e-95
ref|XP_003548187.1| PREDICTED: 50S ribosomal protein L6, chlorop...   350   2e-94
gb|AFK43716.1| unknown [Medicago truncatula]                          345   7e-93
ref|XP_003548188.1| PREDICTED: 50S ribosomal protein L6, chlorop...   342   8e-92

>ref|XP_002279657.2| PREDICTED: 50S ribosomal protein L6, chloroplastic-like [Vitis
           vinifera] gi|297739290|emb|CBI28941.3| unnamed protein
           product [Vitis vinifera]
          Length = 226

 Score =  372 bits (955), Expect = e-101
 Identities = 180/216 (83%), Positives = 201/216 (93%)
 Frame = +2

Query: 2   ASSVTASYQTSNLRSAFLGKRNGIYVSSIPVTHVGFTRKTVECKESRIGKQPIEVPSNVT 181
           ASS+T S+QTSNLRSAFLG+RNGIYVSS+PVT VGF RKT+ECKESRIGK+PIEVPSNVT
Sbjct: 2   ASSITPSFQTSNLRSAFLGERNGIYVSSVPVTRVGFLRKTIECKESRIGKKPIEVPSNVT 61

Query: 182 LTLEGQDLKVKGPLGELALTYPREVKLDKQESGLFKVNKAMETRRANQMHGLFRTLTNNM 361
           +TLEGQDLKVKGPLGEL+ TYPREVK+ K ESG+  V KA ETRRANQMHGLFRTLT+NM
Sbjct: 62  ITLEGQDLKVKGPLGELSRTYPREVKVQKDESGILTVKKAFETRRANQMHGLFRTLTDNM 121

Query: 362 VVGVSKGFDKRLQLIGVGYRATLEGKDLVLSLGFSHPVRMTIPVGLQVKVEENTRIIVSG 541
           VVGVSKGF+KRLQL+GVGYRAT+EGKDLVL+LGFSHPVRM IP  L+VKVE+NTRIIVSG
Sbjct: 122 VVGVSKGFEKRLQLVGVGYRATVEGKDLVLNLGFSHPVRMPIPGDLKVKVEDNTRIIVSG 181

Query: 542 YDKSEVGQFAASIRKWRPPEPYKGKGVKYADEVIRR 649
           YDK  +GQFAAS+RKWRPPEPYKGKGVKYADE++RR
Sbjct: 182 YDKCNIGQFAASVRKWRPPEPYKGKGVKYADEIVRR 217


>ref|XP_002320459.1| predicted protein [Populus trichocarpa] gi|222861232|gb|EEE98774.1|
           predicted protein [Populus trichocarpa]
          Length = 227

 Score =  353 bits (906), Expect = 3e-95
 Identities = 168/215 (78%), Positives = 196/215 (91%)
 Frame = +2

Query: 2   ASSVTASYQTSNLRSAFLGKRNGIYVSSIPVTHVGFTRKTVECKESRIGKQPIEVPSNVT 181
           +SS+T+S+QTSNLRS FLG+RN I V S+PVT +GF RK +ECKESRIGKQPI+VPSNVT
Sbjct: 3   SSSITSSFQTSNLRSVFLGERNRICVPSVPVTRIGFLRKAIECKESRIGKQPIQVPSNVT 62

Query: 182 LTLEGQDLKVKGPLGELALTYPREVKLDKQESGLFKVNKAMETRRANQMHGLFRTLTNNM 361
           + LEGQDLKVKGPLGEL+ TYPREVKL++ E G+ +V KA+ETRRANQMHGLFRTLT+NM
Sbjct: 63  IKLEGQDLKVKGPLGELSRTYPREVKLERDEDGIIRVKKALETRRANQMHGLFRTLTDNM 122

Query: 362 VVGVSKGFDKRLQLIGVGYRATLEGKDLVLSLGFSHPVRMTIPVGLQVKVEENTRIIVSG 541
           VVGVSKGF+KRLQL+GVGYRA +EGKDLVLSLGFSHPVRM IP  LQVKVEENTRI+VSG
Sbjct: 123 VVGVSKGFEKRLQLVGVGYRANVEGKDLVLSLGFSHPVRMAIPATLQVKVEENTRIVVSG 182

Query: 542 YDKSEVGQFAASIRKWRPPEPYKGKGVKYADEVIR 646
           +DK  +G+FAASIR+WRPPEPYKGKGV+YA+E+IR
Sbjct: 183 FDKCSIGEFAASIRRWRPPEPYKGKGVRYANEIIR 217


>ref|XP_003548187.1| PREDICTED: 50S ribosomal protein L6, chloroplastic-like isoform 1
           [Glycine max]
          Length = 226

 Score =  350 bits (899), Expect = 2e-94
 Identities = 168/216 (77%), Positives = 198/216 (91%)
 Frame = +2

Query: 2   ASSVTASYQTSNLRSAFLGKRNGIYVSSIPVTHVGFTRKTVECKESRIGKQPIEVPSNVT 181
           ASSVT+S++ SNL+S F+G+ N + VSS+P  HVGF RKTVECKESRIGKQPI VPSNVT
Sbjct: 2   ASSVTSSFRISNLKSVFVGETNKLRVSSVPGAHVGFNRKTVECKESRIGKQPIPVPSNVT 61

