BLASTX nr result
ID: Panax21_contig00024177
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax21_contig00024177
(1116 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002272083.2| PREDICTED: uncharacterized protein LOC100254... 262 1e-67
ref|XP_002519615.1| lupus la ribonucleoprotein, putative [Ricinu... 211 3e-52
ref|XP_004149652.1| PREDICTED: la-related protein 1-like [Cucumi... 207 5e-51
emb|CBI24386.3| unnamed protein product [Vitis vinifera] 202 1e-49
ref|XP_004165480.1| PREDICTED: LOW QUALITY PROTEIN: la-related p... 202 2e-49
>ref|XP_002272083.2| PREDICTED: uncharacterized protein LOC100254731 [Vitis vinifera]
Length = 903
Score = 262 bits (670), Expect = 1e-67
Identities = 168/380 (44%), Positives = 216/380 (56%), Gaps = 9/380 (2%)
Frame = +2
Query: 2 SSAVEVQDEKVRRRGEWSKWVPASVDKKSSLVEIKTLGQPANKVISDLKSNDVSEDKAIE 181
S+ VEVQ +++RRR EWS+W+PAS++ L + K + D ++N+ ++D
Sbjct: 377 STTVEVQCDRIRRRDEWSRWIPASIEHGLPLKANSPQDRVVEKTVIDHENNESNKDNTTG 436
Query: 182 TSGESDDLFWRQDSLVALSTSDRDAKKLVE-SDAEHNGGKVLFDTQTQPMGEGNPESNMG 358
TS + +L +LV S SD D ++ S+AEHN KV FD Q + G+ +S+ G
Sbjct: 437 TSEGNCELQSNNGNLVLNSPSDGDTLEVSHCSNAEHNSEKVRFDDGAQSLIGGDGDSSDG 496
Query: 359 SNSELHIKIPHHGIIDGSDGVYSKC----KTAKFVDHEIHDSERMTVPADFSAEIQDSPC 526
N E + D S G Y+ C + + H+SE V + F+
Sbjct: 497 LNFESDARFS-----DVSTG-YNPCLDFVQETEATTVVGHESESTEVSSFFAV---GDLS 547
Query: 527 NDFSSTFMFDEEMEHELKATKENKFSSLKSSQMIDDDEEMTVNDHAVERLVIVTQNSRIG 706
NDF+S FM DEE+E E K +K+ SS + ++ D+DEEM VND V RLVIVTQNSR G
Sbjct: 548 NDFASPFMLDEELEPEPKTSKKVDLSSTR--RIDDEDEEMVVNDQDVHRLVIVTQNSRTG 605
Query: 707 EEPRTSVNXXXXXXXXXXXXXNDGLYFYEQELKAQRSNCRRNTLSNETRHGKSR--SYVS 880
E NDGL+FYEQELK + SNCR+N+ S E R G SR S V
Sbjct: 606 EGSGNGAQESKSISNELASAINDGLFFYEQELKTKGSNCRKNSFSFENRDGISRSSSIVP 665
Query: 881 SAAGSIAVENSAGGCGCEVPGNANSRKKLNKGFSKQQ-PIHKQRLFSSTFRNHGTGRTH- 1054
+ ENS G GCE PGN NSR+K NKGF KQQ HKQR F+S FRNHG+GR
Sbjct: 666 GLVNAKTGENSIGSSGCEEPGNCNSRRKQNKGFPKQQASSHKQRFFTSNFRNHGSGRNSL 725
Query: 1055 GIISESPPSNSVGFFFGSTP 1114
GIISESPPSNSVGFFFGSTP
Sbjct: 726 GIISESPPSNSVGFFFGSTP 745
>ref|XP_002519615.1| lupus la ribonucleoprotein, putative [Ricinus communis]
gi|223541205|gb|EEF42760.1| lupus la ribonucleoprotein,
putative [Ricinus communis]
Length = 867
Score = 211 bits (536), Expect = 3e-52
Identities = 142/376 (37%), Positives = 204/376 (54%), Gaps = 5/376 (1%)
Frame = +2
Query: 2 SSAVEVQDEKVRRRGEWSKWVPASVDKKSSLVEIKTLGQPANKVISDLKSNDVSEDKAIE 181
SS +EVQ +K+RRR EWSKW+ AS++ + QP +N+ + E
