BLASTX nr result

ID: Panax21_contig00024208 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00024208
         (764 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002319824.1| predicted protein [Populus trichocarpa] gi|2...   251   1e-64
gb|ABK94006.1| unknown [Populus trichocarpa]                          248   1e-63
ref|XP_002281441.1| PREDICTED: protein LHCP TRANSLOCATION DEFECT...   246   3e-63
emb|CAN65357.1| hypothetical protein VITISV_041274 [Vitis vinifera]   246   4e-63
ref|XP_002864707.1| hypothetical protein ARALYDRAFT_919322 [Arab...   235   7e-60

>ref|XP_002319824.1| predicted protein [Populus trichocarpa] gi|222858200|gb|EEE95747.1|
           predicted protein [Populus trichocarpa]
          Length = 171

 Score =  251 bits (641), Expect = 1e-64
 Identities = 124/153 (81%), Positives = 138/153 (90%)
 Frame = -3

Query: 624 PYHSELNSQFMGVQKRLGWFRPSRIGPSSAGSRATCWFKFGKNGVDAEKAGIYGSQSRND 445
           P+  +LNSQF+G+Q  +GW RP RIGPS+ GSRA CWFKFGKNGVDAE AGIYGSQ+R+D
Sbjct: 21  PFLPKLNSQFLGLQSNVGWLRPCRIGPSN-GSRAKCWFKFGKNGVDAEGAGIYGSQTRDD 79

Query: 444 FDRDDVEQYFNYMGMLAVEGTYDKMEALLSQNIHPVDILLILAATEGDKPKIEELLRAGA 265
           FDRDDVEQYFNYMGMLAVEGTYDKMEALLSQNIHPVDILL+LAA+EGDKPKIEELLRAGA
Sbjct: 80  FDRDDVEQYFNYMGMLAVEGTYDKMEALLSQNIHPVDILLMLAASEGDKPKIEELLRAGA 139

Query: 264 DYTVKDADGQTALDRAINDEIKDFILGFSAQKA 166
            Y +KDADG+TALDRA N+E KDFILG S +KA
Sbjct: 140 GYDIKDADGRTALDRA-NEETKDFILGLSVRKA 171


>gb|ABK94006.1| unknown [Populus trichocarpa]
          Length = 171

 Score =  248 bits (633), Expect = 1e-63
 Identities = 123/153 (80%), Positives = 137/153 (89%)
 Frame = -3

Query: 624 PYHSELNSQFMGVQKRLGWFRPSRIGPSSAGSRATCWFKFGKNGVDAEKAGIYGSQSRND 445
           P+  +LNSQF+G+Q  +GW RP RIGPS+ GSRA CWFKFGKNGVDAE  GIYGSQ+R+D
Sbjct: 21  PFLPKLNSQFLGLQSNVGWLRPCRIGPSN-GSRAKCWFKFGKNGVDAEGDGIYGSQTRDD 79

Query: 444 FDRDDVEQYFNYMGMLAVEGTYDKMEALLSQNIHPVDILLILAATEGDKPKIEELLRAGA 265
           FDRDDVEQYFNYMGMLAVEGTYDKMEALLSQNIHPVDILL+LAA+EGDKPKIEELLRAGA
Sbjct: 80  FDRDDVEQYFNYMGMLAVEGTYDKMEALLSQNIHPVDILLMLAASEGDKPKIEELLRAGA 139

Query: 264 DYTVKDADGQTALDRAINDEIKDFILGFSAQKA 166
            Y +KDADG+TALDRA N+E KDFILG S +KA
Sbjct: 140 VYDIKDADGRTALDRA-NEETKDFILGLSVRKA 171


>ref|XP_002281441.1| PREDICTED: protein LHCP TRANSLOCATION DEFECT [Vitis vinifera]
           gi|297735982|emb|CBI23956.3| unnamed protein product
           [Vitis vinifera]
          Length = 172

 Score =  246 bits (629), Expect = 3e-63
 Identities = 129/192 (67%), Positives = 148/192 (77%), Gaps = 1/192 (0%)
 Frame = -3

Query: 738 MASIPCTASATIIQLNFASKPNNXXXXXXXXXXXXXSTPYHSEL-NSQFMGVQKRLGWFR 562
           MASIPCT       L F SKP                +P +  +  SQ +G+ ++L W  
Sbjct: 1   MASIPCTT-----HLLFTSKPQ--------------ISPSNPPIFTSQLLGIPRKLSWST 41

