BLASTX nr result

ID: Panax21_contig00024132 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00024132
         (483 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI35443.3| unnamed protein product [Vitis vinifera]              188   4e-46
ref|XP_002263595.1| PREDICTED: DNA polymerase V-like [Vitis vini...   188   4e-46
emb|CAN80013.1| hypothetical protein VITISV_030078 [Vitis vinifera]   188   4e-46
ref|XP_002313953.1| predicted protein [Populus trichocarpa] gi|2...   187   6e-46
ref|XP_002300310.1| predicted protein [Populus trichocarpa] gi|2...   177   1e-42

>emb|CBI35443.3| unnamed protein product [Vitis vinifera]
          Length = 1237

 Score =  188 bits (477), Expect = 4e-46
 Identities = 104/160 (65%), Positives = 113/160 (70%)
 Frame = +3

Query: 3    LSMLESLLEXXXXXXXXXXXXXXHATNPSKKKQSASLNRHKMINALAQNSTFWILKIINA 182
            LS LESLLE               + NPSKKKQSAS NRHKMI +LAQNS FWILKI++A
Sbjct: 1005 LSTLESLLEKNLKWASKPFKKKRSSENPSKKKQSASRNRHKMIGSLAQNSIFWILKILDA 1064

Query: 183  GNFPEFELQRILDIFKGVLVAYFDSKKSQMKSEFLREIFRRRPWIGHHLFGFLLEKCSSA 362
              FPE ELQ   DIFK VLV Y DSKK Q+KS FL+EIFRRRPWIGHHL GFLLEKC +A
Sbjct: 1065 RKFPESELQGFFDIFKRVLVGYLDSKKIQIKSNFLKEIFRRRPWIGHHLLGFLLEKCGNA 1124

Query: 363  KSRFRQVEALGLVIEILKSLVPSKKKADESGQAVSKKMLK 482
            +S FR+VEAL LVIEILKS V         GQ  SKKMLK
Sbjct: 1125 ESEFRRVEALDLVIEILKSHV--FFNTGVKGQEASKKMLK 1162


>ref|XP_002263595.1| PREDICTED: DNA polymerase V-like [Vitis vinifera]
          Length = 1280

 Score =  188 bits (477), Expect = 4e-46
 Identities = 104/160 (65%), Positives = 113/160 (70%)
 Frame = +3

Query: 3    LSMLESLLEXXXXXXXXXXXXXXHATNPSKKKQSASLNRHKMINALAQNSTFWILKIINA 182
            LS LESLLE               + NPSKKKQSAS NRHKMI +LAQNS FWILKI++A
Sbjct: 1048 LSTLESLLEKNLKWASKPFKKKRSSENPSKKKQSASRNRHKMIGSLAQNSIFWILKILDA 1107

Query: 183  GNFPEFELQRILDIFKGVLVAYFDSKKSQMKSEFLREIFRRRPWIGHHLFGFLLEKCSSA 362
              FPE ELQ   DIFK VLV Y DSKK Q+KS FL+EIFRRRPWIGHHL GFLLEKC +A
Sbjct: 1108 RKFPESELQGFFDIFKRVLVGYLDSKKIQIKSNFLKEIFRRRPWIGHHLLGFLLEKCGNA 1167

Query: 363  KSRFRQVEALGLVIEILKSLVPSKKKADESGQAVSKKMLK 482
            +S FR+VEAL LVIEILKS V         GQ  SKKMLK
Sbjct: 1168 ESEFRRVEALDLVIEILKSHV--FFNTGVKGQEASKKMLK 1205


>emb|CAN80013.1| hypothetical protein VITISV_030078 [Vitis vinifera]
          Length = 1395

 Score =  188 bits (477), Expect = 4e-46
 Identities = 104/160 (65%), Positives = 113/160 (70%)
 Frame = +3

Query: 3    LSMLESLLEXXXXXXXXXXXXXXHATNPSKKKQSASLNRHKMINALAQNSTFWILKIINA 182
            LS LESLLE               + NPSKKKQSAS NRHKMI +LAQNS FWILKI++A
Sbjct: 1163 LSTLESLLEKNLKWASKPFKKKRSSENPSKKKQSASRNRHKMIGSLAQNSIFWILKILDA 1222