Sbjct: 348 SSTIEVQGDKIRRRDEWSKWIAASIEHTLPSQTQTSESQPVEP------ANEGNARATPE 401
Query: 182 TSGESDDLFWRQDSLVALSTSDRDAKKLVESDA-EHNGGKVLFDTQTQPMGEGNPESNMG 358
+G S LV + + DA +++ + E + VL + Q M + N +++
Sbjct: 402 ENGSSSI----NAGLVKNNLPNGDASEIINTGKMEGSSASVLLNAGKQAMSDVNRDTSGE 457
Query: 359 SNSELHIKIPHHGIIDGSDGVYSKCKTAKFVDHEIHDSERMTVPADFSAEIQDSPCNDFS 538
++L+ K+ G G+ + K + + ++ +D ++ NDF+
Sbjct: 458 CVTDLNSKLSDLGSSYGAPYL-GHAKEFEPAVSNYNGTDCFEFSSDMTSINVGELANDFA 516
Query: 539 STFMFDEEMEHELKATKENKFSSLKSSQMIDDDEEMTVNDHAVERLVIVTQNSRIGEEPR 718
+TFM DEE+E E K K + SS++ ++ D+++EM VND V+RLVIVTQNSR GE +
Sbjct: 517 NTFMLDEELELEHKIQKNDSVSSIR--RIDDEEDEMLVNDPDVQRLVIVTQNSRAGEGIK 574
Query: 719 TSVNXXXXXXXXXXXXXNDGLYFYEQELKAQRSNCRRNTLSNETRHGKSRSYVSSAAG-- 892
T NDGLYFYEQELK +R N R+++ E R G R + +SA G
Sbjct: 575 TGSKESKSISKEQAFAINDGLYFYEQELKTKRCNRRKSSSGVENRDGNLR-FTNSALGMS 633
Query: 893 -SIAVENSAGGCGCEVPGNANSRKKLNKGFSKQQPIHKQRLFSSTFRNHGTGR-THGIIS 1066
S E+S G G E G++N+ ++ NK FSK Q HKQR FS FRNHGTGR + GIIS
Sbjct: 634 NSKVGESSIGSGGQEESGSSNNLRRQNKSFSKPQSSHKQRFFSCNFRNHGTGRNSFGIIS 693
Query: 1067 ESPPSNSVGFFFGSTP 1114
ESPPSNSVGFFF STP
Sbjct: 694 ESPPSNSVGFFFSSTP 709
>ref|XP_004149652.1| PREDICTED: la-related protein 1-like [Cucumis sativus]
Length = 881
Score = 207 bits (526), Expect = 5e-51
Identities = 141/376 (37%), Positives = 190/376 (50%), Gaps = 5/376 (1%)
Frame = +2
Query: 2 SSAVEVQDEKVRRRGEWSKWVPASVDKKSSLVEIKTLGQPANKVISDLKSNDVSEDKAIE 181
S+ VEVQ +KVR+R EWSKWVP S D KS+L ++T P ++ + L + S+ +
Sbjct: 358 SANVEVQGDKVRKRDEWSKWVPVSADSKSTL-NVETSSIPVDESTNSLVDENASDGSRVL 416
Query: 182 TSGESDDLFWRQDSLVALSTSDRDAKKLVESDA--EHNGGKVLFDTQTQPMGEGNPESNM 355
S ++ Q S RD+ ++ D EH+ G V
Sbjct: 417 ASNDNIKSSLLQ-GCSREQFSSRDSPEVANLDIVEEHSSGTV------------------ 457
Query: 356 GSNSELHIKIPHHGIIDGSDGVYSKCKTAKFVDHEIHDSERMTVPADFSAEIQDSPCNDF 535
P GI + ++ A D + F
Sbjct: 458 ----------PPQGI---------------------------KISSNVGAHDVDDLSSQF 480
Query: 536 SSTFMFDEEMEHELKATKENKFSSLKSSQMIDDDEEMTVNDHAVERLVIVTQNSRIGEEP 715
SSTFM DEE+E E KA K++ +S + ++ +DD+E+ VND V+RL+IVTQN I +
Sbjct: 481 SSTFMLDEELEIEQKAIKKDDLTS--NGRIDEDDDEIAVNDQDVQRLIIVTQNRAIEKRS 538
Query: 716 RTSVNXXXXXXXXXXXXXNDGLYFYEQELKAQRSNCRRNTLSNETRHGKSR--SYVSSAA 889
+ NDGLYFYEQ L+ +RSN +++ ++E R G SR S + +A
Sbjct: 539 TSGGKESKSISKELASTINDGLYFYEQVLEKKRSNRKKSKCNSENREGTSRLSSSATGSA 598
Query: 890 GSIAVENSAGGCGCEVPGNANSRKKLNKGFSKQQPIHKQRLFSSTFRNHGTGRTH-GIIS 1066
S ENSAG CG + GNA+ RKK K F KQQ HKQR FSS FRNHGT R GI++
Sbjct: 599 RSKPSENSAGYCGLDEIGNASPRKKQTKTFPKQQSSHKQRFFSSNFRNHGTSRNSLGIVA 658