Query: 561 PSRIGPSSAGSRATCWFKFGKNGVDAEKAGIYGSQSRNDFDRDDVEQYFNYMGMLAVEGT 382
           P+R+GPS+ GSRATCWF+FG  GVDAE AGIYGSQ+R+DFDRDDVEQYFNYMGMLAVEGT
Sbjct: 42  PTRLGPSN-GSRATCWFRFGNRGVDAEGAGIYGSQTRDDFDRDDVEQYFNYMGMLAVEGT 100

Query: 381 YDKMEALLSQNIHPVDILLILAATEGDKPKIEELLRAGADYTVKDADGQTALDRAINDEI 202
           YDKMEALLSQNIHPVDILL++AA+EGD+PKIEELLRAGA YTVKDADG+TAL+RA NDEI
Sbjct: 101 YDKMEALLSQNIHPVDILLMMAASEGDQPKIEELLRAGASYTVKDADGRTALERAANDEI 160

Query: 201 KDFILGFSAQKA 166
           KD IL FS QKA
Sbjct: 161 KDLILNFSTQKA 172


>emb|CAN65357.1| hypothetical protein VITISV_041274 [Vitis vinifera]
          Length = 172

 Score =  246 bits (628), Expect = 4e-63
 Identities = 129/192 (67%), Positives = 148/192 (77%), Gaps = 1/192 (0%)
 Frame = -3

Query: 738 MASIPCTASATIIQLNFASKPNNXXXXXXXXXXXXXSTPYHSEL-NSQFMGVQKRLGWFR 562
           MASIPCT       L F SKP                +P +  +  SQ +G+ ++L W  
Sbjct: 1   MASIPCTT-----HLLFTSKPQ--------------ISPSNPPIFTSQXLGIPRKLSWST 41

Query: 561 PSRIGPSSAGSRATCWFKFGKNGVDAEKAGIYGSQSRNDFDRDDVEQYFNYMGMLAVEGT 382
           P+R+GPS+ GSRATCWF+FG  GVDAE AGIYGSQ+R+DFDRDDVEQYFNYMGMLAVEGT
Sbjct: 42  PTRLGPSN-GSRATCWFRFGNRGVDAEGAGIYGSQTRDDFDRDDVEQYFNYMGMLAVEGT 100

Query: 381 YDKMEALLSQNIHPVDILLILAATEGDKPKIEELLRAGADYTVKDADGQTALDRAINDEI 202
           YDKMEALLSQNIHPVDILL++AA+EGD+PKIEELLRAGA YTVKDADG+TAL+RA NDEI
Sbjct: 101 YDKMEALLSQNIHPVDILLMMAASEGDQPKIEELLRAGASYTVKDADGRTALERAANDEI 160

Query: 201 KDFILGFSAQKA 166
           KD IL FS QKA
Sbjct: 161 KDLILNFSTQKA 172


>ref|XP_002864707.1| hypothetical protein ARALYDRAFT_919322 [Arabidopsis lyrata subsp.
           lyrata] gi|297310542|gb|EFH40966.1| hypothetical protein
           ARALYDRAFT_919322 [Arabidopsis lyrata subsp. lyrata]
          Length = 177

 Score =  235 bits (600), Expect = 7e-60
 Identities = 115/148 (77%), Positives = 134/148 (90%)
 Frame = -3

Query: 609 LNSQFMGVQKRLGWFRPSRIGPSSAGSRATCWFKFGKNGVDAEKAGIYGSQSRNDFDRDD 430
           L+S+F+G +      RP+R+GPS+ GSR TCWFKFGKNGVDAE AGIYGSQSR+DFDRDD
Sbjct: 31  LSSRFLGTRNLKLQIRPARLGPSN-GSRTTCWFKFGKNGVDAENAGIYGSQSRDDFDRDD 89

Query: 429 VEQYFNYMGMLAVEGTYDKMEALLSQNIHPVDILLILAATEGDKPKIEELLRAGADYTVK 250
           VEQYFNYMGMLAVEGTY KMEALLS NIHPVDILL+LAATEGD+PKIEELL+AGADY+VK
Sbjct: 90  VEQYFNYMGMLAVEGTYSKMEALLSLNIHPVDILLMLAATEGDRPKIEELLKAGADYSVK 149

Query: 249 DADGQTALDRAINDEIKDFILGFSAQKA 166
           DADG+TA+DRA ++EI+D ILG++AQKA
Sbjct: 150 DADGRTAIDRANSEEIRDLILGYNAQKA 177


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