BLASTX nr result

ID: Panax21_contig00024234 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00024234
         (545 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518751.1| conserved hypothetical protein [Ricinus comm...   289   2e-76
emb|CAN64994.1| hypothetical protein VITISV_001778 [Vitis vinifera]   283   2e-74
ref|XP_003528513.1| PREDICTED: uncharacterized protein LOC100807...   275   4e-72
ref|XP_002313122.1| predicted protein [Populus trichocarpa] gi|2...   273   2e-71
ref|XP_002330299.1| predicted protein [Populus trichocarpa] gi|2...   271   4e-71

>ref|XP_002518751.1| conserved hypothetical protein [Ricinus communis]
           gi|223542132|gb|EEF43676.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 531

 Score =  289 bits (739), Expect = 2e-76
 Identities = 141/175 (80%), Positives = 157/175 (89%)
 Frame = -1

Query: 545 KDAADKAILVDMFLFALDNRPPSSIMLISGDVDFSPALHILGQRGYTVILVIPSGVGVSS 366
           KDAADKAILVDMFLFALDN PPSSIMLISGDVDF+PALHILGQRGYTVILVIPSGVGVSS
Sbjct: 121 KDAADKAILVDMFLFALDNPPPSSIMLISGDVDFAPALHILGQRGYTVILVIPSGVGVSS 180

Query: 365 ALSNAGRFVWDWPSVVRGEGFLRQGKALIAPRGGPADVSGFLMGCQISDNPDGQNAEEAI 186
           ALSNAG+FVWDWPSV RGEGF+   KAL+ P  GPAD++G+LMGC I+D+ DGQN EEAI
Sbjct: 181 ALSNAGKFVWDWPSVARGEGFVPPSKALMPPYAGPADIAGYLMGCHINDSADGQNEEEAI 240

Query: 185 VYRGISQTYYNSRDFSVMTQSLSEYNSTSISGPYFPNTLRSHSLPSGLNEVSAGP 21
           VYRGISQ Y NSRDFSV++QSLSEY S+S++ PYFP ++RS SLPSGLNE SAGP
Sbjct: 241 VYRGISQNYCNSRDFSVVSQSLSEYYSSSVTMPYFPTSMRSQSLPSGLNEASAGP 295


>emb|CAN64994.1| hypothetical protein VITISV_001778 [Vitis vinifera]
          Length = 531

 Score =  283 bits (723), Expect = 2e-74
 Identities = 143/182 (78%), Positives = 159/182 (87%), Gaps = 1/182 (0%)
 Frame = -1

Query: 545 KDAADKAILVDMFLFALDNRPPSSIMLISGDVDFSPALHILGQRGYTVILVIPSGVGVSS 366
           KDAADKAILVDMFLFALDN PPSSIMLISGDVDF+PALHILGQRGYTVILVIPSGVGV+S
Sbjct: 120 KDAADKAILVDMFLFALDNPPPSSIMLISGDVDFAPALHILGQRGYTVILVIPSGVGVAS 179

Query: 365 ALSNAGRFVWDWPSVVRGEGFLRQGKALIAPRGGPADVSGFLMGCQISDNPDGQNAEEAI 186
           AL NAGRFVWDWPSV RGEGF+   K LI PRGG AD++G LMGC I+DNPDGQN EEAI
Sbjct: 180 ALCNAGRFVWDWPSVARGEGFVPPTKVLIPPRGGTADIAGCLMGCHINDNPDGQNEEEAI 239

Query: 185 VYRGISQTYYNSRDFSVMTQSLSEYNST-SISGPYFPNTLRSHSLPSGLNEVSAGPSAAC 9
           VYRG+SQ YY++RDFS+++QSLSE+NS+ SI+   FP TLRS SLPSGLNE SAGP +  
Sbjct: 240 VYRGMSQGYYSTRDFSIISQSLSEFNSSASITMSCFPPTLRSQSLPSGLNEASAGPISYG 299

Query: 8   EQ 3
           EQ
Sbjct: 300 EQ 301


>ref|XP_003528513.1| PREDICTED: uncharacterized protein LOC100807418 [Glycine max]
          Length = 510

 Score =  275 bits (702), Expect = 4e-72
 Identities = 132/174 (75%), Positives = 151/174 (86%)
 Frame = -1

Query: 545 KDAADKAILVDMFLFALDNRPPSSIMLISGDVDFSPALHILGQRGYTVILVIPSGVGVSS 366
           KDAADKAILVDMFLFALDN PPSSIMLISGDVDF+PALHILGQRGYTVILVIP+ VGVSS
Sbjct: 98  KDAADKAILVDMFLFALDNPPPSSIMLISGDVDFAPALHILGQRGYTVILVIPANVGVSS 157

