BLASTX nr result
ID: Panax21_contig00024208
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00024208 (764 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002319824.1| predicted protein [Populus trichocarpa] gi|2... 251 1e-64 gb|ABK94006.1| unknown [Populus trichocarpa] 248 1e-63 ref|XP_002281441.1| PREDICTED: protein LHCP TRANSLOCATION DEFECT... 246 3e-63 emb|CAN65357.1| hypothetical protein VITISV_041274 [Vitis vinifera] 246 4e-63 ref|XP_002864707.1| hypothetical protein ARALYDRAFT_919322 [Arab... 235 7e-60 >ref|XP_002319824.1| predicted protein [Populus trichocarpa] gi|222858200|gb|EEE95747.1| predicted protein [Populus trichocarpa] Length = 171 Score = 251 bits (641), Expect = 1e-64 Identities = 124/153 (81%), Positives = 138/153 (90%) Frame = -3 Query: 624 PYHSELNSQFMGVQKRLGWFRPSRIGPSSAGSRATCWFKFGKNGVDAEKAGIYGSQSRND 445 P+ +LNSQF+G+Q +GW RP RIGPS+ GSRA CWFKFGKNGVDAE AGIYGSQ+R+D Sbjct: 21 PFLPKLNSQFLGLQSNVGWLRPCRIGPSN-GSRAKCWFKFGKNGVDAEGAGIYGSQTRDD 79 Query: 444 FDRDDVEQYFNYMGMLAVEGTYDKMEALLSQNIHPVDILLILAATEGDKPKIEELLRAGA 265 FDRDDVEQYFNYMGMLAVEGTYDKMEALLSQNIHPVDILL+LAA+EGDKPKIEELLRAGA Sbjct: 80 FDRDDVEQYFNYMGMLAVEGTYDKMEALLSQNIHPVDILLMLAASEGDKPKIEELLRAGA 139 Query: 264 DYTVKDADGQTALDRAINDEIKDFILGFSAQKA 166 Y +KDADG+TALDRA N+E KDFILG S +KA Sbjct: 140 GYDIKDADGRTALDRA-NEETKDFILGLSVRKA 171 >gb|ABK94006.1| unknown [Populus trichocarpa] Length = 171 Score = 248 bits (633), Expect = 1e-63 Identities = 123/153 (80%), Positives = 137/153 (89%) Frame = -3 Query: 624 PYHSELNSQFMGVQKRLGWFRPSRIGPSSAGSRATCWFKFGKNGVDAEKAGIYGSQSRND 445 P+ +LNSQF+G+Q +GW RP RIGPS+ GSRA CWFKFGKNGVDAE GIYGSQ+R+D Sbjct: 21 PFLPKLNSQFLGLQSNVGWLRPCRIGPSN-GSRAKCWFKFGKNGVDAEGDGIYGSQTRDD 79 Query: 444 FDRDDVEQYFNYMGMLAVEGTYDKMEALLSQNIHPVDILLILAATEGDKPKIEELLRAGA 265 FDRDDVEQYFNYMGMLAVEGTYDKMEALLSQNIHPVDILL+LAA+EGDKPKIEELLRAGA Sbjct: 80 FDRDDVEQYFNYMGMLAVEGTYDKMEALLSQNIHPVDILLMLAASEGDKPKIEELLRAGA 139 Query: 264 DYTVKDADGQTALDRAINDEIKDFILGFSAQKA 166 Y +KDADG+TALDRA N+E KDFILG S +KA Sbjct: 140 VYDIKDADGRTALDRA-NEETKDFILGLSVRKA 171 >ref|XP_002281441.1| PREDICTED: protein LHCP TRANSLOCATION DEFECT [Vitis vinifera] gi|297735982|emb|CBI23956.3| unnamed protein product [Vitis vinifera] Length = 172 Score = 246 bits (629), Expect = 3e-63 Identities = 129/192 (67%), Positives = 148/192 (77%), Gaps = 1/192 (0%) Frame = -3 Query: 738 MASIPCTASATIIQLNFASKPNNXXXXXXXXXXXXXSTPYHSEL-NSQFMGVQKRLGWFR 