BLASTX nr result

ID: Panax21_contig00024232 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00024232
         (2031 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273302.1| PREDICTED: uncharacterized protein LOC100266...   466   e-128
ref|XP_002514596.1| splicing factor, arginine/serine-rich 2,rnap...   298   5e-78
ref|XP_004171857.1| PREDICTED: uncharacterized protein LOC101229...   207   7e-51
ref|XP_004137609.1| PREDICTED: uncharacterized protein LOC101204...   202   4e-49
gb|EEC80403.1| hypothetical protein OsI_22555 [Oryza sativa Indi...   178   4e-42

>ref|XP_002273302.1| PREDICTED: uncharacterized protein LOC100266325 [Vitis vinifera]
            gi|297734114|emb|CBI15361.3| unnamed protein product
            [Vitis vinifera]
          Length = 648

 Score =  466 bits (1198), Expect = e-128
 Identities = 275/610 (45%), Positives = 353/610 (57%), Gaps = 16/610 (2%)
 Frame = -3

Query: 2029 FCFVCIMEWAKVESRCPMCKRRFAAIRRPPKDGVFPAERIVNVPVRDQAYHYFGNDTTGP 1850
            FCFVCIMEWAKVESRCPMCKRRF+ IRRPPK GVFP+ERIVNVPVRDQAYH+FGN TTGP
Sbjct: 75   FCFVCIMEWAKVESRCPMCKRRFSTIRRPPKPGVFPSERIVNVPVRDQAYHHFGNVTTGP 134

Query: 1849 PDPYSEVQCTVCQNTSNXXXXXXXXXXXSASHTYCVGLGATVPEGDWFCQDCTLLRDEHS 1670
             DPY+EV C +C  T++           SA+HTYCVGLG TVPEGDWFC DCT+ R EH+
Sbjct: 135  SDPYAEVDCGICHGTADESFLLICDLCDSAAHTYCVGLGHTVPEGDWFCHDCTVSRAEHA 194

Query: 1669 KDDKDPDCDSQTGSEPNYGNQTKFEKFHQIPSSETRVSILDVVREPSLHEAERSSSNRHC 1490
              + D   D          ++  F  F++ PS+ET VSI D+V EP   E ER  S    
Sbjct: 195  NGEIDAVFD----------DRNNFRNFYRKPSAETHVSICDIVAEPYTREDERPPS---- 240

Query: 1489 LLSTVVPEEGLSVADTIIDHGSGKQSFVGHGASQLGARTLGHCRNVHGRIRALRENWNRF 1310
             + +  P    S         + +   V + +S   ARTL  CRNV+  I+ALRENWN  
Sbjct: 241  -IGSSHPNRPSSPIAL-----NSENFAVNNSSSMSVARTLLRCRNVNAHIQALRENWNAL 294

Query: 1309 RQGSLSFSSNSNDKYGVGSVTRGRXXXXXXXXXXXXXXXXQKGSSCNTLPNSG-TEDIDK 1133
            R GS++FSS   D  G  S                       G+SC    N+  + D +K
Sbjct: 295  RSGSMTFSSILGDSGGESS------------------QKYNVGASCPKQDNNACSYDTEK 336

Query: 1132 AWKMMDVAKSIEKDRRRTNIAHHASKGSKHPLRKVNTPKEADSGTSKVLTSSSIGNKNCD 953
            AWKMMD AKSI++   RT I H     SKHPL KVN PKE     + V +SS+  N+   
Sbjct: 337  AWKMMDKAKSIQRACERTGIIHQV---SKHPLGKVNVPKE----VANVKSSSATNNRQLG 389

Query: 952  GLKLEKHYQDCAIVKTNDRHKYHMFKGGKPSEVS-----KLIEGYPDTRSIVYSELSSSM 788
                  H++  ++   N R+K    +  +   V+     K  E      S+V  +  SS 
Sbjct: 390  NKDFGWHFKHHSLETDNKRYKPQKSENQEQGRVTRTGIPKFTESSLTIHSLVSFDSPSSR 449

Query: 787  KVWCSSQVSIRHGNGGNLPQNEFLGTLSTVLDKKDGRCS------SVPVAENNSHAKQEL 626
            K   S QV + H  G    Q   + + + + +++DG  S       VP + + SHA  + 
Sbjct: 450  KAETSFQVDVHHRTGVRPSQKNLVDSFNAI-NERDGYGSLIIPDGPVPRSPDLSHANLKF 508

