BLASTX nr result
ID: Panax21_contig00024145
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax21_contig00024145
(787 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002319808.1| predicted protein [Populus trichocarpa] gi|2... 132 7e-29
ref|XP_003615596.1| Zinc finger MYM-type protein [Medicago trunc... 118 1e-24
ref|XP_003603421.1| Zinc finger MYM-type protein [Medicago trunc... 111 2e-22
gb|AAT39314.2| Transposase, putative [Solanum demissum] 110 3e-22
gb|AAT38794.1| Putative hAT family dimerisation domain containin... 108 1e-21
>ref|XP_002319808.1| predicted protein [Populus trichocarpa] gi|222858184|gb|EEE95731.1|
predicted protein [Populus trichocarpa]
Length = 788
Score = 132 bits (333), Expect = 7e-29
Identities = 63/111 (56%), Positives = 84/111 (75%)
Frame = +2
Query: 455 SSRKSQGITNFHHYYVEIFCTVLDWQLQELNDRFTEASTDLFLSVACLNPSDCFASFDKD 634
S RKSQGITN HH+ E+F ++D QL EL+DRFTE ST+L L VACLNPSD F++F+K+
Sbjct: 591 SRRKSQGITNLHHFRYELFNNIIDMQLTELDDRFTETSTELLLCVACLNPSDSFSAFNKE 650
Query: 635 KLIHLASIYSNDFSPMDLMKLDSQLDNYISDMRTNQEFLEVQGISCLARKL 787
KL+ LA Y ++FS +DLM L QLD YI D+R + EF +++GI+ LA K+
Sbjct: 651 KLLRLALFYPSEFSIVDLMILGDQLDTYIIDLRGDDEFSDIEGIASLAEKM 701
Score = 108 bits (271), Expect = 1e-21
Identities = 55/102 (53%), Positives = 72/102 (70%)
Frame = +1
Query: 1 FSSVIDVLEEVSDDGLVYQQKGIAFGLLESLQSFGFAFDLILMRKILGITNELSQALQRK 180
FSSV+DVLE + +DG+ +Q+ A L + ++SF F F L +R+IL +TNE SQALQRK
Sbjct: 475 FSSVLDVLEIIREDGMNSEQRTEAVILTDIMESFNFVFMLHCLRRILAVTNEFSQALQRK 534
Query: 181 DQDIVNAMELVKVSKQLLKVMRDEGWEKLLDEVCLFCNKHKI 306
DQDI NAM L+ SK+ K+MR+ WE LL+EV FC KH I
Sbjct: 535 DQDIENAMSLLNTSKERFKMMRENDWESLLEEVSSFCIKHDI 576
>ref|XP_003615596.1| Zinc finger MYM-type protein [Medicago truncatula]
gi|355516931|gb|AES98554.1| Zinc finger MYM-type protein
[Medicago truncatula]
Length = 892
Score = 118 bits (296), Expect = 1e-24
Identities = 59/102 (57%), Positives = 76/102 (74%)
Frame = +1
Query: 1 FSSVIDVLEEVSDDGLVYQQKGIAFGLLESLQSFGFAFDLILMRKILGITNELSQALQRK 180
+SS+ DVLE + DD + +G A GLL + +F FA L LM+K+L +NELSQALQRK
Sbjct: 578 YSSITDVLEMLRDDVSIKDGRGEAKGLLILMNTFDFALTLHLMKKVLDFSNELSQALQRK 637
Query: 181 DQDIVNAMELVKVSKQLLKVMRDEGWEKLLDEVCLFCNKHKI 306
DQDIVNAM LV ++K+ L+ +RD+GWE LL+EV LFCNKH I
Sbjct: 638 DQDIVNAMNLVSITKERLQALRDDGWEPLLEEVILFCNKHDI 679
Score = 107 bits (266), Expect = 4e-21
Identities = 52/107 (48%), Positives = 75/107 (70%)
Frame = +2
Query: 467 SQGITNFHHYYVEIFCTVLDWQLQELNDRFTEASTDLFLSVACLNPSDCFASFDKDKLIH 646
++ IT +HY +E+F TV+D QLQELN+RF E ++ L + + CL P++ F+ FDK KLI
Sbjct: 699 AESITIGNHYRIELFYTVVDMQLQELNNRFNETNSRLLICMECLCPNNSFSKFDKAKLIE 758
Query: 647 LASIYSNDFSPMDLMKLDSQLDNYISDMRTNQEFLEVQGISCLARKL 787
A Y +FSP L+ LDSQL+ YI DMR + EF ++GIS L++K+
Sbjct: 759 FAKFYPIEFSPTSLVLLDSQLETYIFDMRRSVEFASLKGISDLSKKM 805
