BLASTX nr result

ID: Panax21_contig00024189 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00024189
         (721 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI31083.3| unnamed protein product [Vitis vinifera]              397   e-109
ref|XP_002268516.1| PREDICTED: pentatricopeptide repeat-containi...   397   e-109
emb|CAN72260.1| hypothetical protein VITISV_035448 [Vitis vinifera]   390   e-106
ref|XP_002533784.1| pentatricopeptide repeat-containing protein,...   376   e-102
ref|XP_002300553.1| predicted protein [Populus trichocarpa] gi|2...   361   7e-98

>emb|CBI31083.3| unnamed protein product [Vitis vinifera]
          Length = 647

 Score =  397 bits (1021), Expect = e-109
 Identities = 184/237 (77%), Positives = 208/237 (87%)
 Frame = -1

Query: 721 MFACGRYNLVHDFFKKIQKSSIPNALTYKVLVNTHWREGNVDKAVSAVQDMERRGIIGSS 542
           MF CG+YNLVH+FF K+QKSSIPNALTYKVLVNT WREG  D+AV AVQDME+RG++GS+
Sbjct: 208 MFVCGKYNLVHEFFWKVQKSSIPNALTYKVLVNTLWREGKTDEAVLAVQDMEKRGVVGSA 267

Query: 541 GLYYDLARSLCSAGRCQEALMQIDKICRVANKPLVVTYTGLIQACLESGNIQNGVYIFNH 362
            LYYDLAR LCSAGRCQEALMQI+KIC+VANKPLVVTYTGLIQ CL+SGNIQN  +IFN 
Sbjct: 268 ALYYDLARCLCSAGRCQEALMQIEKICKVANKPLVVTYTGLIQVCLDSGNIQNAAFIFNQ 327

Query: 361 MHKFCSPNLVTCNIMLKAYLEHEMFEEAKGLFQKLAESGNHISSKLDYKDRVIPDIYTFN 182
           MH+FCSPNL+TCN+MLKAYLEH MFEEAKGLF K+   GNHISSK DY DRV+PDIYTFN
Sbjct: 328 MHEFCSPNLITCNVMLKAYLEHRMFEEAKGLFGKMLGDGNHISSKSDYNDRVLPDIYTFN 387

Query: 181 LMLDACTIRQRWEDLEFIYKRMLQHGVHFNAKRHLRMILDACRARKMELLETTWKHL 11
            M+DAC   +RW DLE++Y+RML+HG HFNAKRHLR+ILDA RA K ELLETTWK L
Sbjct: 388 TMIDACNAEKRWHDLEYVYERMLRHGFHFNAKRHLRIILDASRAGKEELLETTWKSL 444


>ref|XP_002268516.1| PREDICTED: pentatricopeptide repeat-containing protein At1g30610,
            chloroplastic-like [Vitis vinifera]
          Length = 846

 Score =  397 bits (1021), Expect = e-109
 Identities = 184/237 (77%), Positives = 208/237 (87%)
 Frame = -1

Query: 721  MFACGRYNLVHDFFKKIQKSSIPNALTYKVLVNTHWREGNVDKAVSAVQDMERRGIIGSS 542
            MF CG+YNLVH+FF K+QKSSIPNALTYKVLVNT WREG  D+AV AVQDME+RG++GS+
Sbjct: 484  MFVCGKYNLVHEFFWKVQKSSIPNALTYKVLVNTLWREGKTDEAVLAVQDMEKRGVVGSA 543

Query: 541  GLYYDLARSLCSAGRCQEALMQIDKICRVANKPLVVTYTGLIQACLESGNIQNGVYIFNH 362
             LYYDLAR LCSAGRCQEALMQI+KIC+VANKPLVVTYTGLIQ CL+SGNIQN  +IFN 
Sbjct: 544  ALYYDLARCLCSAGRCQEALMQIEKICKVANKPLVVTYTGLIQVCLDSGNIQNAAFIFNQ 603

Query: 361  MHKFCSPNLVTCNIMLKAYLEHEMFEEAKGLFQKLAESGNHISSKLDYKDRVIPDIYTFN 182
            MH+FCSPNL+TCN+MLKAYLEH MFEEAKGLF K+   GNHISSK DY DRV+PDIYTFN
Sbjct: 604  MHEFCSPNLITCNVMLKAYLEHRMFEEAKGLFGKMLGDGNHISSKSDYNDRVLPDIYTFN 663

Query: 181  LMLDACTIRQRWEDLEFIYKRMLQHGVHFNAKRHLRMILDACRARKMELLETTWKHL 11
             M+DAC   +RW DLE++Y+RML+HG HFNAKRHLR+ILDA RA K ELLETTWK L
Sbjct: 664  TMIDACNAEKRWHDLEYVYERMLRHGFHFNAKRHLRIILDASRAGKEELLETTWKSL 720


>emb|CAN72260.1| hypothetical protein VITISV_035448 [Vitis vinifera]
          Length = 1032

 Score =  390 bits (1003), Expect = e-106
 Identities = 182/237 (76%), Positives = 206/237 (86%)
 Frame = -1

Query: 721  MFACGRYNLVHDFFKKIQKSSIPNALTYKVLVNTHWREGNVDKAVSAVQDMERRGIIGSS 542
            MF CG+YNLVH+FF K+QKSSIPNALTYKVLVNT WREG  D+AV AVQDME+RG++GS+
Sbjct: 670  MFVCGKYNLVHEFFWKVQKSSIPNALTYKVLVNTLWREGKTDEAVLAVQDMEKRGVVGSA 729