Query: 625  HTSSSSNLE----EKNKVERRSVDNKATKDNDAKSEIQSLVKLNLKLLSRDKKLEVDAFK 458
              SS    +     K +VE  S  NKA +D+DAKSEIQSLVKLNLKL+S+DK+L VD FK
Sbjct: 509  GASSLCKEDLLHRPKGRVEIGSAKNKARRDDDAKSEIQSLVKLNLKLISKDKQLGVDTFK 568

Query: 457  EVARLATHAILAACGIGHPKPGVRSFPSSICSHVDKVEQVRRSTLMPSSCRECFFVFIKD 278
            EVARLATH ILAACG+ H K  VRSFP+S+C+H ++V+Q+ +STLMP SCRECF+ ++KD
Sbjct: 569  EVARLATHTILAACGLEHSKSCVRSFPTSMCTHSEQVQQLHKSTLMPRSCRECFYAYVKD 628

Query: 277  VVNTFMVEKL 248
            VVN   VEK+
Sbjct: 629  VVNFITVEKM 638


>ref|XP_002514596.1| splicing factor, arginine/serine-rich 2,rnap interacting protein,
            putative [Ricinus communis] gi|223546200|gb|EEF47702.1|
            splicing factor, arginine/serine-rich 2,rnap interacting
            protein, putative [Ricinus communis]
          Length = 632

 Score =  298 bits (762), Expect = 5e-78
 Identities = 213/588 (36%), Positives = 285/588 (48%), Gaps = 35/588 (5%)
 Frame = -3

Query: 2029 FCFVCIMEWAKVESRCPMCKRRFAAIRRPPKDGVFPAERIVNVPVRDQAYHYFGNDTTGP 1850
            FCF+CIMEWAK+ESRCPMCKRRF  I RPPKDGVFP+ER+VNVP RDQ YH FGN T  P
Sbjct: 70   FCFICIMEWAKIESRCPMCKRRFNNIHRPPKDGVFPSERLVNVPKRDQVYHLFGNTTVEP 129

Query: 1849 PDPYSEVQCTVCQNTSNXXXXXXXXXXXSASHTYCVGLGATVPEGDWFCQDCTLLRDEHS 1670
             DPY++VQC++C    +           SA+HTYCVGLG TVPE DWFC DC + R EH 
Sbjct: 130  FDPYAQVQCSICHTAEDESLLLLCDLCDSAAHTYCVGLGFTVPECDWFCHDCAVSRTEHE 189

Query: 1669 KDDKDPDCDSQTGSEPNYGNQTKFEKFHQIPSSETRVSI-LDVVREPSLHEAERSSSNRH 1493
               KD D  +QT S  +       E +  + S  T  +         +  +++  S  R 
Sbjct: 190  NFQKDEDNITQTLSVKSEVVLAA-EPYVAVNSQNTSENYNAGAENGANFCQSDNQSIGRP 248

Query: 1492 CLLSTVVPEEGLSVADTIIDHGSGKQSFV----GHGASQLGARTLGHCRNVHGRIRALRE 1325
               S+ VP     +++   D    +++      G    Q  ARTL  CR+VH  +RALRE
Sbjct: 249  RARSSQVPSPSERLSNLADDMSQPRETTTRTGPGQETPQSDARTLRRCRDVHSYVRALRE 308

Query: 1324 NWNRFRQGSLSFSSNSNDKYGVGSVTRGRXXXXXXXXXXXXXXXXQKGSSCNT------- 1166
            NW+  R GSL FSS+S     V S +R                     SS +        
Sbjct: 309  NWDALRSGSLRFSSSS-----VESCSRSIAKCYTPVVTHESSGQSHTMSSTSGQQLTIND 363

Query: 1165 -LPNSGTED-----IDKAWKMMDVAKSIEKDRRRTNIAHHASKGSKHPLRKVNTPKEAD- 1007
             LP +  +D       KAWKMM  AKSI +             GSK+P  K N  ++A  
Sbjct: 364  GLPGTFAQDRHSHDAKKAWKMMAKAKSIHQ-------------GSKNPSTKGNASRKATG 410

