BLASTX nr result

ID: Panax21_contig00024099 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00024099
         (566 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002312428.1| predicted protein [Populus trichocarpa] gi|1...    90   3e-16
ref|XP_002526596.1| ribose-5-phosphate isomerase, putative [Rici...    89   6e-16
ref|XP_002314818.1| predicted protein [Populus trichocarpa] gi|2...    88   8e-16
ref|XP_002284079.1| PREDICTED: probable ribose-5-phosphate isome...    88   1e-15
emb|CBI16263.3| unnamed protein product [Vitis vinifera]               87   2e-15

>ref|XP_002312428.1| predicted protein [Populus trichocarpa] gi|118488529|gb|ABK96077.1|
           unknown [Populus trichocarpa]
           gi|222852248|gb|EEE89795.1| predicted protein [Populus
           trichocarpa]
          Length = 264

 Score = 89.7 bits (221), Expect = 3e-16
 Identities = 49/69 (71%), Positives = 56/69 (81%), Gaps = 1/69 (1%)
 Frame = +3

Query: 363 MALACPRFMISDKTTADS-PLTVSPASPAILTQDELKKIAAYKAVEFVQSGMVLGLGTGS 539
           MA+ CP F+ S+K + +S  ++ S  SP ILTQDELKKIAAYKAVEFVQSGMVLGLGTGS
Sbjct: 1   MAIPCPPFIGSEKLSIESGAMSPSSPSPLILTQDELKKIAAYKAVEFVQSGMVLGLGTGS 60

Query: 540 TACHAVARI 566
           TA HAV RI
Sbjct: 61  TAKHAVDRI 69


>ref|XP_002526596.1| ribose-5-phosphate isomerase, putative [Ricinus communis]
           gi|223534036|gb|EEF35755.1| ribose-5-phosphate
           isomerase, putative [Ricinus communis]
          Length = 264

 Score = 88.6 bits (218), Expect = 6e-16
 Identities = 47/68 (69%), Positives = 54/68 (79%)
 Frame = +3

Query: 363 MALACPRFMISDKTTADSPLTVSPASPAILTQDELKKIAAYKAVEFVQSGMVLGLGTGST 542
           MA+ CP F+ S+K  +   +  SP SP +L+QDELKKIAAYKAVEFVQSGMVLGLGTGST
Sbjct: 1   MAIPCPPFIASEKLAS---MESSPLSPPLLSQDELKKIAAYKAVEFVQSGMVLGLGTGST 57

Query: 543 ACHAVARI 566
           A HAV RI
Sbjct: 58  AKHAVDRI 65


>ref|XP_002314818.1| predicted protein [Populus trichocarpa] gi|222863858|gb|EEF00989.1|
           predicted protein [Populus trichocarpa]
          Length = 265

 Score = 88.2 bits (217), Expect = 8e-16
 Identities = 47/68 (69%), Positives = 50/68 (73%)
 Frame = +3

Query: 363 MALACPRFMISDKTTADSPLTVSPASPAILTQDELKKIAAYKAVEFVQSGMVLGLGTGST 542
           MA+ CP    S+    +S     P SP ILTQDELKKIAAYKAVEFVQSGMVLGLGTGST
Sbjct: 1   MAIPCPSIFGSEMVPIESGAMSPPPSPLILTQDELKKIAAYKAVEFVQSGMVLGLGTGST 60

Query: 543 ACHAVARI 566
           A HAV RI
Sbjct: 61  AKHAVDRI 68


>ref|XP_002284079.1| PREDICTED: probable ribose-5-phosphate isomerase-like [Vitis
           vinifera]
          Length = 269

 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 47/74 (63%), Positives = 59/74 (79%), Gaps = 6/74 (8%)
 Frame = +3

Query: 363 MALACPRFMISDKTTADSPLTVSPASPA------ILTQDELKKIAAYKAVEFVQSGMVLG 524
           MA+A P F+ S+K+  ++ + +SP+SP+      ILTQDELKKIAAYKAVE+V+SGMVLG
Sbjct: 1   MAIAYPHFIGSEKSAMETGIILSPSSPSPSLPHVILTQDELKKIAAYKAVEYVESGMVLG 60

Query: 525 LGTGSTACHAVARI 566
           LGTGSTA HAV RI
Sbjct: 61  LGTGSTAKHAVDRI 74


>emb|CBI16263.3| unnamed protein product [Vitis vinifera]
          Length = 322

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 50/83 (60%), Positives = 60/83 (72%), Gaps = 10/83 (12%)
 Frame = +3

Query: 348 THFF----HMALACPRFMISDKTTADSPLTVSPAS------PAILTQDELKKIAAYKAVE 497
           T FF    +MA+A P F+ S K+  ++ +  SP+S      P ILTQDELKKIAAYKAVE
Sbjct: 10  TDFFVLGIYMAIAYPHFIGSQKSAMETGMISSPSSSSPSRPPVILTQDELKKIAAYKAVE 69

Query: 498 FVQSGMVLGLGTGSTACHAVARI 566
           +V+SGMVLGLGTGSTA HAV RI
Sbjct: 70  YVESGMVLGLGTGSTAKHAVDRI 92


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