>ref|XP_003603421.1| Zinc finger MYM-type protein [Medicago truncatula]
gi|355492469|gb|AES73672.1| Zinc finger MYM-type protein
[Medicago truncatula]
Length = 527
Score = 111 bits (277), Expect = 2e-22
Identities = 54/111 (48%), Positives = 78/111 (70%)
Frame = +2
Query: 455 SSRKSQGITNFHHYYVEIFCTVLDWQLQELNDRFTEASTDLFLSVACLNPSDCFASFDKD 634
S R S+ ++N H++ V+ F V+D QLQELN+R +E +T+L L VACLN D F++FDK
Sbjct: 368 SKRNSEKVSNLHYFQVQFFYQVIDRQLQELNNRSSEVNTELLLCVACLNLRDSFSAFDKK 427
Query: 635 KLIHLASIYSNDFSPMDLMKLDSQLDNYISDMRTNQEFLEVQGISCLARKL 787
LI LA +DFSP+ L++LDSQL+NYI D+ + F E++GI L+ K+
Sbjct: 428 NLIRLAEFSPSDFSPVQLLELDSQLENYIVDVCSEDAFYELEGIGDLSIKM 478
>gb|AAT39314.2| Transposase, putative [Solanum demissum]
Length = 812
Score = 110 bits (275), Expect = 3e-22
Identities = 51/112 (45%), Positives = 76/112 (67%), Gaps = 1/112 (0%)
Frame = +2
Query: 455 SSRKSQGITNFHHYYVEIFCTVLDWQLQELNDRFTEASTDLFLSVACLNPSDCFASFDKD 634
S RK T HHY VE+FC ++DWQLQELNDRF E +TDL +ACLNP F+SFD
Sbjct: 614 SRRKLANYTILHHYRVEVFCNIIDWQLQELNDRFDEVTTDLLHGIACLNPIKSFSSFDIR 673
Query: 635 KLIHLASIYSNDFSPMDLMKLDSQLDNYISDMR-TNQEFLEVQGISCLARKL 787
K++ +A +Y +DF ++ L++QL +YI D+R ++ F ++ G+ L+++L
Sbjct: 674 KIMRMAELYPDDFDESNMNILENQLASYIVDVRDVDERFFDLNGLCDLSKRL 725
Score = 98.6 bits (244), Expect = 1e-18
Identities = 49/102 (48%), Positives = 72/102 (70%)
Frame = +1
Query: 1 FSSVIDVLEEVSDDGLVYQQKGIAFGLLESLQSFGFAFDLILMRKILGITNELSQALQRK 180
F S+++VLE ++ D ++ A G LE+ Q+F AF L LMR +L ITNEL++ LQ+K
Sbjct: 498 FGSILEVLESLALDARSMDERAKAMGHLEACQTFEIAFMLHLMRDVLAITNELNKCLQKK 557
Query: 181 DQDIVNAMELVKVSKQLLKVMRDEGWEKLLDEVCLFCNKHKI 306
+QDI NAM LV+V+K+ L+V+RD+ W+ L+ +V FC KH I
Sbjct: 558 EQDIANAMLLVEVAKRRLQVLRDDEWDSLIAKVSTFCIKHNI 599
>gb|AAT38794.1| Putative hAT family dimerisation domain containing protein,
identical [Solanum demissum]
Length = 805
Score = 108 bits (271), Expect = 1e-21
Identities = 51/112 (45%), Positives = 75/112 (66%), Gaps = 1/112 (0%)
Frame = +2
Query: 455 SSRKSQGITNFHHYYVEIFCTVLDWQLQELNDRFTEASTDLFLSVACLNPSDCFASFDKD 634
S RK T HHY VE+FC ++DWQLQELNDRF E +TDL +ACLNP F+SFD
Sbjct: 607 SRRKLANYTILHHYRVEVFCNIIDWQLQELNDRFDEVTTDLLHGIACLNPIKSFSSFDIR 666
Query: 635 KLIHLASIYSNDFSPMDLMKLDSQLDNYISDMR-TNQEFLEVQGISCLARKL 787
K + +A +Y +DF ++ L++QL +YI D+R ++ F ++ G+ L+++L
Sbjct: 667 KKMRMAELYPDDFDESNMNILENQLASYIVDVRDVDERFFDLNGLCDLSKRL 718
Score = 98.6 bits (244), Expect = 1e-18
Identities = 49/102 (48%), Positives = 72/102 (70%)
Frame = +1
Query: 1 FSSVIDVLEEVSDDGLVYQQKGIAFGLLESLQSFGFAFDLILMRKILGITNELSQALQRK 180
F S+++VLE ++ D ++ A G LE+ Q+F AF L LMR +L ITNEL++ LQ+K
Sbjct: 491 FGSILEVLESLALDARSMDERAKAMGHLEACQTFEIAFMLHLMRDVLAITNELNKCLQKK 550
Query: 181 DQDIVNAMELVKVSKQLLKVMRDEGWEKLLDEVCLFCNKHKI 306
+QDI NAM LV+V+K+ L+V+RD+ W+ L+ +V FC KH I
Sbjct: 551 EQDIANAMLLVEVAKRRLQVLRDDEWDSLIAKVSTFCIKHNI 592