BLASTX nr result
ID: Panax21_contig00024185
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00024185 (526 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003632957.1| PREDICTED: probable rhamnogalacturonate lyas... 80 1e-13 ref|XP_002317123.1| predicted protein [Populus trichocarpa] gi|2... 79 4e-13 ref|XP_001769727.1| predicted protein [Physcomitrella patens sub... 78 9e-13 ref|XP_004134767.1| PREDICTED: probable rhamnogalacturonate lyas... 77 2e-12 gb|AAR15439.1| nuclear division RFT1-like protein [Sisymbrium irio] 74 1e-11 >ref|XP_003632957.1| PREDICTED: probable rhamnogalacturonate lyase B-like [Vitis vinifera] gi|302144126|emb|CBI23231.3| unnamed protein product [Vitis vinifera] Length = 618 Score = 80.5 bits (197), Expect = 1e-13 Identities = 34/43 (79%), Positives = 37/43 (86%) Frame = +2 Query: 320 YAPFRDGPTVWEIGYPDRTAMGFFVPDVNPKYVNKLFLNSIEK 448 Y P RDGPTVWEIG+PDRT +GF+VPDVNP Y NKLFLNS EK Sbjct: 417 YVPIRDGPTVWEIGFPDRTTIGFYVPDVNPMYANKLFLNSPEK 459 >ref|XP_002317123.1| predicted protein [Populus trichocarpa] gi|222860188|gb|EEE97735.1| predicted protein [Populus trichocarpa] Length = 650 Score = 79.0 bits (193), Expect = 4e-13 Identities = 32/43 (74%), Positives = 37/43 (86%) Frame = +2 Query: 320 YAPFRDGPTVWEIGYPDRTAMGFFVPDVNPKYVNKLFLNSIEK 448 Y P RDGPT+WEIG+PDRT +GF+VPD NP YVNKLF+NS EK Sbjct: 432 YVPLRDGPTIWEIGFPDRTGIGFYVPDANPMYVNKLFVNSPEK 474 >ref|XP_001769727.1| predicted protein [Physcomitrella patens subsp. patens] gi|162679076|gb|EDQ65528.1| predicted protein [Physcomitrella patens subsp. patens] Length = 631 Score = 77.8 bits (190), Expect = 9e-13 Identities = 34/45 (75%), Positives = 37/45 (82%) Frame = +2 Query: 314 VIYAPFRDGPTVWEIGYPDRTAMGFFVPDVNPKYVNKLFLNSIEK 448 + Y+ RDGPTVWEIG+PDRTA GFFVPD NPKY NKLFLN EK Sbjct: 418 ITYSSPRDGPTVWEIGFPDRTAKGFFVPDANPKYANKLFLNHPEK 462 >ref|XP_004134767.1| PREDICTED: probable rhamnogalacturonate lyase B-like [Cucumis sativus] gi|449479483|ref|XP_004155611.1| PREDICTED: probable rhamnogalacturonate lyase B-like [Cucumis sativus] Length = 522 Score = 77.0 bits (188), Expect = 2e-12 Identities = 34/43 (79%), Positives = 38/43 (88%) Frame = +2 Query: 320 YAPFRDGPTVWEIGYPDRTAMGFFVPDVNPKYVNKLFLNSIEK 448 Y+P RDGPTVWEIG+PDRTA F+VPDVNP YVNKLFL+S EK Sbjct: 319 YSPPRDGPTVWEIGFPDRTANSFYVPDVNPMYVNKLFLHSPEK 361 >gb|AAR15439.1| nuclear division RFT1-like protein [Sisymbrium irio] Length = 481 Score = 74.3 bits (181), Expect = 1e-11 Identities = 37/57 (64%), Positives = 44/57 (77%), Gaps = 6/57 (10%) Frame = -3 Query: 161 QIAWMTLPLGVVISIAACVFVFWLQNLSYSNPYAQAILNHG------NMQ*PLYIYS 9 ++AW+TLPLG+VI+IAAC+FVFW QNLSYS+ YAQAIL HG M PLYI S Sbjct: 48 KVAWVTLPLGIVITIAACIFVFWWQNLSYSDTYAQAILIHGFSCVLELMAEPLYILS 104