BLASTX nr result

ID: Panax21_contig00024085 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00024085
         (917 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAX96757.1| hAT family dimerisation domain, putative [Oryza s...   119   2e-44
ref|NP_001067616.1| Os11g0247800 [Oryza sativa Japonica Group] g...   119   2e-44
gb|EEE51924.1| hypothetical protein OsJ_33534 [Oryza sativa Japo...   119   2e-44
ref|XP_002319808.1| predicted protein [Populus trichocarpa] gi|2...   115   2e-37
ref|XP_003615119.1| Zinc finger MYM-type protein [Medicago trunc...   104   3e-34

>gb|AAX96757.1| hAT family dimerisation domain, putative [Oryza sativa Japonica
           Group] gi|77549563|gb|ABA92360.1| hAT family
           dimerisation domain containing protein [Oryza sativa
           Japonica Group]
          Length = 1071

 Score =  119 bits (298), Expect(2) = 2e-44
 Identities = 61/115 (53%), Positives = 74/115 (64%), Gaps = 4/115 (3%)
 Frame = -2

Query: 334 KRSFRPTWFKKFEWLEYSISKDAAFCFCCYLFVNSNR----VDAFTKKGFSNWKKAIERF 167
           +RSF  +WFK   WLEYSI+KDAAFCF CYLF         VDAFT KGF+NWK A   F
Sbjct: 147 QRSFHDSWFKMHNWLEYSIAKDAAFCFYCYLFKQPRPDNFGVDAFTSKGFTNWKHATGSF 206

Query: 166 QEHVGASNSAHNDARIQLQGFKNQRQSVSHILLAQGQEMEVAYRTRLTAALDVTR 2
            EHVG  +S HN AR   + FKNQRQSVS+ + +  +++E  Y  R+T  L V R
Sbjct: 207 NEHVGKVDSFHNRARKHCEDFKNQRQSVSYKMDSGSKKLEQQYYGRITMILGVVR 261



 Score = 86.7 bits (213), Expect(2) = 2e-44
 Identities = 43/70 (61%), Positives = 49/70 (70%)
 Frame = -3

Query: 540 VDSSNNQIPSSEASGDFNNSRVEFNPNDIVSDPGLRKSIEDFAIVIRDQVRREYLTRGPC 361
           V++  + IP  E     N+  VE NP DIV+DPGLRK IE F I IRD VRREYL+RGPC
Sbjct: 73  VETVGSNIPQPEQE-PHNSETVELNPADIVADPGLRKPIEQFHIDIRDAVRREYLSRGPC 131

Query: 360 QPIAHNYPQK 331
           QPI H YPQK
Sbjct: 132 QPIGHKYPQK 141


>ref|NP_001067616.1| Os11g0247800 [Oryza sativa Japonica Group]
           gi|62734649|gb|AAX96758.1| hAT family dimerisation
           domain, putative [Oryza sativa Japonica Group]
           gi|77549562|gb|ABA92359.1| hAT family dimerisation
           domain containing protein [Oryza sativa Japonica Group]
           gi|113644838|dbj|BAF27979.1| Os11g0247800 [Oryza sativa
           Japonica Group]
          Length = 1050

 Score =  119 bits (298), Expect(2) = 2e-44
 Identities = 61/115 (53%), Positives = 74/115 (64%), Gaps = 4/115 (3%)
 Frame = -2

Query: 334 KRSFRPTWFKKFEWLEYSISKDAAFCFCCYLFVNSNR----VDAFTKKGFSNWKKAIERF 167
           +RSF  +WFK   WLEYSI+KDAAFCF CYLF         VDAFT KGF+NWK A   F
Sbjct: 323 QRSFHDSWFKMHNWLEYSIAKDAAFCFYCYLFKQPRPDNFGVDAFTSKGFTNWKHATGSF 382

Query: 166 QEHVGASNSAHNDARIQLQGFKNQRQSVSHILLAQGQEMEVAYRTRLTAALDVTR 2
            EHVG  +S HN AR   + FKNQRQSVS+ + +  +++E  Y  R+T  L V R
Sbjct: 383 NEHVGKVDSFHNRARKHCEDFKNQRQSVSYKMDSGSKKLEQQYYGRITMILGVVR 437



 Score = 86.7 bits (213), Expect(2) = 2e-44
 Identities = 43/70 (61%), Positives = 49/70 (70%)
 Frame = -3

Query: 540 VDSSNNQIPSSEASGDFNNSRVEFNPNDIVSDPGLRKSIEDFAIVIRDQVRREYLTRGPC 361
           V++  + IP  E     N+  VE NP DIV+DPGLRK IE F I IRD VRREYL+RGPC
Sbjct: 249 VETVGSNIPQPEQE-PHNSETVELNPADIVADPGLRKPIEQFHIDIRDAVRREYLSRGPC 307

Query: 360 QPIAHNYPQK 331
           QPI H YPQK
Sbjct: 308 QPIGHKYPQK 317


>gb|EEE51924.1| hypothetical protein OsJ_33534 [Oryza sativa Japonica Group]
          Length = 1002

 Score =  119 bits (298), Expect(2) = 2e-44
 Identities = 61/115 (53%), Positives = 74/115 (64%), Gaps = 4/115 (3%)
 Frame = -2

Query: 334 KRSFRPTWFKKFEWLEYSISKDAAFCFCCYLFVNSNR----VDAFTKKGFSNWKKAIERF 167
           +RSF  +WFK   WLEYSI+KDAAFCF CYLF         VDAFT KGF+NWK A   F
Sbjct: 275 QRSFHDSWFKMHNWLEYSIAKDAAFCFYCYLFKQPRPDNFGVDAFTSKGFTNWKHATGSF 334

