BLASTX nr result

ID: Panax21_contig00024155 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00024155
         (1088 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277013.1| PREDICTED: peptidyl-tRNA hydrolase 2, mitoch...   278   2e-72
ref|XP_004148093.1| PREDICTED: peptidyl-tRNA hydrolase 2, mitoch...   269   8e-70
ref|XP_002328981.1| predicted protein [Populus trichocarpa] gi|2...   264   3e-68
gb|AEL99151.1| peptidyl-tRNA hydrolase II (PTH2) family protein,...   261   2e-67
ref|XP_002277299.1| PREDICTED: peptidyl-tRNA hydrolase 2, mitoch...   261   3e-67

>ref|XP_002277013.1| PREDICTED: peptidyl-tRNA hydrolase 2, mitochondrial isoform 1
           [Vitis vinifera] gi|297737314|emb|CBI26515.3| unnamed
           protein product [Vitis vinifera]
          Length = 181

 Score =  278 bits (711), Expect = 2e-72
 Identities = 139/180 (77%), Positives = 155/180 (86%)
 Frame = -1

Query: 797 IDMTWLSAILVGAGCLALGYIIGVRHPGHVLFMARTTKDTAVVVDGNKTTRAKQPLEVEK 618
           +D+TWLSAILVGAGCLALGY+IG RHP   L  A   KDTAVV D NK  + ++  E+EK
Sbjct: 1   MDLTWLSAILVGAGCLALGYLIGTRHPARFLVSATLAKDTAVVGDANKKNQFQKLDEIEK 60

Query: 617 LAEILEDFKMVLVVRNDLKMGKGKTAAQCSHATLGLYKKILYRAPKALSRWEMCGQVKVV 438
           LA+ILEDFKMVLVVRNDLKMGKGK AAQCSHATLGLYKK+L RAPKAL+RWE CGQVKVV
Sbjct: 61  LADILEDFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLLRRAPKALNRWENCGQVKVV 120

Query: 437 VKIESEDDMLVLQERAKSLNIPTHIVIDAGRTQIAPNSRTVMAVFGPAELVDDVTGGLKL 258
           +K ESE+DMLVLQ RAKSL +P HI IDAGRTQIAPNSRTVMA+ GPA++VDDVTGGLKL
Sbjct: 121 LKTESEEDMLVLQGRAKSLQLPNHITIDAGRTQIAPNSRTVMAILGPADMVDDVTGGLKL 180


>ref|XP_004148093.1| PREDICTED: peptidyl-tRNA hydrolase 2, mitochondrial-like [Cucumis
           sativus] gi|449522171|ref|XP_004168101.1| PREDICTED:
           peptidyl-tRNA hydrolase 2, mitochondrial-like [Cucumis
           sativus]
          Length = 181

 Score =  269 bits (688), Expect = 8e-70
 Identities = 133/181 (73%), Positives = 151/181 (83%)
 Frame = -1

Query: 797 IDMTWLSAILVGAGCLALGYIIGVRHPGHVLFMARTTKDTAVVVDGNKTTRAKQPLEVEK 618
           +D+ WLSAI+VGAGCL LGY IG ++P  V   A+  K      +G K  + K+PLEVE 
Sbjct: 1   MDLAWLSAIVVGAGCLVLGYYIGSKYPPRVFVKAKLAKSNESSRNGKKKDKTKEPLEVEN 60

Query: 617 LAEILEDFKMVLVVRNDLKMGKGKTAAQCSHATLGLYKKILYRAPKALSRWEMCGQVKVV 438
           LA+IL+DFKMVLVVRNDLKMGKGK AAQCSHATLGLYKK+ YRAPKAL+RWEMC Q KVV
Sbjct: 61  LADILDDFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLHYRAPKALNRWEMCAQPKVV 120

Query: 437 VKIESEDDMLVLQERAKSLNIPTHIVIDAGRTQIAPNSRTVMAVFGPAELVDDVTGGLKL 258
           +KIESE+DMLVLQERAKSL +PTHI IDAGRTQIAPNSRTVMA+ GP E+VDDVTGGLKL
Sbjct: 121 LKIESEEDMLVLQERAKSLKLPTHITIDAGRTQIAPNSRTVMAILGPVEVVDDVTGGLKL 180

Query: 257 L 255
           L
Sbjct: 181 L 181


>ref|XP_002328981.1| predicted protein [Populus trichocarpa] gi|222839215|gb|EEE77566.1|
           predicted protein [Populus trichocarpa]
          Length = 186

 Score =  264 bits (675), Expect = 3e-68
 Identities = 134/186 (72%), Positives = 151/186 (81%), Gaps = 5/186 (2%)
 Frame = -1