Query: 1006 SGTSKVLTSSSIGNKNCDGLKLEKHYQDCAIVKTNDRHKYHMFKGGK-----PSEVSKLI 842
            S  S  +  S  G        +EK ++  +  +  ++H +   K          E+ +  
Sbjct: 411  SSCSLHMLRSQFGTSGMVNFTVEKQHKRYSPERQTEKHVFSKLKMQNHGINFSKEIVRPG 470

Query: 841  EGYPDTRSIVYSELSSSMKVWCSSQV----------SIRHGNGGNLPQNEFLGTLSTVLD 692
            +  P T    +S   +S KV  SSQ           ++R  +     Q    G L  ++ 
Sbjct: 471  DNLPTTSG--FSASITSWKVQTSSQTLENQEPARQQNLRRASSKFTNQQIGSGRLMPLVG 528

Query: 691  KKDGRCSSVPVAENNSHAKQELHTSSSSNLEEKN-KVERRSVDNKATKDNDAKSEIQSLV 515
               G   SV     N+ A      S   N+ E + ++ +   ++K   D++AKSEIQSLV
Sbjct: 529  PVSGTSKSV-----NTKADISESFSCKVNVPEGDVRLGKGGTESKPRNDDNAKSEIQSLV 583

Query: 514  KLNLKLLSRDKKLEVDAFKEVARLATHAILAACGIGHPKPGVRSFPSS 371
            KLN+ LL   K+L VD FKEVARLAT+ ILAACG  H +    SFPSS
Sbjct: 584  KLNMNLLKGVKQLGVDEFKEVARLATYTILAACGFKHSRHVFHSFPSS 631


>ref|XP_004171857.1| PREDICTED: uncharacterized protein LOC101229274 [Cucumis sativus]
          Length = 398

 Score =  207 bits (528), Expect = 7e-51
 Identities = 127/352 (36%), Positives = 176/352 (50%), Gaps = 6/352 (1%)
 Frame = -3

Query: 2029 FCFVCIMEWAKVESRCPMCKRRFAAIRRPPKDGVFPAERIVNVPVRDQAYHYFGNDTTGP 1850
            FCFVCIMEWA++ESRCP CK RF  + R  KD     ERIVN+P+R+Q     G+   G 
Sbjct: 78   FCFVCIMEWARIESRCPACKGRFTVVHRIAKDPCRLRERIVNIPMRNQDQSASGSARIG- 136

Query: 1849 PDPYSEVQCTVCQNTSNXXXXXXXXXXXSASHTYCVGLGATVPEGDWFCQDCTLLRDEHS 1670
             DPY+E  CTVC+   +           SA+HT+CVGLGA VPEGDW+C DCT+ R +H+
Sbjct: 137  -DPYAETCCTVCKGMEDEGLMLLCDLCDSAAHTFCVGLGANVPEGDWYCHDCTIARAQHT 195

Query: 1669 KDDKDPDCDSQTGSEPNYGNQTKFEKFHQIPSSETRVSILDVVREPSLHEAERSSSNRHC 1490
              + D                T F K +Q  + E R++I D+V+E S      S + R  
Sbjct: 196  DTELD----------------TSFIKQNQTTTVEPRIAISDIVKESSAQTV--SITRRGA 237

Query: 1489 LL------STVVPEEGLSVADTIIDHGSGKQSFVGHGASQLGARTLGHCRNVHGRIRALR 1328
            LL       ++VP    SVA   +    GK       A+   ARTL  CRN+H  IRALR
Sbjct: 238  LLHSNREPPSIVPSSRRSVAQKSLPSRGGK-------AAGTSARTLHRCRNIHSYIRALR 290

Query: 1327 ENWNRFRQGSLSFSSNSNDKYGVGSVTRGRXXXXXXXXXXXXXXXXQKGSSCNTLPNSGT 1148
            +NW+  R+GSL F ++S+  Y   S  R                     ++     N  +
Sbjct: 291  DNWDAVRKGSLRFPASSSSTYCGNSSKRDTGGAELINKQTNQPHAISLQATTLPESNGNS 350

Query: 1147 EDIDKAWKMMDVAKSIEKDRRRTNIAHHASKGSKHPLRKVNTPKEADSGTSK 992
             D++KAW+MM++AK+               +  +HP+ +  T K  DS T+K
Sbjct: 351  CDVEKAWRMMEIAKA--------KSIREGDQTLRHPVSRQITTKTKDSHTAK 394


