BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00024096
         (587 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_005090486.1| ribosomal protein S4 (mitochondrion) [Lotus ...   154   8e-36
dbj|BAD83538.2| ribosomal protein S4, partial (mitochondrion) [N...   149   3e-34
ref|YP_005090450.1| ribosomal protein S4 (mitochondrion) [Millet...   147   1e-33
ref|YP_003587235.1| ribosomal protein S4 [Citrullus lanatus] gi|...   146   2e-33
ref|YP_717175.1| ribosomal protein S4 [Brassica napus] gi|375911...   140   1e-31

>ref|YP_005090486.1| ribosomal protein S4 (mitochondrion) [Lotus japonicus]
           gi|357197350|gb|AET62946.1| ribosomal protein S4
           (mitochondrion) [Lotus japonicus]
          Length = 358

 Score =  154 bits (390), Expect = 8e-36
 Identities = 73/82 (89%), Positives = 77/82 (93%), Gaps = 3/82 (3%)
 Frame = +1

Query: 349 PTR---PIVYNSSFYSNSTYCSASPHQFTMKRKRKRVELPTHYLEVNYRTLKAVVFYGPS 519
           PTR   PIVYNSS YSNSTYCS+SPHQFTMKR+ KR+ELPTHYLEVNYRTLKAVVFYGP+
Sbjct: 272 PTRTRSPIVYNSSLYSNSTYCSSSPHQFTMKRRIKRIELPTHYLEVNYRTLKAVVFYGPN 331

Query: 520 IGHIPHDIRLKDLNLLLWSGNG 585
           IGHIPHDIRLKDLNLLLWSGNG
Sbjct: 332 IGHIPHDIRLKDLNLLLWSGNG 353


>dbj|BAD83538.2| ribosomal protein S4, partial (mitochondrion) [Nicotiana tabacum]
          Length = 349

 Score =  149 bits (376), Expect = 3e-34
 Identities = 72/82 (87%), Positives = 74/82 (90%), Gaps = 3/82 (3%)
 Frame = +1

Query: 349 PTR---PIVYNSSFYSNSTYCSASPHQFTMKRKRKRVELPTHYLEVNYRTLKAVVFYGPS 519
           PTR   PIVYNSS YSNSTYCSASPHQFT K K KR+ELPTHYLEVNYRTLKAVVFYGP+
Sbjct: 263 PTRTRSPIVYNSSLYSNSTYCSASPHQFTKKIKIKRIELPTHYLEVNYRTLKAVVFYGPN 322

Query: 520 IGHIPHDIRLKDLNLLLWSGNG 585
           IGHIPHDIRLKDLNLLLWSG G
Sbjct: 323 IGHIPHDIRLKDLNLLLWSGKG 344


>ref|YP_005090450.1| ribosomal protein S4 (mitochondrion) [Millettia pinnata]
           gi|372450274|ref|YP_005090457.1| ribosomal protein S4
           (mitochondrion) [Millettia pinnata]
           gi|357197313|gb|AET62910.1| ribosomal protein S4
           (mitochondrion) [Millettia pinnata]
           gi|357197320|gb|AET62917.1| ribosomal protein S4
           (mitochondrion) [Millettia pinnata]
          Length = 358

 Score =  147 bits (372), Expect = 1e-33
 Identities = 71/82 (86%), Positives = 75/82 (91%), Gaps = 3/82 (3%)
 Frame = +1

Query: 349 PTR---PIVYNSSFYSNSTYCSASPHQFTMKRKRKRVELPTHYLEVNYRTLKAVVFYGPS 519
           PTR   PIV  SS YSNSTYCS+SPHQFTMKR+ KR+ELPTHYLEVNYRTLKAVVFYGP+
Sbjct: 272 PTRTRSPIVDYSSLYSNSTYCSSSPHQFTMKRRIKRIELPTHYLEVNYRTLKAVVFYGPN 331

Query: 520 IGHIPHDIRLKDLNLLLWSGNG 585
           IGHIPHDIRLKDLNLLLWSGNG
Sbjct: 332 IGHIPHDIRLKDLNLLLWSGNG 353


>ref|YP_003587235.1| ribosomal protein S4 [Citrullus lanatus]
           gi|259156791|gb|ACV96653.1| ribosomal protein S4
           [Citrullus lanatus]
          Length = 355

 Score =  146 bits (369), Expect = 2e-33
 Identities = 72/82 (87%), Positives = 74/82 (90%), Gaps = 3/82 (3%)
 Frame = +1

Query: 349 PTR---PIVYNSSFYSNSTYCSASPHQFTMKRKRKRVELPTHYLEVNYRTLKAVVFYGPS 519
           PTR   PIVYNSS YSNSTYCSASPHQFTMK K KR+ELPTHYLEVNYRTLKAVVFYGP+
Sbjct: 269 PTRTRSPIVYNSSLYSNSTYCSASPHQFTMKSKIKRIELPTHYLEVNYRTLKAVVFYGPN 328

Query: 520 IGHIPHDIRLKDLNLLLWSGNG 585
           IGHIPHDIRLKDLNL L SGNG
Sbjct: 329 IGHIPHDIRLKDLNLPLRSGNG 350


>ref|YP_717175.1| ribosomal protein S4 [Brassica napus] gi|37591124|dbj|BAC98926.1|
           ribosomal protein S4 [Brassica napus]
          Length = 362

 Score =  140 bits (354), Expect = 1e-31
 Identities = 74/109 (67%), Positives = 79/109 (72%), Gaps = 5/109 (4%)
 Frame = +1

Query: 274 HD*TKRNFDQSXXXXXXXXXXXXXXPTR---PIVYNSSF--YSNSTYCSASPHQFTMKRK 438
           H   KRN  +S              PTR   PIVYNSS   YSNSTYC ASPH+ TMKR+
Sbjct: 249 HKRMKRNLLKSLFLSKRRKEKNLNLPTRTISPIVYNSSLSLYSNSTYCFASPHKLTMKRR 308

Query: 439 RKRVELPTHYLEVNYRTLKAVVFYGPSIGHIPHDIRLKDLNLLLWSGNG 585
            KR+ELPTHYLEVNYRT KAVVFYGP+IGHIPHDIRLKDLNLLLWS NG
Sbjct: 309 IKRIELPTHYLEVNYRTPKAVVFYGPNIGHIPHDIRLKDLNLLLWSRNG 357