BLASTX nr result

ID: Panax21_contig00024075 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00024075
         (643 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001240116.1| uncharacterized protein LOC100789593 [Glycin...   255   6e-66
ref|XP_004144419.1| PREDICTED: E3 ubiquitin-protein ligase MARCH...   254   7e-66
ref|XP_002268835.1| PREDICTED: E3 ubiquitin-protein ligase MARCH...   254   1e-65
ref|XP_002315373.1| predicted protein [Populus trichocarpa] gi|2...   252   5e-65
ref|XP_002513323.1| membrane associated ring finger 1,8, putativ...   251   1e-64

>ref|NP_001240116.1| uncharacterized protein LOC100789593 [Glycine max]
           gi|255638130|gb|ACU19379.1| unknown [Glycine max]
          Length = 257

 Score =  255 bits (651), Expect = 6e-66
 Identities = 120/134 (89%), Positives = 129/134 (96%)
 Frame = -1

Query: 403 KEGVAFSQCTECRAVFLLRANVPPERWWLRLKFQFLVARDHAFIFVIVQLVVAFLGILVY 224
           KEG AFS CTECRAVF+LRANVPP+RWWLRLKFQFLVARDHAFIF+IVQLVVAFLG+LVY
Sbjct: 106 KEGFAFSHCTECRAVFILRANVPPDRWWLRLKFQFLVARDHAFIFIIVQLVVAFLGVLVY 165

Query: 223 KFYGEELKDMFGYEEHPYAFYTMAVLAIVLVGLLYGFFIAIICGQRISERHYHVLAKQEL 44
           KFYG+EL++MFGYEEHPY FYTMAVLAIVLVGLLYGFFIAIICGQRI+ERHYHVLAKQEL
Sbjct: 166 KFYGDELREMFGYEEHPYGFYTMAVLAIVLVGLLYGFFIAIICGQRINERHYHVLAKQEL 225

Query: 43  TKEYIVEDREANKN 2
           TKEY+VEDRE  KN
Sbjct: 226 TKEYVVEDREHVKN 239


>ref|XP_004144419.1| PREDICTED: E3 ubiquitin-protein ligase MARCH1-like [Cucumis
           sativus] gi|449519260|ref|XP_004166653.1| PREDICTED: E3
           ubiquitin-protein ligase MARCH1-like [Cucumis sativus]
          Length = 261

 Score =  254 bits (650), Expect = 7e-66
 Identities = 118/134 (88%), Positives = 129/134 (96%)
 Frame = -1

Query: 403 KEGVAFSQCTECRAVFLLRANVPPERWWLRLKFQFLVARDHAFIFVIVQLVVAFLGILVY 224
           KEG AF+ CTECRA+F+LRANVPP+RWWLRLKFQFLVARDHAFIF+IVQL+VAFLG+LVY
Sbjct: 110 KEGFAFAHCTECRAMFVLRANVPPDRWWLRLKFQFLVARDHAFIFIIVQLIVAFLGVLVY 169

Query: 223 KFYGEELKDMFGYEEHPYAFYTMAVLAIVLVGLLYGFFIAIICGQRISERHYHVLAKQEL 44
           KFYGEEL++MFGYEEHPY FY MAVLAI+LVGLLYGFFIAIICGQRI+ERHYHVLAKQEL
Sbjct: 170 KFYGEELREMFGYEEHPYGFYAMAVLAIILVGLLYGFFIAIICGQRINERHYHVLAKQEL 229

Query: 43  TKEYIVEDREANKN 2
           TKEYIVEDRE NKN
Sbjct: 230 TKEYIVEDREHNKN 243


>ref|XP_002268835.1| PREDICTED: E3 ubiquitin-protein ligase MARCH1 [Vitis vinifera]
           gi|297735744|emb|CBI18431.3| unnamed protein product
           [Vitis vinifera]
          Length = 258

 Score =  254 bits (648), Expect = 1e-65
 Identities = 118/134 (88%), Positives = 129/134 (96%)
 Frame = -1

