BLASTX nr result

ID: Panax21_contig00024134 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00024134
         (373 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310611.1| predicted protein [Populus trichocarpa] gi|2...   192   2e-47
ref|XP_003525087.1| PREDICTED: UPF0202 protein At1g10490-like [G...   191   4e-47
ref|XP_002279361.1| PREDICTED: UPF0202 protein At1g10490 [Vitis ...   191   4e-47
ref|XP_002307135.1| predicted protein [Populus trichocarpa] gi|2...   190   9e-47
ref|XP_004164945.1| PREDICTED: LOW QUALITY PROTEIN: UPF0202 prot...   187   8e-46

>ref|XP_002310611.1| predicted protein [Populus trichocarpa] gi|222853514|gb|EEE91061.1|
           predicted protein [Populus trichocarpa]
          Length = 1033

 Score =  192 bits (489), Expect = 2e-47
 Identities = 98/124 (79%), Positives = 104/124 (83%)
 Frame = +1

Query: 1   RVLGNTFGMCILQDFEALTPNLLARTIETVEXXXXXXXXXXXXXXXXXXYTMVMDVHERY 180
           R+LGNTFGMCILQDFEALTPNLLARTIETVE                  YTMVMDVHER+
Sbjct: 110 RILGNTFGMCILQDFEALTPNLLARTIETVEGGGLIVLLLRSLSSLTSLYTMVMDVHERF 169

Query: 181 RTISHSEATGRFNERFLLSLASCKACVVMDDELNILPISSHVKSITPVPVKEDSEGLSEA 360
           RT SHSEATGRFNERFLLSLASCKACVVMDDELNILPISSH++SITP PVKEDSEGLSEA
Sbjct: 170 RTESHSEATGRFNERFLLSLASCKACVVMDDELNILPISSHIRSITPNPVKEDSEGLSEA 229

Query: 361 EQDL 372
           E++L
Sbjct: 230 ERNL 233


>ref|XP_003525087.1| PREDICTED: UPF0202 protein At1g10490-like [Glycine max]
          Length = 1029

 Score =  191 bits (486), Expect = 4e-47
 Identities = 97/124 (78%), Positives = 103/124 (83%)
 Frame = +1

Query: 1   RVLGNTFGMCILQDFEALTPNLLARTIETVEXXXXXXXXXXXXXXXXXXYTMVMDVHERY 180
           RVLGNTFGMC+LQDFEALTPNLLARTIETVE                  YTMVMDVH+R+
Sbjct: 111 RVLGNTFGMCVLQDFEALTPNLLARTIETVEGGGLVVLLLRSLSSLTRLYTMVMDVHDRF 170

Query: 181 RTISHSEATGRFNERFLLSLASCKACVVMDDELNILPISSHVKSITPVPVKEDSEGLSEA 360
           RT SHSEA GRFNERFLLSLASCKACVVMDDELNILPISSH++SITPVPVKEDS+ LSEA
Sbjct: 171 RTESHSEAAGRFNERFLLSLASCKACVVMDDELNILPISSHIRSITPVPVKEDSDELSEA 230

Query: 361 EQDL 372
           EQDL
Sbjct: 231 EQDL 234


>ref|XP_002279361.1| PREDICTED: UPF0202 protein At1g10490 [Vitis vinifera]
           gi|296082521|emb|CBI21526.3| unnamed protein product
           [Vitis vinifera]
          Length = 1032

 Score =  191 bits (486), Expect = 4e-47
 Identities = 96/124 (77%), Positives = 103/124 (83%)
 Frame = +1

Query: 1   RVLGNTFGMCILQDFEALTPNLLARTIETVEXXXXXXXXXXXXXXXXXXYTMVMDVHERY 180
           R+LGNTFGMC+LQDFEALTPNLLARTIETVE                  YTMVMDVHER+
Sbjct: 111 RILGNTFGMCVLQDFEALTPNLLARTIETVEGGGLIVLLLRSLSSLTSLYTMVMDVHERF 170

Query: 181 RTISHSEATGRFNERFLLSLASCKACVVMDDELNILPISSHVKSITPVPVKEDSEGLSEA 360
           RT SHSEA GRFNERFLLSLASCKACV+MDDELNILPISSH++SIT VPVKEDSEGLSEA
Sbjct: 171 RTESHSEAAGRFNERFLLSLASCKACVIMDDELNILPISSHIRSITAVPVKEDSEGLSEA 230

Query: 361 EQDL 372
           E+DL
Sbjct: 231 ERDL 234


>ref|XP_002307135.1| predicted protein [Populus trichocarpa] gi|222856584|gb|EEE94131.1|
           predicted protein [Populus trichocarpa]
          Length = 962

 Score =  190 bits (483), Expect = 9e-47
 Identities = 97/124 (78%), Positives = 102/124 (82%)
 Frame = +1

Query: 1   RVLGNTFGMCILQDFEALTPNLLARTIETVEXXXXXXXXXXXXXXXXXXYTMVMDVHERY 180
           R+LGNTFGMCILQDFEALTPNLLARTIETVE                  YTMVMDVHER+
Sbjct: 116 RILGNTFGMCILQDFEALTPNLLARTIETVEGGGLIVLLLRSLSSLTSLYTMVMDVHERF 175

Query: 181 RTISHSEATGRFNERFLLSLASCKACVVMDDELNILPISSHVKSITPVPVKEDSEGLSEA 360
           RT SH  ATGRFNERFLLSLASCKACVVMDDELNILPISSH++SITPVPVKEDSEGLSEA
Sbjct: 176 RTESHFRATGRFNERFLLSLASCKACVVMDDELNILPISSHIRSITPVPVKEDSEGLSEA 235

Query: 361 EQDL 372
           E+ L
Sbjct: 236 ERGL 239


>ref|XP_004164945.1| PREDICTED: LOW QUALITY PROTEIN: UPF0202 protein At1g10490-like
           [Cucumis sativus]
          Length = 1030

 Score =  187 bits (475), Expect = 8e-46
 Identities = 93/124 (75%), Positives = 100/124 (80%)
 Frame = +1

Query: 1   RVLGNTFGMCILQDFEALTPNLLARTIETVEXXXXXXXXXXXXXXXXXXYTMVMDVHERY 180
           R+LGNTFGMCILQDFEALTPNLLARTIETVE                  YTMVMDVHERY
Sbjct: 111 RILGNTFGMCILQDFEALTPNLLARTIETVEGGGLIILLLRSLSSLTSLYTMVMDVHERY 170

Query: 181 RTISHSEATGRFNERFLLSLASCKACVVMDDELNILPISSHVKSITPVPVKEDSEGLSEA 360
           RT SH EA GRFNERFLLSLASCKACV+MDDE+N+LPISSH++SITP+PVKEDSEGL E 
Sbjct: 171 RTESHLEAAGRFNERFLLSLASCKACVLMDDEMNVLPISSHIRSITPIPVKEDSEGLPEG 230

Query: 361 EQDL 372
           E DL
Sbjct: 231 EWDL 234


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