BLASTX nr result

ID: Panax21_contig00024120 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00024120
         (473 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002328708.1| predicted protein [Populus trichocarpa] gi|2...    81   1e-13
ref|XP_002263486.2| PREDICTED: uncharacterized protein LOC100249...    78   9e-13
emb|CAN68216.1| hypothetical protein VITISV_008346 [Vitis vinifera]    76   3e-12

>ref|XP_002328708.1| predicted protein [Populus trichocarpa] gi|222839006|gb|EEE77357.1|
           predicted protein [Populus trichocarpa]
          Length = 327

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 53/139 (38%), Positives = 80/139 (57%), Gaps = 4/139 (2%)
 Frame = +3

Query: 3   GKELSRSELFVLTRTRKDGRPVNEASAAVISQLQECTTEQQDTSDDSQKNQDNMLSEIMX 182
           GKE +R+EL++ TRTRKDG+P+N  +A +IS+L+E  T++Q TS+DS  + D+   ++M 
Sbjct: 171 GKEPTRAELYIKTRTRKDGQPMNNVAAEIISKLREQETQKQQTSNDS-NDWDDAFFQVMG 229

Query: 183 XXXXXXXXXXXXXFSPLLNISGSSPTHAEALRMVTE----ANSEVREMKERMATMEQTCA 350
                         +P  ++ G    H E +RM +E    AN EV +M  +M  ME+  A
Sbjct: 230 EEKNGHVRTYGLGPNP-SDLWGQKLGHIELIRMASEAKKSANEEVSKMLGKMEAMEKKYA 288

Query: 351 QMVTQMSTMIVMMSSMQKF 407
            M TQ++    M SSMQ F
Sbjct: 289 SMETQIAR---MASSMQNF 304


>ref|XP_002263486.2| PREDICTED: uncharacterized protein LOC100249234 [Vitis vinifera]
          Length = 675

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 49/139 (35%), Positives = 76/139 (54%), Gaps = 3/139 (2%)
 Frame = +3

Query: 3   GKELSRSELFVLTRTRKDGRPVNEASAAVISQLQECTTEQQDTSDDSQKNQDNMLSEIMX 182
           G E +R+ELF++T  RKDG PV+E SA +I+QLQE        +   +   D++ S++M 
Sbjct: 540 GDEPTRAELFIVTHLRKDGTPVDETSANIITQLQERAQANPQPASHERVLHDDIFSQVMG 599

Query: 183 XXXXXXXXXXXXXFSPLLNISGSSPTHAEALRMVTEAN---SEVREMKERMATMEQTCAQ 353
                          P  +I G  P+ AEA+ + +EA    +EV ++KE+M  +E  CA+
Sbjct: 600 KDGHGRVRTYGLGPCP-SDIWGPRPSRAEAIAIASEAKKALNEVAKIKEKMEAVESKCAE 658

Query: 354 MVTQMSTMIVMMSSMQKFP 410
           M  QM+    M S++QK P
Sbjct: 659 MEVQMAE---MKSALQKSP 674


>emb|CAN68216.1| hypothetical protein VITISV_008346 [Vitis vinifera]
          Length = 1253

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 49/141 (34%), Positives = 76/141 (53%), Gaps = 5/141 (3%)
 Frame = +3

Query: 3   GKELSRSELFVLTRTRKDGRPVNEASAAVISQLQECTTEQQDTSDDSQKNQDNMLSEIMX 182
           G E +R+ELF++T  RKDG PV+E SA +I+QLQE        +   +   D++ S++M 
Sbjct: 516 GDEPTRAELFIVTHLRKDGTPVDETSANIITQLQERAQANPQPASHERVLHDDIFSQVMG 575

Query: 183 XXXXXXXXXXXXXFSPLLNISGSSPTHAEALRMVTEAN---SEVREMKERMATMEQTCAQ 353
                          P  +I G  P+ AEA+ + +EA    +EV ++KE+M  +E  CA+
Sbjct: 576 KDGHGRVRTYGLGPCP-SDIWGPRPSRAEAIAIASEAKKALNEVAKIKEKMEAVESKCAE 634

Query: 354 MVTQMSTM--IVMMSSMQKFP 410
           M  QM+ M   V  SS ++ P
Sbjct: 635 MEVQMAEMKKTVKTSSQRERP 655


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