Query: 365 ALSNAGRFVWDWPSVVRGEGFLRQGKALIAPRGGPADVSGFLMGCQISDNPDGQNAEEAI 186
           AL NAG+FVWDWPSVVRGEGF+   KAL+ PRGGP D++G+LMGC I+DN DGQN EEAI
Sbjct: 158 ALCNAGKFVWDWPSVVRGEGFVPPSKALVPPRGGPVDLAGYLMGCHINDNSDGQNEEEAI 217

Query: 185 VYRGISQTYYNSRDFSVMTQSLSEYNSTSISGPYFPNTLRSHSLPSGLNEVSAG 24
           VYRG+SQ+YYNSR+FS+++QSLSEYN  + +  Y P T+RSHS PS LN+   G
Sbjct: 218 VYRGMSQSYYNSREFSMVSQSLSEYNCGTSNTTYLPTTMRSHSFPSVLNDAPGG 271


>ref|XP_002313122.1| predicted protein [Populus trichocarpa] gi|222849530|gb|EEE87077.1|
           predicted protein [Populus trichocarpa]
          Length = 504

 Score =  273 bits (697), Expect = 2e-71
 Identities = 136/178 (76%), Positives = 156/178 (87%), Gaps = 1/178 (0%)
 Frame = -1

Query: 545 KDAADKAILVDMFLFALDNRPPSSIMLISGDVDFSPALHILGQRGYTVILVIPSGVGVSS 366
           KDAADKAILVDMFLFALDN PPSSIMLISGDVDFSPALHILGQRGYTVILVIPSGVGVSS
Sbjct: 93  KDAADKAILVDMFLFALDNPPPSSIMLISGDVDFSPALHILGQRGYTVILVIPSGVGVSS 152

Query: 365 ALSNAGRFVWDWPSVVRGEGFLRQGKALIAPRGGPADVSGFLMGCQISDNPDGQNAEEAI 186
           AL NAG+FVWDWPSV RGEGF+   K L+    GPAD++G+ MGC+I+D+ DGQN EEAI
Sbjct: 153 ALCNAGKFVWDWPSVARGEGFIPPLKTLLPAHLGPADIAGYSMGCRINDSHDGQNEEEAI 212

Query: 185 VYRGISQTYYNSRDFSVMTQSLSEYNSTSI-SGPYFPNTLRSHSLPSGLNEVSAGPSA 15
           VYRG++Q+YYN RDFS++T+SLSEYNS+S+ S P FP + RS SLPSGL EVSAGP++
Sbjct: 213 VYRGLAQSYYNLRDFSIVTRSLSEYNSSSLMSLPCFPTSSRSQSLPSGLKEVSAGPAS 270


>ref|XP_002330299.1| predicted protein [Populus trichocarpa] gi|222871334|gb|EEF08465.1|
           predicted protein [Populus trichocarpa]
          Length = 531

 Score =  271 bits (694), Expect = 4e-71
 Identities = 136/178 (76%), Positives = 153/178 (85%), Gaps = 1/178 (0%)
 Frame = -1

Query: 545 KDAADKAILVDMFLFALDNRPPSSIMLISGDVDFSPALHILGQRGYTVILVIPSGVGVSS 366
           KDAADKAILVDMFLFALDN PPSSIMLISGDVDFSPALHILGQRGYTVILVIPSGVGVSS
Sbjct: 120 KDAADKAILVDMFLFALDNPPPSSIMLISGDVDFSPALHILGQRGYTVILVIPSGVGVSS 179

Query: 365 ALSNAGRFVWDWPSVVRGEGFLRQGKALIAPRGGPADVSGFLMGCQISDNPDGQNAEEAI 186
           AL NAG+FVWDWPSV RGEGF+   K L+    GPAD++G+ MGC+I+DN DGQN EEAI
Sbjct: 180 ALCNAGKFVWDWPSVARGEGFIPPSKTLLPSHAGPADIAGYFMGCRINDNHDGQNEEEAI 239

Query: 185 VYRGISQTYYNSRDFSVMTQSLSEYNSTSI-SGPYFPNTLRSHSLPSGLNEVSAGPSA 15
           VY G SQ+YYNSRD S+M+QSLSEYNS+S+ + P  P + RS SLPSGLNEVSA P++
Sbjct: 240 VYWGRSQSYYNSRDLSIMSQSLSEYNSSSLMTVPCHPTSSRSQSLPSGLNEVSACPTS 297


Top