>ref|XP_004137609.1| PREDICTED: uncharacterized protein LOC101204928 [Cucumis sativus]
          Length = 375

 Score =  202 bits (513), Expect = 4e-49
 Identities = 119/315 (37%), Positives = 163/315 (51%), Gaps = 6/315 (1%)
 Frame = -3

Query: 2029 FCFVCIMEWAKVESRCPMCKRRFAAIRRPPKDGVFPAERIVNVPVRDQAYHYFGNDTTGP 1850
            FCFVCIMEWA++ESRCP CK RF  + R  KD     ERIVN+P+R+Q     G+   G 
Sbjct: 78   FCFVCIMEWARIESRCPACKGRFTVVHRIAKDPCRLRERIVNIPMRNQDQSASGSARIG- 136

Query: 1849 PDPYSEVQCTVCQNTSNXXXXXXXXXXXSASHTYCVGLGATVPEGDWFCQDCTLLRDEHS 1670
             DPY+E  CTVC+   +           SA+HT+CVGLGA VPEGDW+C DCT+ R +H+
Sbjct: 137  -DPYAETCCTVCKGMEDEGLMLLCDLCDSAAHTFCVGLGANVPEGDWYCHDCTIARAQHT 195

Query: 1669 KDDKDPDCDSQTGSEPNYGNQTKFEKFHQIPSSETRVSILDVVREPSLHEAERSSSNRHC 1490
              + D                T F K +Q  + E R++I D+V+E S      S + R  
Sbjct: 196  DTELD----------------TSFIKQNQTTTVEPRIAISDIVKESSAQTV--SITRRGA 237

Query: 1489 LL------STVVPEEGLSVADTIIDHGSGKQSFVGHGASQLGARTLGHCRNVHGRIRALR 1328
            LL       ++VP    SVA   +    GK       A+   ARTL  CRN+H  IRALR
Sbjct: 238  LLHSNREPPSIVPSSRRSVAQKSLPSRGGK-------AAGTSARTLHRCRNIHSYIRALR 290

Query: 1327 ENWNRFRQGSLSFSSNSNDKYGVGSVTRGRXXXXXXXXXXXXXXXXQKGSSCNTLPNSGT 1148
            +NW+  R+GSL F ++S+  Y   S  R                     ++     N  +
Sbjct: 291  DNWDAVRKGSLRFPASSSSTYCGNSSKRDTGGAELINKQTNQPHAISLQATTLPESNGNS 350

Query: 1147 EDIDKAWKMMDVAKS 1103
             D++KAW+MM++AK+
Sbjct: 351  CDVEKAWRMMEIAKA 365


>gb|EEC80403.1| hypothetical protein OsI_22555 [Oryza sativa Indica Group]
          Length = 1223

 Score =  178 bits (452), Expect = 4e-42
 Identities = 160/545 (29%), Positives = 239/545 (43%), Gaps = 57/545 (10%)
 Frame = -3

Query: 2029 FCFVCIMEWAKVESRCPMCKRRFAAIRRPPKDGVFPAERIVNVPVRDQAYHYFGN-DTTG 1853
            FCFVCIM WA+VESRCP CK RF  I RPP  G FP++R+V VP R+QA +  GN  +T 
Sbjct: 48   FCFVCIMAWARVESRCPFCKARFRTITRPPVPGRFPSQRVVAVPERNQACNPSGNGSSTV 107

Query: 1852 PPDPYSEVQCTVCQNTSNXXXXXXXXXXXSASHTYCVGLGATVPEGDWFCQDCTLLRDEH 1673
              D Y+   C+VC  +++           SA HTYC GLG  +PEGDWFC DC   ++EH
Sbjct: 108  DADLYANTSCSVCNLSNDDELLMLCELCDSAVHTYCAGLGTEIPEGDWFCTDCMTAKEEH 167

Query: 1672 SKDDKDPDCDSQTGSEPNYGNQTKFEKFHQIPSSE--TRVSILDVVRE---PSLHEAERS 1508
            S+ + D D  S  G         +F+   ++P ++     SI D+V E   P+L +    
Sbjct: 168  SRCEIDDDNSSDHG---------EFKITIEVPIADPVAAPSISDIVDEGHSPNLVQRSSV 218