Query: 541  GLYYDLARSLCSAGRCQEALMQIDKICRVANKPLVVTYTGLIQACLESGNIQNGVYIFNH 362
             LYYDLAR LC AGRCQEALMQI+KIC+VANKPLVVTYTGLIQACL+SGNIQN  +IFN 
Sbjct: 730  ALYYDLARCLCXAGRCQEALMQIEKICKVANKPLVVTYTGLIQACLDSGNIQNAAFIFNQ 789

Query: 361  MHKFCSPNLVTCNIMLKAYLEHEMFEEAKGLFQKLAESGNHISSKLDYKDRVIPDIYTFN 182
            MH+FCSPNL+TCN+MLKAYLEH MFEEAK LF K+   GN ISSK DY DRV+PDIYTFN
Sbjct: 790  MHEFCSPNLITCNVMLKAYLEHRMFEEAKELFGKMLGDGNRISSKSDYNDRVLPDIYTFN 849

Query: 181  LMLDACTIRQRWEDLEFIYKRMLQHGVHFNAKRHLRMILDACRARKMELLETTWKHL 11
             M+DAC   +RW DLE++Y+RML+HG HFNAKRHLR+ILDA RA K ELLETTWK L
Sbjct: 850  TMIDACBAEKRWHDLEYVYERMLRHGFHFNAKRHLRIILDASRAGKEELLETTWKXL 906


>ref|XP_002533784.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223526285|gb|EEF28597.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 856

 Score =  376 bits (965), Expect = e-102
 Identities = 177/240 (73%), Positives = 200/240 (83%)
 Frame = -1

Query: 721  MFACGRYNLVHDFFKKIQKSSIPNALTYKVLVNTHWREGNVDKAVSAVQDMERRGIIGSS 542
            MFACG+YNLVH+FF+K+QKSSIPNAL YKVLVNT WREG  D+AV AV++MERRGI+G +
Sbjct: 501  MFACGKYNLVHEFFRKVQKSSIPNALVYKVLVNTLWREGKTDEAVLAVEEMERRGIVGFA 560

Query: 541  GLYYDLARSLCSAGRCQEALMQIDKICRVANKPLVVTYTGLIQACLESGNIQNGVYIFNH 362
             LYYDLAR LCSAGRCQEAL+QI+KICRVANKPLVVTYTGLIQACL+SGNI N VYIFN 
Sbjct: 561  ALYYDLARCLCSAGRCQEALLQIEKICRVANKPLVVTYTGLIQACLDSGNIHNAVYIFNQ 620

Query: 361  MHKFCSPNLVTCNIMLKAYLEHEMFEEAKGLFQKLAESGNHISSKLDYKDRVIPDIYTFN 182
            M  FCSPNLVT N+MLKAY EH +FE+AK LF K+ E  NHI    DYK RVIPDIYTFN
Sbjct: 621  MKHFCSPNLVTFNVMLKAYFEHGLFEDAKELFHKMTEDSNHIRGNHDYKVRVIPDIYTFN 680

Query: 181  LMLDACTIRQRWEDLEFIYKRMLQHGVHFNAKRHLRMILDACRARKMELLETTWKHLVQA 2
             MLDAC   + W+D E++Y+RML HG HFN KRHLRMILDA RA K+E LE TWKHL +A
Sbjct: 681  TMLDACISEKSWDDFEYVYRRMLHHGFHFNGKRHLRMILDASRAGKVEPLEMTWKHLARA 740


>ref|XP_002300553.1| predicted protein [Populus trichocarpa] gi|222847811|gb|EEE85358.1|
            predicted protein [Populus trichocarpa]
          Length = 642

 Score =  361 bits (927), Expect = 7e-98
 Identities = 174/263 (66%), Positives = 201/263 (76%), Gaps = 24/263 (9%)
 Frame = -1

Query: 721  MFACGRYNLVHDFFKKIQKSSIPNALTYKVLVNTHWREGNVDKAVSAVQDMERRGIIGSS 542
            M ACG+YNLVH+FFKK+QKSSIPNAL YKVLVNT WREG  ++AV AV+DMERRGI+GS+
Sbjct: 274  MLACGKYNLVHEFFKKVQKSSIPNALVYKVLVNTFWREGKTEEAVLAVKDMERRGIVGSA 333

Query: 541  GLYYDLARSLCSAGRCQEAL------------------------MQIDKICRVANKPLVV 434
             LYYDLAR LC++GRCQEAL                          I+KIC+VANKPLVV
Sbjct: 334  ALYYDLARCLCTSGRCQEALDLVIILCLIYYVSVVHVYLKLNLKNTIEKICKVANKPLVV 393

Query: 433  TYTGLIQACLESGNIQNGVYIFNHMHKFCSPNLVTCNIMLKAYLEHEMFEEAKGLFQKLA 254
            TYTGL+QACL+SGNIQN VYIFN M  FC PNLVTCNIMLKAYLEH +FEEA  LF K+ 
Sbjct: 394  TYTGLVQACLDSGNIQNAVYIFNQMRNFCPPNLVTCNIMLKAYLEHGLFEEANELFNKML 453

Query: 253  ESGNHISSKLDYKDRVIPDIYTFNLMLDACTIRQRWEDLEFIYKRMLQHGVHFNAKRHLR 74
            + GNHIS + DYK RVIPDIYTFN MLDA     +W+D E++Y++ML+HG HFNA RHLR
Sbjct: 454  DDGNHISRRSDYKFRVIPDIYTFNTMLDASIAENKWDDFEYVYQKMLRHGFHFNANRHLR 513

Query: 73   MILDACRARKMELLETTWKHLVQ 5
            M+LDA RA K E+LE TWKHL Q
Sbjct: 514  MVLDASRAGKGEVLEITWKHLAQ 536


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