Query: 403 KEGVAFSQCTECRAVFLLRANVPPERWWLRLKFQFLVARDHAFIFVIVQLVVAFLGILVY 224
           KEG AF+ CTECRAVF+LRANVPP+RWWLRLKFQ LVARDHAFIFVIVQL+VAFLG+LVY
Sbjct: 107 KEGFAFAHCTECRAVFILRANVPPDRWWLRLKFQLLVARDHAFIFVIVQLIVAFLGVLVY 166

Query: 223 KFYGEELKDMFGYEEHPYAFYTMAVLAIVLVGLLYGFFIAIICGQRISERHYHVLAKQEL 44
           KFYGEEL++MFGY+EHPY FYTMAVLAIVLVGLLYGFFIAIICGQRI+ERHYHVLAKQEL
Sbjct: 167 KFYGEELREMFGYDEHPYGFYTMAVLAIVLVGLLYGFFIAIICGQRINERHYHVLAKQEL 226

Query: 43  TKEYIVEDREANKN 2
           TKEY+VEDRE NK+
Sbjct: 227 TKEYVVEDREVNKD 240


>ref|XP_002315373.1| predicted protein [Populus trichocarpa] gi|222864413|gb|EEF01544.1|
           predicted protein [Populus trichocarpa]
          Length = 259

 Score =  252 bits (643), Expect = 5e-65
 Identities = 117/134 (87%), Positives = 130/134 (97%)
 Frame = -1

Query: 403 KEGVAFSQCTECRAVFLLRANVPPERWWLRLKFQFLVARDHAFIFVIVQLVVAFLGILVY 224
           KEG AF+ CTECRA+F+LRANVP +RWWLRLKFQFLVARDHAFIFV+VQL+VAFLG+LVY
Sbjct: 108 KEGFAFAHCTECRAMFVLRANVPADRWWLRLKFQFLVARDHAFIFVVVQLIVAFLGVLVY 167

Query: 223 KFYGEELKDMFGYEEHPYAFYTMAVLAIVLVGLLYGFFIAIICGQRISERHYHVLAKQEL 44
           KFYGEEL++MFGYEEHPY FYTMAVLAIVLVGLLYGFFIAIICGQRI+ERHYHVLAKQEL
Sbjct: 168 KFYGEELREMFGYEEHPYGFYTMAVLAIVLVGLLYGFFIAIICGQRINERHYHVLAKQEL 227

Query: 43  TKEYIVEDREANKN 2
           TKEY+VEDREA+K+
Sbjct: 228 TKEYVVEDREASKD 241


>ref|XP_002513323.1| membrane associated ring finger 1,8, putative [Ricinus communis]
           gi|223547231|gb|EEF48726.1| membrane associated ring
           finger 1,8, putative [Ricinus communis]
          Length = 256

 Score =  251 bits (640), Expect = 1e-64
 Identities = 116/134 (86%), Positives = 128/134 (95%)
 Frame = -1

Query: 403 KEGVAFSQCTECRAVFLLRANVPPERWWLRLKFQFLVARDHAFIFVIVQLVVAFLGILVY 224
           KEG AF+ CTECRA F+LRANVPP+RWWLRLKFQFLVARDH FIFV+VQL+VAFLG+ VY
Sbjct: 105 KEGFAFAHCTECRASFILRANVPPDRWWLRLKFQFLVARDHVFIFVVVQLIVAFLGMFVY 164

Query: 223 KFYGEELKDMFGYEEHPYAFYTMAVLAIVLVGLLYGFFIAIICGQRISERHYHVLAKQEL 44
           KFYGEEL++MFGYEEHPY FYT+AVLAIVLVGLLYGFFIAIICGQRI+ERHYHVLAKQEL
Sbjct: 165 KFYGEELREMFGYEEHPYGFYTVAVLAIVLVGLLYGFFIAIICGQRINERHYHVLAKQEL 224

Query: 43  TKEYIVEDREANKN 2
           TKEY+VEDREA+KN
Sbjct: 225 TKEYVVEDREASKN 238


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