BLASTX nr result

ID: Panax21_contig00024090 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00024090
         (584 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321992.1| predicted protein [Populus trichocarpa] gi|2...    98   1e-18
gb|AFK41921.1| unknown [Medicago truncatula]                           93   3e-17
emb|CBI23018.3| unnamed protein product [Vitis vinifera]               93   4e-17
ref|XP_002272419.1| PREDICTED: uncharacterized protein LOC100260...    93   4e-17
ref|XP_002516652.1| conserved hypothetical protein [Ricinus comm...    92   5e-17

>ref|XP_002321992.1| predicted protein [Populus trichocarpa] gi|222868988|gb|EEF06119.1|
           predicted protein [Populus trichocarpa]
          Length = 203

 Score = 97.8 bits (242), Expect = 1e-18
 Identities = 68/182 (37%), Positives = 90/182 (49%), Gaps = 13/182 (7%)
 Frame = +1

Query: 19  PPGMLTPPMRTLASIPFKWEEAPGKPIAVAGNIGRNSPPLKSKTVRCLVQPPPRL----T 186
           P GMLTPP+ TLAS+PFKWEEAPGKP          +   K K  RCL  PP  L     
Sbjct: 31  PAGMLTPPIHTLASVPFKWEEAPGKPRPSC------ATQSKPKFARCLELPPRLLNEAKV 84

Query: 187 TNMPSPTTVLDGPYTGQS----KSFTLSSVKGTLIGR---KERFNLFSWRWGSYKESSIE 345
           +NMPSPTTV DGPY  +S    K  +LS+++    G    KER    S RWG +++++ E
Sbjct: 85  SNMPSPTTVFDGPYLPRSLSLGKGRSLSNLENLGCGEVNSKERVTFGSGRWGFFRKNNKE 144

Query: 346 GSMDFSSSVGA--FGVESISDSKVRMXXXXXXXXXXXXXXXXXXXXXXIYESLKQSVPWK 519
            +      +G    G E++   +V++                      I ES K +VPW 
Sbjct: 145 VAAPSHGDIGVNHGGREAV---RVKITRIRRRSSFLGLSHTRSHFWTDICESFKHAVPWT 201

Query: 520 RR 525
           RR
Sbjct: 202 RR 203


>gb|AFK41921.1| unknown [Medicago truncatula]
          Length = 210

 Score = 93.2 bits (230), Expect = 3e-17
 Identities = 69/183 (37%), Positives = 91/183 (49%), Gaps = 15/183 (8%)
 Frame = +1

Query: 37  PPMRTLASIPFKWEEAPGKPIAVAGNIGRNSPPLKSKTVRCLVQP---PPRL-------T 186
           PP  T+ SIPFKWEEAPGKP +         P L+ + V  +V+    PPRL       T
Sbjct: 44  PPRTTVISIPFKWEEAPGKPRSC-----HTRPELREREVNNVVRALELPPRLLSLEREST 98

Query: 187 TNM--PSPTTVLDGPYTGQSKSFTLSSVKGTLIGRKERFNLFSWRWGSYKESS---IEGS 351
            N+  PSPTTVL+GPY G++ SFT S         K+  N  S RWG  K+++    EGS
Sbjct: 99  GNIYAPSPTTVLEGPYVGRAVSFTTSYRDN---NNKDSVNFGSSRWGGLKKNNRIDCEGS 155

Query: 352 MDFSSSVGAFGVESISDSKVRMXXXXXXXXXXXXXXXXXXXXXXIYESLKQSVPWKRRQE 531
            DF SS    G + +  ++V+                       IY S KQ VPW+R+QE
Sbjct: 156 FDF-SSWSVEGGDKVKITRVK--------RRGSFSHGTSHFWASIYGSFKQVVPWRRKQE 206

