BLASTX nr result

ID: Panax21_contig00024199 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00024199
         (975 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326818.1| predicted protein [Populus trichocarpa] gi|2...   245   1e-62
emb|CBI16593.3| unnamed protein product [Vitis vinifera]              244   2e-62
ref|XP_002275490.1| PREDICTED: F-box protein At5g07670 [Vitis vi...   244   2e-62
ref|XP_002511646.1| F-box/LRR-repeat protein, putative [Ricinus ...   239   6e-61
ref|XP_002302516.1| predicted protein [Populus trichocarpa] gi|2...   236   6e-60

>ref|XP_002326818.1| predicted protein [Populus trichocarpa] gi|222835133|gb|EEE73568.1|
           predicted protein [Populus trichocarpa]
          Length = 413

 Score =  245 bits (626), Expect = 1e-62
 Identities = 113/158 (71%), Positives = 137/158 (86%)
 Frame = -1

Query: 975 LQSCKNIDTSPGPDEHLGSCSALEELHLQRCQLRDKQGVRALFLACRSVRELVFEDCWGL 796
           LQSCK+ID+SPG  EHLGSC  LEELHLQ+CQ+RDKQ V+ALFL C++VRE+V ++CWGL
Sbjct: 252 LQSCKSIDSSPGLPEHLGSCPTLEELHLQQCQMRDKQAVKALFLICKTVREIVLQNCWGL 311

Query: 795 DNATFGNASICRRVTLLSLEGCSLLTVDCLDPVVLSWKDLKRLRVVSCNNIKDSEITSEL 616
           ++  F  A++CRR  LLSLEGCSLLT  CL+ V+L+WK+L+RL V+SCNNIKDSEIT +L
Sbjct: 312 EDEVFATATVCRRARLLSLEGCSLLTTGCLESVILNWKELERLTVISCNNIKDSEITPDL 371

Query: 615 AALFSVLKELKWRPDSRSLLSSGLAGTGVGQKGGRSFQ 502
           A LFSVLKELKWRPDS+SLLS+GLAGTGVG KGGR F+
Sbjct: 372 ATLFSVLKELKWRPDSKSLLSAGLAGTGVGNKGGRFFK 409


>emb|CBI16593.3| unnamed protein product [Vitis vinifera]
          Length = 345

 Score =  244 bits (623), Expect = 2e-62
 Identities = 117/159 (73%), Positives = 135/159 (84%)
 Frame = -1

Query: 975 LQSCKNIDTSPGPDEHLGSCSALEELHLQRCQLRDKQGVRALFLACRSVRELVFEDCWGL 796
           LQSCK+ID SPG D+HLGSC  LE LHLQRCQ+RDKQ  RALFL C +VRE+V +DCWGL
Sbjct: 186 LQSCKSIDASPGSDQHLGSCPTLETLHLQRCQMRDKQSTRALFLVCEAVREIVLQDCWGL 245

Query: 795 DNATFGNASICRRVTLLSLEGCSLLTVDCLDPVVLSWKDLKRLRVVSCNNIKDSEITSEL 616
           ++ TFG A+ICRR+  LSLEGCSLLTV+ LD VV SWK+L+RLRVVSCNNIKDSE+T  L
Sbjct: 246 EDETFGIATICRRLKSLSLEGCSLLTVEGLDSVVHSWKELQRLRVVSCNNIKDSEVTPAL 305

Query: 615 AALFSVLKELKWRPDSRSLLSSGLAGTGVGQKGGRSFQR 499
           A LFSVLKELKWRPDSRSLLSS L  TG+G+KGG+ F+R
Sbjct: 306 ATLFSVLKELKWRPDSRSLLSSSLGETGMGKKGGKFFKR 344


>ref|XP_002275490.1| PREDICTED: F-box protein At5g07670 [Vitis vinifera]
          Length = 473

 Score =  244 bits (623), Expect = 2e-62
 Identities = 117/159 (73%), Positives = 135/159 (84%)
 Frame = -1

Query: 975 LQSCKNIDTSPGPDEHLGSCSALEELHLQRCQLRDKQGVRALFLACRSVRELVFEDCWGL 796
           LQSCK+ID SPG D+HLGSC  LE LHLQRCQ+RDKQ  RALFL C +VRE+V +DCWGL
Sbjct: 314 LQSCKSIDASPGSDQHLGSCPTLETLHLQRCQMRDKQSTRALFLVCEAVREIVLQDCWGL 373