Query: 797 IDMTWLSAILVGAGCLALGYIIGVRHPGHVLF-----MARTTKDTAVVVDGNKTTRAKQP 633
           +D++WLSAILVGAGCLALGY IG R P          + R T        GNK   +K+P
Sbjct: 1   MDLSWLSAILVGAGCLALGYCIGTRRPFCFFLRLTPKVVRDTNTNPSSHHGNKNNNSKEP 60

Query: 632 LEVEKLAEILEDFKMVLVVRNDLKMGKGKTAAQCSHATLGLYKKILYRAPKALSRWEMCG 453
            E +KLA+IL+DFKMVLVVRNDLKMGKGK AAQCSHATLGLYKK+L+RAPKAL+RWEMC 
Sbjct: 61  FETDKLADILDDFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLLHRAPKALNRWEMCA 120

Query: 452 QVKVVVKIESEDDMLVLQERAKSLNIPTHIVIDAGRTQIAPNSRTVMAVFGPAELVDDVT 273
           Q KVVVKIESE+DMLVLQ+RAKSLN+PTHI IDAGRTQIAPNSRTVMA+ GP  +VDDVT
Sbjct: 121 QPKVVVKIESEEDMLVLQDRAKSLNLPTHITIDAGRTQIAPNSRTVMAILGPVGVVDDVT 180

Query: 272 GGLKLL 255
           GGLKLL
Sbjct: 181 GGLKLL 186


>gb|AEL99151.1| peptidyl-tRNA hydrolase II (PTH2) family protein, partial [Silene
           latifolia]
          Length = 176

 Score =  261 bits (668), Expect = 2e-67
 Identities = 129/181 (71%), Positives = 151/181 (83%)
 Frame = -1

Query: 797 IDMTWLSAILVGAGCLALGYIIGVRHPGHVLFMARTTKDTAVVVDGNKTTRAKQPLEVEK 618
           +D+TWL+A+LVGAGCL LGY++G R     L   + +  +      +K  RA++PLE+EK
Sbjct: 1   LDLTWLTALLVGAGCLGLGYLVGARRQARFLVSTQASNKSV-----SKKNRAQEPLEIEK 55

Query: 617 LAEILEDFKMVLVVRNDLKMGKGKTAAQCSHATLGLYKKILYRAPKALSRWEMCGQVKVV 438
           LA+I+EDFKMVLVVRNDLKMGKGK AAQCSHATLGL+KK+  RAPKALSRWEMCGQVKVV
Sbjct: 56  LADIIEDFKMVLVVRNDLKMGKGKIAAQCSHATLGLFKKLQNRAPKALSRWEMCGQVKVV 115

Query: 437 VKIESEDDMLVLQERAKSLNIPTHIVIDAGRTQIAPNSRTVMAVFGPAELVDDVTGGLKL 258
           VK ESE+DML LQ RAKS ++PTHI IDAGRTQIAPNSRTVMA+ GPAE+VDDVTGGLKL
Sbjct: 116 VKTESEEDMLALQGRAKSTHLPTHITIDAGRTQIAPNSRTVMAILGPAEMVDDVTGGLKL 175

Query: 257 L 255
           L
Sbjct: 176 L 176


>ref|XP_002277299.1| PREDICTED: peptidyl-tRNA hydrolase 2, mitochondrial isoform 2
           [Vitis vinifera]
          Length = 173

 Score =  261 bits (666), Expect = 3e-67
 Identities = 131/170 (77%), Positives = 145/170 (85%)
 Frame = -1

Query: 767 VGAGCLALGYIIGVRHPGHVLFMARTTKDTAVVVDGNKTTRAKQPLEVEKLAEILEDFKM 588
           VGAGCLALGY+IG RHP   L  A   KDTAVV D NK  + ++  E+EKLA+ILEDFKM
Sbjct: 3   VGAGCLALGYLIGTRHPARFLVSATLAKDTAVVGDANKKNQFQKLDEIEKLADILEDFKM 62

Query: 587 VLVVRNDLKMGKGKTAAQCSHATLGLYKKILYRAPKALSRWEMCGQVKVVVKIESEDDML 408
           VLVVRNDLKMGKGK AAQCSHATLGLYKK+L RAPKAL+RWE CGQVKVV+K ESE+DML
Sbjct: 63  VLVVRNDLKMGKGKIAAQCSHATLGLYKKLLRRAPKALNRWENCGQVKVVLKTESEEDML 122

Query: 407 VLQERAKSLNIPTHIVIDAGRTQIAPNSRTVMAVFGPAELVDDVTGGLKL 258
           VLQ RAKSL +P HI IDAGRTQIAPNSRTVMA+ GPA++VDDVTGGLKL
Sbjct: 123 VLQGRAKSLQLPNHITIDAGRTQIAPNSRTVMAILGPADMVDDVTGGLKL 172


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