Query: 183  GNFPEFELQRILDIFKGVLVAYFDSKKSQMKSEFLREIFRRRPWIGHHLFGFLLEKCSSA 362
              FPE ELQ   DIFK VLV Y DSKK Q+KS FL+EIFRRRPWIGHHL GFLLEKC +A
Sbjct: 1223 RKFPESELQGFFDIFKRVLVGYLDSKKIQIKSNFLKEIFRRRPWIGHHLLGFLLEKCGNA 1282

Query: 363  KSRFRQVEALGLVIEILKSLVPSKKKADESGQAVSKKMLK 482
            +S FR+VEAL LVIEILKS V         GQ  SKKMLK
Sbjct: 1283 ESEFRRVEALDLVIEILKSHV--FFNTGVKGQEASKKMLK 1320


>ref|XP_002313953.1| predicted protein [Populus trichocarpa] gi|222850361|gb|EEE87908.1|
           predicted protein [Populus trichocarpa]
          Length = 280

 Score =  187 bits (476), Expect = 6e-46
 Identities = 104/160 (65%), Positives = 115/160 (71%)
 Frame = +3

Query: 3   LSMLESLLEXXXXXXXXXXXXXXHATNPSKKKQSASLNRHKMINALAQNSTFWILKIINA 182
           L  LESLLE               A N SKKKQ A   RHKMI +LAQ+STFWILKII A
Sbjct: 48  LPTLESLLEKNLKLASKPLKKKKSAGNLSKKKQLAMWKRHKMIVSLAQDSTFWILKIIGA 107

Query: 183 GNFPEFELQRILDIFKGVLVAYFDSKKSQMKSEFLREIFRRRPWIGHHLFGFLLEKCSSA 362
            NFPE ELQ ++DIFKG L  YF+SK SQ+KS+FL EIFRRRPWIGHHLFGFLLEKCS A
Sbjct: 108 RNFPECELQGVIDIFKGELARYFESKTSQIKSDFLTEIFRRRPWIGHHLFGFLLEKCSRA 167

Query: 363 KSRFRQVEALGLVIEILKSLVPSKKKADESGQAVSKKMLK 482
           K  FR+VEAL LVIEILKS+V S    DES +  SKK+LK
Sbjct: 168 KLEFRRVEALDLVIEILKSMVSSGN--DESNRNASKKVLK 205


>ref|XP_002300310.1| predicted protein [Populus trichocarpa] gi|222847568|gb|EEE85115.1|
           predicted protein [Populus trichocarpa]
          Length = 280

 Score =  177 bits (448), Expect = 1e-42
 Identities = 100/160 (62%), Positives = 113/160 (70%)
 Frame = +3

Query: 3   LSMLESLLEXXXXXXXXXXXXXXHATNPSKKKQSASLNRHKMINALAQNSTFWILKIINA 182
           L  LESLLE               A   SKKKQSA   RHKMI +LAQ+STFWILKII+A
Sbjct: 48  LPNLESLLERNLKLASKPLKRKKSAGILSKKKQSAMWKRHKMIVSLAQDSTFWILKIIDA 107

Query: 183 GNFPEFELQRILDIFKGVLVAYFDSKKSQMKSEFLREIFRRRPWIGHHLFGFLLEKCSSA 362
            NF E EL+ + DIFKG L  YF+SK SQ+KSEFL+EIFRRRPWIGHHL  FLLE C SA
Sbjct: 108 RNFSESELKGVFDIFKGELARYFESKTSQIKSEFLKEIFRRRPWIGHHLLEFLLEICGSA 167

Query: 363 KSRFRQVEALGLVIEILKSLVPSKKKADESGQAVSKKMLK 482
           KS FR+V AL L+IEILKS+VPS    DES +  SKK+LK
Sbjct: 168 KSEFRRVGALDLLIEILKSMVPSGN--DESNRDASKKILK 205


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