BLASTX nr result

ID: Panax21_contig00024116 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00024116
         (404 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24150.3| unnamed protein product [Vitis vinifera]               82   1e-25
ref|XP_002525842.1| Ent-kaurene synthase B, chloroplast precurso...    72   1e-25
ref|XP_002525841.1| Ent-kaurene synthase B, chloroplast precurso...    73   4e-25
ref|XP_002533694.1| Ent-kaurene synthase B, chloroplast precurso...    75   4e-24
emb|CBY78876.1| KS protein [Aegilops tauschii]                         73   1e-23

>emb|CBI24150.3| unnamed protein product [Vitis vinifera]
          Length = 826

 Score = 82.4 bits (202), Expect(2) = 1e-25
 Identities = 43/75 (57%), Positives = 52/75 (69%), Gaps = 1/75 (1%)
 Frame = +3

Query: 162 RLVMVYQLERLGIDPFFRYEVEGVLSDANRRWMQRHEEIFLD-VSC*GAFRLLGMNGYDI 338
           RL +V  LERLGID +FR E+  VL +  R W+QR EEIF D  +C  AFR+L +NGYDI
Sbjct: 317 RLCLVDNLERLGIDRYFRMEIRSVLDETYRCWLQREEEIFADRATCAIAFRILRLNGYDI 376

Query: 339 SSGELAEFDEKDYYF 383
           SS  LA+F E D YF
Sbjct: 377 SSVPLAQFAEDDQYF 391



 Score = 59.3 bits (142), Expect(2) = 1e-25
 Identities = 29/54 (53%), Positives = 37/54 (68%)
 Frame = +1

Query: 1   GLGRSYGWKEAMQHQRSNGSLFNSPSTTAAVLVRLQDDRCLDYLFSLLKIYKNA 162
           G+GR   W+  M++Q  NGSL NSPS TAA L  LQ+  CL+YL SLL+ + NA
Sbjct: 252 GMGRLQDWEMVMKYQMKNGSLLNSPSATAAALSHLQNAGCLNYLRSLLEKFGNA 305


>ref|XP_002525842.1| Ent-kaurene synthase B, chloroplast precursor, putative [Ricinus
           communis] gi|223534847|gb|EEF36536.1| Ent-kaurene
           synthase B, chloroplast precursor, putative [Ricinus
           communis]
          Length = 775

 Score = 72.4 bits (176), Expect(2) = 1e-25
 Identities = 41/72 (56%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
 Frame = +3

Query: 162 RLVMVYQLERLGIDPFFRYEVEGVLSDANRRWMQRHEEIFLDVSC*G-AFRLLGMNGYDI 338
           RL ++  LE+LGID +   + E VL D  R WMQ  EEIFLD +C   AFRLL MNGY I
Sbjct: 289 RLSIIDTLEKLGIDSYVSEDKERVLDDICRCWMQGSEEIFLDPTCCAMAFRLLRMNGYAI 348

Query: 339 SSGELAEFDEKD 374
           SS  LA FDEK+
Sbjct: 349 SSDALANFDEKE 360



 Score = 69.3 bits (168), Expect(2) = 1e-25
 Identities = 33/54 (61%), Positives = 39/54 (72%)
 Frame = +1

Query: 1   GLGRSYGWKEAMQHQRSNGSLFNSPSTTAAVLVRLQDDRCLDYLFSLLKIYKNA 162
           GL R   WKE M+ QRSNGSLFNSPS+TAA L+ L D +C +YL SL K + NA
Sbjct: 224 GLNRLNDWKEVMKFQRSNGSLFNSPSSTAAALIHLHDGKCFEYLNSLAKQFGNA 277


>ref|XP_002525841.1| Ent-kaurene synthase B, chloroplast precursor, putative [Ricinus
           communis] gi|223534846|gb|EEF36535.1| Ent-kaurene
           synthase B, chloroplast precursor, putative [Ricinus
           communis]
          Length = 778

 Score = 72.8 bits (177), Expect(2) = 4e-25
 Identities = 40/76 (52%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
 Frame = +3