Query: 182 LTLEGQDLKVKGPLGELALTYPREVKLDKQESGLFKVNKAMETRRANQMHGLFRTLTNNM 361
           + LEGQD++VKGPLGELALTYPREV ++++ESG  +V KA+ETRRANQMHGLFRTLT+N+
Sbjct: 62  VKLEGQDIQVKGPLGELALTYPREVLVEREESGTLRVKKAVETRRANQMHGLFRTLTDNL 121

Query: 362 VVGVSKGFDKRLQLIGVGYRATLEGKDLVLSLGFSHPVRMTIPVGLQVKVEENTRIIVSG 541
           V+GVSKGFDK+LQL+GVGYRA +EG ++VL+LGFSHPV+MTIP GL+VKVEENTRI VSG
Sbjct: 122 VIGVSKGFDKKLQLVGVGYRAMVEGNEVVLNLGFSHPVKMTIPDGLKVKVEENTRITVSG 181

Query: 542 YDKSEVGQFAASIRKWRPPEPYKGKGVKYADEVIRR 649
           YDKSEVGQFAASIRKWRPPEPYKGKGVKYADE++RR
Sbjct: 182 YDKSEVGQFAASIRKWRPPEPYKGKGVKYADEIVRR 217


>gb|AFK43716.1| unknown [Medicago truncatula]
          Length = 226

 Score =  345 bits (886), Expect = 7e-93
 Identities = 165/216 (76%), Positives = 196/216 (90%)
 Frame = +2

Query: 2   ASSVTASYQTSNLRSAFLGKRNGIYVSSIPVTHVGFTRKTVECKESRIGKQPIEVPSNVT 181
           ASSVT+S+Q SN +S+F+G+R+ I +SS P THVGF RKT ECKESRIGKQPI VPSNVT
Sbjct: 2   ASSVTSSFQLSNFKSSFVGERSRIRISSAPATHVGFFRKTTECKESRIGKQPIPVPSNVT 61

Query: 182 LTLEGQDLKVKGPLGELALTYPREVKLDKQESGLFKVNKAMETRRANQMHGLFRTLTNNM 361
           + +EGQ    KGPLGEL+LTYPREVK+++QE G+ KV+KA+ETRRANQMHGLFRTLT+N+
Sbjct: 62  IKMEGQYFHAKGPLGELSLTYPREVKVERQEEGVLKVSKAVETRRANQMHGLFRTLTDNI 121

Query: 362 VVGVSKGFDKRLQLIGVGYRATLEGKDLVLSLGFSHPVRMTIPVGLQVKVEENTRIIVSG 541
           VVGVSKGF+K+LQLIGVGYRAT+EG ++VL+LGFSHPV+MTIP GL+VKV+ENTRI VSG
Sbjct: 122 VVGVSKGFEKKLQLIGVGYRATVEGNEVVLNLGFSHPVKMTIPEGLKVKVDENTRITVSG 181

Query: 542 YDKSEVGQFAASIRKWRPPEPYKGKGVKYADEVIRR 649
           YDKSE+GQFAASIRKWRPPEPYKGKG+KY DEV+RR
Sbjct: 182 YDKSEIGQFAASIRKWRPPEPYKGKGIKYEDEVVRR 217


>ref|XP_003548188.1| PREDICTED: 50S ribosomal protein L6, chloroplastic-like isoform 2
           [Glycine max]
          Length = 223

 Score =  342 bits (877), Expect = 8e-92
 Identities = 166/216 (76%), Positives = 196/216 (90%)
 Frame = +2

Query: 2   ASSVTASYQTSNLRSAFLGKRNGIYVSSIPVTHVGFTRKTVECKESRIGKQPIEVPSNVT 181
           ASSVT+S++   +RS F+G+ N + VSS+P  HVGF RKTVECKESRIGKQPI VPSNVT
Sbjct: 2   ASSVTSSFR---IRSVFVGETNKLRVSSVPGAHVGFNRKTVECKESRIGKQPIPVPSNVT 58

Query: 182 LTLEGQDLKVKGPLGELALTYPREVKLDKQESGLFKVNKAMETRRANQMHGLFRTLTNNM 361
           + LEGQD++VKGPLGELALTYPREV ++++ESG  +V KA+ETRRANQMHGLFRTLT+N+
Sbjct: 59  VKLEGQDIQVKGPLGELALTYPREVLVEREESGTLRVKKAVETRRANQMHGLFRTLTDNL 118

Query: 362 VVGVSKGFDKRLQLIGVGYRATLEGKDLVLSLGFSHPVRMTIPVGLQVKVEENTRIIVSG 541
           V+GVSKGFDK+LQL+GVGYRA +EG ++VL+LGFSHPV+MTIP GL+VKVEENTRI VSG
Sbjct: 119 VIGVSKGFDKKLQLVGVGYRAMVEGNEVVLNLGFSHPVKMTIPDGLKVKVEENTRITVSG 178

Query: 542 YDKSEVGQFAASIRKWRPPEPYKGKGVKYADEVIRR 649
           YDKSEVGQFAASIRKWRPPEPYKGKGVKYADE++RR
Sbjct: 179 YDKSEVGQFAASIRKWRPPEPYKGKGVKYADEIVRR 214


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