562 MASIPCT L F SKP +P + + SQ +G+ ++L W Sbjct: 1 MASIPCTT-----HLLFTSKPQ--------------ISPSNPPIFTSQLLGIPRKLSWST 41 Query: 561 PSRIGPSSAGSRATCWFKFGKNGVDAEKAGIYGSQSRNDFDRDDVEQYFNYMGMLAVEGT 382 P+R+GPS+ GSRATCWF+FG GVDAE AGIYGSQ+R+DFDRDDVEQYFNYMGMLAVEGT Sbjct: 42 PTRLGPSN-GSRATCWFRFGNRGVDAEGAGIYGSQTRDDFDRDDVEQYFNYMGMLAVEGT 100 Query: 381 YDKMEALLSQNIHPVDILLILAATEGDKPKIEELLRAGADYTVKDADGQTALDRAINDEI 202 YDKMEALLSQNIHPVDILL++AA+EGD+PKIEELLRAGA YTVKDADG+TAL+RA NDEI Sbjct: 101 YDKMEALLSQNIHPVDILLMMAASEGDQPKIEELLRAGASYTVKDADGRTALERAANDEI 160 Query: 201 KDFILGFSAQKA 166 KD IL FS QKA Sbjct: 161 KDLILNFSTQKA 172 >emb|CAN65357.1| hypothetical protein VITISV_041274 [Vitis vinifera] Length = 172 Score = 246 bits (628), Expect = 4e-63 Identities = 129/192 (67%), Positives = 148/192 (77%), Gaps = 1/192 (0%) Frame = -3 Query: 738 MASIPCTASATIIQLNFASKPNNXXXXXXXXXXXXXSTPYHSEL-NSQFMGVQKRLGWFR 562 MASIPCT L F SKP +P + + SQ +G+ ++L W Sbjct: 1 MASIPCTT-----HLLFTSKPQ--------------ISPSNPPIFTSQXLGIPRKLSWST 41 Query: 561 PSRIGPSSAGSRATCWFKFGKNGVDAEKAGIYGSQSRNDFDRDDVEQYFNYMGMLAVEGT 382 P+R+GPS+ GSRATCWF+FG GVDAE AGIYGSQ+R+DFDRDDVEQYFNYMGMLAVEGT Sbjct: 42 PTRLGPSN-GSRATCWFRFGNRGVDAEGAGIYGSQTRDDFDRDDVEQYFNYMGMLAVEGT 100 Query: 381 YDKMEALLSQNIHPVDILLILAATEGDKPKIEELLRAGADYTVKDADGQTALDRAINDEI 202 YDKMEALLSQNIHPVDILL++AA+EGD+PKIEELLRAGA YTVKDADG+TAL+RA NDEI Sbjct: 101 YDKMEALLSQNIHPVDILLMMAASEGDQPKIEELLRAGASYTVKDADGRTALERAANDEI 160 Query: 201 KDFILGFSAQKA 166 KD IL FS QKA Sbjct: 161 KDLILNFSTQKA 172 >ref|XP_002864707.1| hypothetical protein ARALYDRAFT_919322 [Arabidopsis lyrata subsp. lyrata] gi|297310542|gb|EFH40966.1| hypothetical protein ARALYDRAFT_919322 [Arabidopsis lyrata subsp. lyrata] Length = 177 Score = 235 bits (600), Expect = 7e-60 Identities = 115/148 (77%), Positives = 134/148 (90%) Frame = -3 Query: 609 LNSQFMGVQKRLGWFRPSRIGPSSAGSRATCWFKFGKNGVDAEKAGIYGSQSRNDFDRDD 430 L+S+F+G + RP+R+GPS+ GSR TCWFKFGKNGVDAE AGIYGSQSR+DFDRDD Sbjct: 31 LSSRFLGTRNLKLQIRPARLGPSN-GSRTTCWFKFGKNGVDAENAGIYGSQSRDDFDRDD 89 Query: 429 VEQYFNYMGMLAVEGTYDKMEALLSQNIHPVDILLILAATEGDKPKIEELLRAGADYTVK 250 VEQYFNYMGMLAVEGTY KMEALLS NIHPVDILL+LAATEGD+PKIEELL+AGADY+VK Sbjct: 90 VEQYFNYMGMLAVEGTYSKMEALLSLNIHPVDILLMLAATEGDRPKIEELLKAGADYSVK 149 Query: 249 DADGQTALDRAINDEIKDFILGFSAQKA 166 DADG+TA+DRA ++EI+D ILG++AQKA Sbjct: 150 DADGRTAIDRANSEEIRDLILGYNAQKA 177