Query: 162 RLVMVYQLERLGIDPFFRYEVEGVLSDANRRWMQRHEEIFLDVSC*G-AFRLLGMNGYDI 338
           RL ++  LE+LGID + R + E +L D  R WMQ  EEIF D +C   AFR+L  NGY I
Sbjct: 280 RLFVIDSLEKLGIDRYVREDKEKMLDDIYRCWMQGSEEIFSDPTCCAMAFRILRTNGYAI 339

Query: 339 SSGELAEFDEKDYYFY 386
           SS  LA FDEK+  FY
Sbjct: 340 SSDALANFDEKESLFY 355



 Score = 67.0 bits (162), Expect(2) = 4e-25
 Identities = 32/54 (59%), Positives = 38/54 (70%)
 Frame = +1

Query: 1   GLGRSYGWKEAMQHQRSNGSLFNSPSTTAAVLVRLQDDRCLDYLFSLLKIYKNA 162
           GL     WKE M+ QRSNGSLFNSPS+TAA L+ L D +C +YL SL K + NA
Sbjct: 215 GLNTLNDWKEVMKFQRSNGSLFNSPSSTAAALIHLHDGKCFEYLNSLTKKFGNA 268


>ref|XP_002533694.1| Ent-kaurene synthase B, chloroplast precursor, putative [Ricinus
           communis] gi|223526405|gb|EEF28689.1| Ent-kaurene
           synthase B, chloroplast precursor, putative [Ricinus
           communis]
          Length = 808

 Score = 74.7 bits (182), Expect(2) = 4e-24
 Identities = 41/78 (52%), Positives = 56/78 (71%), Gaps = 1/78 (1%)
 Frame = +3

Query: 162 RLVMVYQLERLGIDPFFRYEVEGVLSDANRRWMQRHEEIFLD-VSC*GAFRLLGMNGYDI 338
           RL+MV  LERLGID  FR E++ VL +  R W+Q +EEIFLD ++C  AFR+L +NGYD+
Sbjct: 230 RLLMVDILERLGIDRHFRKEIKLVLEETYRYWLQGNEEIFLDCITCAMAFRILRVNGYDV 289

Query: 339 SSGELAEFDEKDYYFYSV 392
           SS    +F E D++F S+
Sbjct: 290 SSDVFTQFTE-DHFFDSL 306



 Score = 61.6 bits (148), Expect(2) = 4e-24
 Identities = 29/54 (53%), Positives = 38/54 (70%)
 Frame = +1

Query: 1   GLGRSYGWKEAMQHQRSNGSLFNSPSTTAAVLVRLQDDRCLDYLFSLLKIYKNA 162
           G+G+   W+  M++QR NGSLFNSPSTTAA    L++  CL YL S+L+ Y NA
Sbjct: 165 GIGKFQDWEMVMKYQRKNGSLFNSPSTTAAAFSHLRNADCLQYLQSVLQKYGNA 218


>emb|CBY78876.1| KS protein [Aegilops tauschii]
          Length = 851

 Score = 73.2 bits (178), Expect(2) = 1e-23
 Identities = 39/79 (49%), Positives = 51/79 (64%), Gaps = 1/79 (1%)
 Frame = +3

Query: 159 CRLVMVYQLERLGIDPFFRYEVEGVLSDANRRWMQRHEEIFLDV-SC*GAFRLLGMNGYD 335
           C+L MV  LE++GI   F  E+EG+L  A   W+QR EEI +DV +C  AFRLL MNGYD
Sbjct: 347 CKLSMVDSLEKIGISRHFSSEIEGILDMAYSFWLQRDEEIMMDVATCAMAFRLLRMNGYD 406

Query: 336 ISSGELAEFDEKDYYFYSV 392
           +SS EL+   E   +  S+
Sbjct: 407 VSSDELSHLAEASNFHNSL 425



 Score = 61.2 bits (147), Expect(2) = 1e-23
 Identities = 29/44 (65%), Positives = 31/44 (70%)
 Frame = +1

Query: 1   GLGRSYGWKEAMQHQRSNGSLFNSPSTTAAVLVRLQDDRCLDYL 132
           GLG    W E M+ QR NGSLFNSPSTTAA LV   DD+ LDYL
Sbjct: 283 GLGNLLDWNEVMKFQRKNGSLFNSPSTTAAALVHNYDDKALDYL 326


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