Query: 1067 ESPPSNSVGFFFGSTP 1114
ESPPSNSVGFFFGSTP
Sbjct: 659 ESPPSNSVGFFFGSTP 674
>emb|CBI24386.3| unnamed protein product [Vitis vinifera]
Length = 841
Score = 202 bits (514), Expect = 1e-49
Identities = 114/200 (57%), Positives = 130/200 (65%), Gaps = 4/200 (2%)
Frame = +2
Query: 527 NDFSSTFMFDEEMEHELKATKENKFSSLKSSQMIDDDEEMTVNDHAVERLVIVTQNSRIG 706
NDF+S FM DEE+E E K +K+ SS + ++ D+DEEM VND V RLVIVTQNSR G
Sbjct: 436 NDFASPFMLDEELEPEPKTSKKVDLSSTR--RIDDEDEEMVVNDQDVHRLVIVTQNSRTG 493
Query: 707 EEPRTSVNXXXXXXXXXXXXXNDGLYFYEQELKAQRSNCRRNTLSNETRHGKSRS--YVS 880
E NDGL+FYEQELK + SNCR+N+ S E R G SRS V
Sbjct: 494 EGSGNGAQESKSISNELASAINDGLFFYEQELKTKGSNCRKNSFSFENRDGISRSSSIVP 553
Query: 881 SAAGSIAVENSAGGCGCEVPGNANSRKKLNKGFSKQQ-PIHKQRLFSSTFRNHGTGRTH- 1054
+ ENS G GCE PGN NSR+K NKGF KQQ HKQR F+S FRNHG+GR
Sbjct: 554 GLVNAKTGENSIGSSGCEEPGNCNSRRKQNKGFPKQQASSHKQRFFTSNFRNHGSGRNSL 613
Query: 1055 GIISESPPSNSVGFFFGSTP 1114
GIISESPPSNSVGFFFGSTP
Sbjct: 614 GIISESPPSNSVGFFFGSTP 633
>ref|XP_004165480.1| PREDICTED: LOW QUALITY PROTEIN: la-related protein 1-like [Cucumis
sativus]
Length = 881
Score = 202 bits (513), Expect = 2e-49
Identities = 139/376 (36%), Positives = 188/376 (50%), Gaps = 5/376 (1%)
Frame = +2
Query: 2 SSAVEVQDEKVRRRGEWSKWVPASVDKKSSLVEIKTLGQPANKVISDLKSNDVSEDKAIE 181
S+ VEVQ +KVR+R EWSKWVP S D KS+L ++T P ++ + L + S+ +
Sbjct: 358 SANVEVQGDKVRKRDEWSKWVPVSADSKSTL-NVETSSIPVDESTNSLVDENASDGSRVL 416
Query: 182 TSGESDDLFWRQDSLVALSTSDRDAKKLVESDA--EHNGGKVLFDTQTQPMGEGNPESNM 355
S ++ Q S RD+ ++ D EH+ G V
Sbjct: 417 ASNDNIKSSLLQ-GCSREQFSSRDSPEVANLDIVEEHSSGTV------------------ 457
Query: 356 GSNSELHIKIPHHGIIDGSDGVYSKCKTAKFVDHEIHDSERMTVPADFSAEIQDSPCNDF 535
P GI + ++ A D + F
Sbjct: 458 ----------PPQGI---------------------------KISSNVGAHDVDDLSSQF 480
Query: 536 SSTFMFDEEMEHELKATKENKFSSLKSSQMIDDDEEMTVNDHAVERLVIVTQNSRIGEEP 715
SSTFM DEE+E E KA K++ +S + ++ +DD+E+ VND V+RL+IVTQN I +
Sbjct: 481 SSTFMLDEELEIEQKAIKKDDLTS--NGRIDEDDDEIAVNDQDVQRLIIVTQNRAIEKRS 538
Query: 716 RTSVNXXXXXXXXXXXXXNDGLYFYEQELKAQRSNCRRNTLSNETRHGKSR--SYVSSAA 889
+ NDGLYFYEQ + +RSN +++ ++E R G SR S + +A
Sbjct: 539 TSGGKESKSISKELASTINDGLYFYEQVERKKRSNRKKSKCNSENREGTSRLSSSATGSA 598
Query: 890 GSIAVENSAGGCGCEVPGNANSRKKLNKGFSKQQPIHKQRLFSSTFRNHGTGRTH-GIIS 1066
S ENSAG CG + GNA+ RKK K F KQQ HKQR FSS FRNHGT R GI++
Sbjct: 599 RSKPSENSAGYCGLDEIGNASPRKKQTKTFPKQQSSHKQRFFSSNFRNHGTSRNSLGIVA 658
Query: 1067 ESPPSNSVGFFFGSTP 1114
ESPPSNSV FFFGSTP
Sbjct: 659 ESPPSNSVXFFFGSTP 674