BLASTX nr result

ID: Panax21_contig00024171 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00024171
         (471 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002304403.1| predicted protein [Populus trichocarpa] gi|2...    62   5e-08
ref|XP_002326789.1| predicted protein [Populus trichocarpa] gi|2...    61   1e-07
ref|XP_002510978.1| conserved hypothetical protein [Ricinus comm...    60   2e-07

>ref|XP_002304403.1| predicted protein [Populus trichocarpa] gi|222841835|gb|EEE79382.1|
           predicted protein [Populus trichocarpa]
          Length = 343

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 31/78 (39%), Positives = 45/78 (57%)
 Frame = -1

Query: 465 DDSKAAMDVLSWIFINTKAKIMDLIDKITKMVDELFLPPKSEKKIGKAADSFEEKLRTXX 286
           ++S  A++ + WIF NT+A+ M++ + ITK+V+E F PP  EK      D FE+KLR+  
Sbjct: 266 EESNPALNFVKWIFDNTRARAMEIFETITKLVNEFFKPPAGEKTSAGTKDPFEDKLRSSF 325

Query: 285 XXXXXXXXXXXVTRASKA 232
                      VTRA KA
Sbjct: 326 LLSIMVLLIVVVTRAQKA 343


>ref|XP_002326789.1| predicted protein [Populus trichocarpa] gi|222834111|gb|EEE72588.1|
           predicted protein [Populus trichocarpa]
          Length = 344

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 29/78 (37%), Positives = 47/78 (60%)
 Frame = -1

Query: 465 DDSKAAMDVLSWIFINTKAKIMDLIDKITKMVDELFLPPKSEKKIGKAADSFEEKLRTXX 286
           +++  A++ + WIF NT+A+++++I+ +TK+V+ELF PP  EK      D FE+KLR+  
Sbjct: 267 EETNPALNFVKWIFDNTRARVVEVIETVTKLVNELFKPPADEKTSAGDKDPFEDKLRSSF 326

Query: 285 XXXXXXXXXXXVTRASKA 232
                      VTR  KA
Sbjct: 327 LLSIMVLLIVVVTRVQKA 344


>ref|XP_002510978.1| conserved hypothetical protein [Ricinus communis]
           gi|223550093|gb|EEF51580.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 342

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 33/79 (41%), Positives = 43/79 (54%)
 Frame = -1

Query: 468 SDDSKAAMDVLSWIFINTKAKIMDLIDKITKMVDELFLPPKSEKKIGKAADSFEEKLRTX 289
           S DS  A + + WIF NTKAK M+++DKIT +++ LF  P  E       D FEE+LRT 
Sbjct: 264 SHDSNPATNAVKWIFQNTKAKFMEVLDKITMLMNVLFKAPDVENNATGTVDPFEERLRTS 323

Query: 288 XXXXXXXXXXXXVTRASKA 232
                       VTRA +A
Sbjct: 324 FLLSVVVLLVVVVTRAHRA 342


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