Query: 1507 SSNRHCLLSTV--------------------------------VPEEGLSVADTIIDHGS 1424
             SNR  +   V                                +P +G+SV     +   
Sbjct: 219  QSNRPSISDPVPSIYDIVDDDYTTIPIGRVNARSTRLDSRAERLPSQGISVGPQCPESPQ 278

Query: 1423 GKQS--FVGHGASQL---GARTLGHCRNVHGRIRALRENWNRFRQGSLSFSSN-SNDKYG 1262
             +++     H  S++    ARTL + RN+  RIR LRENW+  R GS+ F++   N + G
Sbjct: 279  ERENSRVCSHARSRIESERARTLRNSRNLGSRIRELRENWSALRSGSIGFATQLHNRRRG 338

Query: 1261 VGSVTRGRXXXXXXXXXXXXXXXXQKGSSCNTLPNSGTEDIDKAWKMMDVAKSIEKDRRR 1082
             G+ T                     G +    P + + D+ KAWKM+++AKS    ++ 
Sbjct: 339  NGAGTCDIEERHRSTTTFMEVAASSSGHAKKISPKN-SSDVHKAWKMLEMAKSSGGKKKP 397

Query: 1081 TNIAHHASKGSKHPLRKVNTPKEADSGTSKVLTSSSIGNKN---CDGL----KLEKHYQD 923
             N    +S     P    N        TS     + +G+KN    DG+      E+H+  
Sbjct: 398  DN---PSSLNCSVPFSMGN------RSTSYSPIDAILGHKNNKLYDGITQKNNAEQHH-- 446

Query: 922  CAIVKTNDRHKYHMFKGGKPSEVSKLIEG--YPDTRSIVYSELSSSMKVWCSS--QVSIR 755
                 TN  +K      G+  ++ +   G  +  T S +  + S + KV  SS  +   R
Sbjct: 447  ----STNMENKPPTMNFGECRKLQEKFHGSAHGRTPSTIMRQESLTGKVSSSSNNEKHNR 502

Query: 754  HGNGGNLPQNEFLGTLSTVLDKKD--GRCSSVPVAENNSHAKQELHTSSSSNLEEKNKVE 581
              N  N P     G    + +     GR  S  + + N + K     +SSSN E+  ++ 
Sbjct: 503  SINMENRPPTVNFGEHRKLQESASVHGRIPSTVMMQENLNGK----VASSSNNEDAGQIF 558

Query: 580  RRSVD 566
              S D
Sbjct: 559  ESSRD 563



 Score = 58.2 bits (139), Expect = 8e-06
 Identities = 59/245 (24%), Positives = 105/245 (42%), Gaps = 11/245 (4%)
 Frame = -3

Query: 1105 SIEKDRRRTNIAHHASKGSKH--PLRKVNTPKEADSGTSKVLT-SSSIGNKNCDGLKLEK 935
            +I +    T     +S   KH   +   N P   + G  + L  S+S+  +    + +++
Sbjct: 480  TIMRQESLTGKVSSSSNNEKHNRSINMENRPPTVNFGEHRKLQESASVHGRIPSTVMMQE 539

Query: 934  HYQDCAIVKTNDRHKYHMFKGGKP---SEVSKLIEGYPDTRSIVYSELSSSMKVWCSSQV 764
            +        +N+     +F+  +     E SK +   P    + +S LS    V  S Q 
Sbjct: 540  NLNGKVASSSNNEDAGQIFESSRDVSRPEKSKPVVSCP----LTFSLLSGQSMVTSSQQ- 594

Query: 763  SIRHGNGGNLPQNEFLGTLSTVLDKKDGRCSSVPVAENNSHAKQELHTSSSSNLEEKNKV 584
             +R G   +          + ++  ++   ++  +    + A  ++  S    LE K K+
Sbjct: 595  -LRPGWSQS----------TEMVSSQEPSATAASIDIGTAGANDKVKGSRPDRLERKRKL 643

Query: 583  ERRSVDNKATKDNDA-----KSEIQSLVKLNLKLLSRDKKLEVDAFKEVARLATHAILAA 419
               + D+K +K + +     KS+I  L    LKLL+ DK    D FKEVAR ATH +LA+
Sbjct: 644  GSETHDDKGSKRSMSSCKIRKSDISFLAIRELKLLNIDKTYGSDTFKEVARAATHTVLAS 703

Query: 418  CGIGH 404
            CG+ H
Sbjct: 704  CGLEH 708


Top