Query: 795 DNATFGNASICRRVTLLSLEGCSLLTVDCLDPVVLSWKDLKRLRVVSCNNIKDSEITSEL 616
           ++ TFG A+ICRR+  LSLEGCSLLTV+ LD VV SWK+L+RLRVVSCNNIKDSE+T  L
Sbjct: 374 EDETFGIATICRRLKSLSLEGCSLLTVEGLDSVVHSWKELQRLRVVSCNNIKDSEVTPAL 433

Query: 615 AALFSVLKELKWRPDSRSLLSSGLAGTGVGQKGGRSFQR 499
           A LFSVLKELKWRPDSRSLLSS L  TG+G+KGG+ F+R
Sbjct: 434 ATLFSVLKELKWRPDSRSLLSSSLGETGMGKKGGKFFKR 472


>ref|XP_002511646.1| F-box/LRR-repeat protein, putative [Ricinus communis]
           gi|223548826|gb|EEF50315.1| F-box/LRR-repeat protein,
           putative [Ricinus communis]
          Length = 459

 Score =  239 bits (611), Expect = 6e-61
 Identities = 111/158 (70%), Positives = 136/158 (86%)
 Frame = -1

Query: 975 LQSCKNIDTSPGPDEHLGSCSALEELHLQRCQLRDKQGVRALFLACRSVRELVFEDCWGL 796
           L++CK+ID+SPGPDEHLGSC  LEELHLQ+CQ+RDK GV+ALF  C +VRE+VF++CWGL
Sbjct: 298 LKTCKSIDSSPGPDEHLGSCPTLEELHLQQCQMRDKLGVKALFSVCEAVREIVFQNCWGL 357

Query: 795 DNATFGNASICRRVTLLSLEGCSLLTVDCLDPVVLSWKDLKRLRVVSCNNIKDSEITSEL 616
           ++  F  AS+CRRV LLSLEGCS LT   L+ V+L+WK+L+RLRV+SCN IKD+E++  L
Sbjct: 358 EDEVFSTASVCRRVRLLSLEGCSSLTTGGLEAVILNWKELQRLRVMSCNKIKDNEVSPAL 417

Query: 615 AALFSVLKELKWRPDSRSLLSSGLAGTGVGQKGGRSFQ 502
           A+LFSVLKELKWRPDSRSLLSS LAGTGVG KGGR F+
Sbjct: 418 ASLFSVLKELKWRPDSRSLLSSSLAGTGVGNKGGRFFK 455


>ref|XP_002302516.1| predicted protein [Populus trichocarpa] gi|222844242|gb|EEE81789.1|
           predicted protein [Populus trichocarpa]
          Length = 450

 Score =  236 bits (602), Expect = 6e-60
 Identities = 113/158 (71%), Positives = 134/158 (84%)
 Frame = -1

Query: 975 LQSCKNIDTSPGPDEHLGSCSALEELHLQRCQLRDKQGVRALFLACRSVRELVFEDCWGL 796
           LQSCK++D+SPG  EHLGSC  LEELH+QRCQ+RDKQ V+ALFL C++VRE+V ++CW L
Sbjct: 289 LQSCKSVDSSPGLLEHLGSCPTLEELHVQRCQMRDKQAVKALFLVCKTVREIVLQNCWRL 348

Query: 795 DNATFGNASICRRVTLLSLEGCSLLTVDCLDPVVLSWKDLKRLRVVSCNNIKDSEITSEL 616
           ++  F  AS+CRRV LLSLEGCSLLT   L+ V+L+WK+L+RL V S NNIKDSEIT +L
Sbjct: 349 EDEVFAAASVCRRVRLLSLEGCSLLTTGGLESVILNWKELQRLTVTSSNNIKDSEITPDL 408

Query: 615 AALFSVLKELKWRPDSRSLLSSGLAGTGVGQKGGRSFQ 502
           A LFSVLKELKWRPDSRSLLSSGLAGTGVG KGGR F+
Sbjct: 409 ATLFSVLKELKWRPDSRSLLSSGLAGTGVGNKGGRFFK 446


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