Query: 166 QEHVGASNSAHNDARIQLQGFKNQRQSVSHILLAQGQEMEVAYRTRLTAALDVTR 2
            EHVG  +S HN AR   + FKNQRQSVS+ + +  +++E  Y  R+T  L V R
Sbjct: 335 NEHVGKVDSFHNRARKHCEDFKNQRQSVSYKMDSGSKKLEQQYYGRITMILGVVR 389



 Score = 86.7 bits (213), Expect(2) = 2e-44
 Identities = 43/70 (61%), Positives = 49/70 (70%)
 Frame = -3

Query: 540 VDSSNNQIPSSEASGDFNNSRVEFNPNDIVSDPGLRKSIEDFAIVIRDQVRREYLTRGPC 361
           V++  + IP  E     N+  VE NP DIV+DPGLRK IE F I IRD VRREYL+RGPC
Sbjct: 201 VETVGSNIPQPEQE-PHNSETVELNPADIVADPGLRKPIEQFHIDIRDAVRREYLSRGPC 259

Query: 360 QPIAHNYPQK 331
           QPI H YPQK
Sbjct: 260 QPIGHKYPQK 269


>ref|XP_002319808.1| predicted protein [Populus trichocarpa] gi|222858184|gb|EEE95731.1|
           predicted protein [Populus trichocarpa]
          Length = 788

 Score =  115 bits (289), Expect(2) = 2e-37
 Identities = 57/115 (49%), Positives = 75/115 (65%), Gaps = 1/115 (0%)
 Frame = -2

Query: 343 LSPKRSFRPTWFKKFE-WLEYSISKDAAFCFCCYLFVNSNRVDAFTKKGFSNWKKAIERF 167
           +S  R F P WF  +  WLEYSI+KDAAFC  CYLF +   VD+F  +GFSNWKK  ERF
Sbjct: 87  ISTLRRFNPAWFGAYPTWLEYSIAKDAAFCLYCYLFKSKGGVDSFVGEGFSNWKKK-ERF 145

Query: 166 QEHVGASNSAHNDARIQLQGFKNQRQSVSHILLAQGQEMEVAYRTRLTAALDVTR 2
             H+G SNS HN ARI+ +   N++QS+  +L  Q  + +  YRTRL A+++  R
Sbjct: 146 DLHIGKSNSCHNVARIKCENLMNEKQSIMTLLSEQTVKSQSDYRTRLNASIECAR 200



 Score = 67.0 bits (162), Expect(2) = 2e-37
 Identities = 32/82 (39%), Positives = 49/82 (59%)
 Frame = -3

Query: 573 MDKYLIKRQRTVDSSNNQIPSSEASGDFNNSRVEFNPNDIVSDPGLRKSIEDFAIVIRDQ 394
           +DKY  KR+   D  + +  S         S +E NP+ +++DPGLR+ I ++ I  RD 
Sbjct: 3   LDKYF-KRKSLEDEESIKASSHVTQSSSKKSHIEINPDTLLADPGLRRPIYEYHINDRDA 61

Query: 393 VRREYLTRGPCQPIAHNYPQKE 328
           +RR YL +GPCQP   ++PQK+
Sbjct: 62  IRRAYLQKGPCQPSHCDFPQKQ 83


>ref|XP_003615119.1| Zinc finger MYM-type protein [Medicago truncatula]
           gi|355516454|gb|AES98077.1| Zinc finger MYM-type protein
           [Medicago truncatula]
          Length = 787

 Score =  104 bits (259), Expect(2) = 3e-34
 Identities = 49/115 (42%), Positives = 68/115 (59%), Gaps = 5/115 (4%)
 Frame = -2

Query: 331 RSFRPTWFKKFEWLEYSISKDAAFCFCCYLFVNSNRVD-----AFTKKGFSNWKKAIERF 167
           RSF  +W+ K+ W+EYS SKDAA+CF C+LF    R +      F K GF +WK A +  
Sbjct: 87  RSFSRSWYNKYTWIEYSESKDAAYCFYCFLFKQPGRAEHFGYEVFNKDGFKDWKHASQGL 146

Query: 166 QEHVGASNSAHNDARIQLQGFKNQRQSVSHILLAQGQEMEVAYRTRLTAALDVTR 2
           ++H+G  NS HN        +KNQRQSV+  +    +E E  Y+ RLT +LD T+
Sbjct: 147 KDHIGGHNSMHNKCIKHYDDYKNQRQSVTSKIARATRESEELYKIRLTCSLDCTK 201



 Score = 67.8 bits (164), Expect(2) = 3e-34
 Identities = 36/82 (43%), Positives = 52/82 (63%)
 Frame = -3

Query: 573 MDKYLIKRQRTVDSSNNQIPSSEASGDFNNSRVEFNPNDIVSDPGLRKSIEDFAIVIRDQ 394
           M K+L+ R R +++ N   P +E      N   EFNPN+IV DPGLRK I ++A  I+DQ
Sbjct: 1   MRKFLVDRTR-IENVNVVQPETEVEEPPPNVVNEFNPNEIVRDPGLRKQIWEYAPDIQDQ 59

Query: 393 VRREYLTRGPCQPIAHNYPQKE 328
           VRR Y+ +GP QP   ++P+ +
Sbjct: 60  VRRAYILKGPTQPNLASFPRTQ 81


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