Query: 532 KMR 540
           K +
Sbjct: 207 KQQ 209


>emb|CBI23018.3| unnamed protein product [Vitis vinifera]
          Length = 194

 Score = 92.8 bits (229), Expect = 4e-17
 Identities = 57/121 (47%), Positives = 74/121 (61%), Gaps = 5/121 (4%)
 Frame = +1

Query: 7   KKYEPPGMLTPPMRTLASIPFKWEEAPGKPIAVAGNIGRNSPPLKSKTVRCLVQPPPRLT 186
           KK EPPGMLTPP++   S+PF+WEEAPGKP   A N G      K+++ RCL   PPR++
Sbjct: 27  KKEEPPGMLTPPLQAAVSVPFEWEEAPGKP--RAWNRGE-----KARSARCL-DLPPRMS 78

Query: 187 -----TNMPSPTTVLDGPYTGQSKSFTLSSVKGTLIGRKERFNLFSWRWGSYKESSIEGS 351
                +++ SPTTVL+GPY G+S SF   +  G   G KER    S RW S KE+   G 
Sbjct: 79  ARVKISDVCSPTTVLEGPYVGRSVSF--GNGGGKSDGAKERSRFGSSRWMSLKENGEVGG 136

Query: 352 M 354
           +
Sbjct: 137 V 137


>ref|XP_002272419.1| PREDICTED: uncharacterized protein LOC100260674 [Vitis vinifera]
          Length = 189

 Score = 92.8 bits (229), Expect = 4e-17
 Identities = 57/121 (47%), Positives = 74/121 (61%), Gaps = 5/121 (4%)
 Frame = +1

Query: 7   KKYEPPGMLTPPMRTLASIPFKWEEAPGKPIAVAGNIGRNSPPLKSKTVRCLVQPPPRLT 186
           KK EPPGMLTPP++   S+PF+WEEAPGKP   A N G      K+++ RCL   PPR++
Sbjct: 22  KKEEPPGMLTPPLQAAVSVPFEWEEAPGKP--RAWNRGE-----KARSARCL-DLPPRMS 73

Query: 187 -----TNMPSPTTVLDGPYTGQSKSFTLSSVKGTLIGRKERFNLFSWRWGSYKESSIEGS 351
                +++ SPTTVL+GPY G+S SF   +  G   G KER    S RW S KE+   G 
Sbjct: 74  ARVKISDVCSPTTVLEGPYVGRSVSF--GNGGGKSDGAKERSRFGSSRWMSLKENGEVGG 131

Query: 352 M 354
           +
Sbjct: 132 V 132


>ref|XP_002516652.1| conserved hypothetical protein [Ricinus communis]
           gi|223544147|gb|EEF45671.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 218

 Score = 92.4 bits (228), Expect = 5e-17
 Identities = 61/148 (41%), Positives = 81/148 (54%), Gaps = 25/148 (16%)
 Frame = +1

Query: 7   KKYEPPGMLTPPMRTLASIPFKWEEAPGKPIAVAGN--IGRNSPPLKSKTVRCLVQPPPR 180
           ++ + PG+LTPP+   AS+PFKWEEAPGKP     N     N+   K KT +  +  PPR
Sbjct: 31  QQQQQPGLLTPPIHAPASVPFKWEEAPGKPRPSCTNNKSNSNNHHPKPKTAKRCLDLPPR 90

Query: 181 L------TTNMPSPTTVLDGPYTGQ----------SKSFTLSSVKG-TLIGRKERFNLFS 309
           L        N+PSPTTVLDGPY G           S+S +LS  KG + IG ++     S
Sbjct: 91  LLFEASKVNNIPSPTTVLDGPYMGTTTTRDDHQSLSRSRSLSFGKGRSFIGLQKLNKKGS 150

Query: 310 WRWGSYKESS------IEGSMDFSSSVG 375
            RWGS+++ S       +GS+DFS   G
Sbjct: 151 SRWGSFRKDSNTKEVVCDGSVDFSVPCG 178


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