BLASTX nr result

ID: Panax21_contig00024185 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00024185
         (526 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632957.1| PREDICTED: probable rhamnogalacturonate lyas...    80   1e-13
ref|XP_002317123.1| predicted protein [Populus trichocarpa] gi|2...    79   4e-13
ref|XP_001769727.1| predicted protein [Physcomitrella patens sub...    78   9e-13
ref|XP_004134767.1| PREDICTED: probable rhamnogalacturonate lyas...    77   2e-12
gb|AAR15439.1| nuclear division RFT1-like protein [Sisymbrium irio]    74   1e-11

>ref|XP_003632957.1| PREDICTED: probable rhamnogalacturonate lyase B-like [Vitis
           vinifera] gi|302144126|emb|CBI23231.3| unnamed protein
           product [Vitis vinifera]
          Length = 618

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 34/43 (79%), Positives = 37/43 (86%)
 Frame = +2

Query: 320 YAPFRDGPTVWEIGYPDRTAMGFFVPDVNPKYVNKLFLNSIEK 448
           Y P RDGPTVWEIG+PDRT +GF+VPDVNP Y NKLFLNS EK
Sbjct: 417 YVPIRDGPTVWEIGFPDRTTIGFYVPDVNPMYANKLFLNSPEK 459


>ref|XP_002317123.1| predicted protein [Populus trichocarpa] gi|222860188|gb|EEE97735.1|
           predicted protein [Populus trichocarpa]
          Length = 650

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 32/43 (74%), Positives = 37/43 (86%)
 Frame = +2

Query: 320 YAPFRDGPTVWEIGYPDRTAMGFFVPDVNPKYVNKLFLNSIEK 448
           Y P RDGPT+WEIG+PDRT +GF+VPD NP YVNKLF+NS EK
Sbjct: 432 YVPLRDGPTIWEIGFPDRTGIGFYVPDANPMYVNKLFVNSPEK 474


>ref|XP_001769727.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162679076|gb|EDQ65528.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 631

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 34/45 (75%), Positives = 37/45 (82%)
 Frame = +2

Query: 314 VIYAPFRDGPTVWEIGYPDRTAMGFFVPDVNPKYVNKLFLNSIEK 448
           + Y+  RDGPTVWEIG+PDRTA GFFVPD NPKY NKLFLN  EK
Sbjct: 418 ITYSSPRDGPTVWEIGFPDRTAKGFFVPDANPKYANKLFLNHPEK 462


>ref|XP_004134767.1| PREDICTED: probable rhamnogalacturonate lyase B-like [Cucumis
           sativus] gi|449479483|ref|XP_004155611.1| PREDICTED:
           probable rhamnogalacturonate lyase B-like [Cucumis
           sativus]
          Length = 522

 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 34/43 (79%), Positives = 38/43 (88%)
 Frame = +2

Query: 320 YAPFRDGPTVWEIGYPDRTAMGFFVPDVNPKYVNKLFLNSIEK 448
           Y+P RDGPTVWEIG+PDRTA  F+VPDVNP YVNKLFL+S EK
Sbjct: 319 YSPPRDGPTVWEIGFPDRTANSFYVPDVNPMYVNKLFLHSPEK 361


>gb|AAR15439.1| nuclear division RFT1-like protein [Sisymbrium irio]
          Length = 481

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 37/57 (64%), Positives = 44/57 (77%), Gaps = 6/57 (10%)
 Frame = -3

Query: 161 QIAWMTLPLGVVISIAACVFVFWLQNLSYSNPYAQAILNHG------NMQ*PLYIYS 9
           ++AW+TLPLG+VI+IAAC+FVFW QNLSYS+ YAQAIL HG       M  PLYI S
Sbjct: 48  KVAWVTLPLGIVITIAACIFVFWWQNLSYSDTYAQAILIHGFSCVLELMAEPLYILS 104


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