BLASTX nr result

ID: Panax21_contig00024073 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00024073
         (1222 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAK61816.1| conserved oligomeric Golgi complex component [Ci...   571   e-160
ref|XP_002308543.1| predicted protein [Populus trichocarpa] gi|2...   571   e-160
ref|XP_002516094.1| Conserved oligomeric Golgi complex component...   566   e-159
ref|XP_002873542.1| hypothetical protein ARALYDRAFT_488040 [Arab...   565   e-159
ref|XP_002279909.2| PREDICTED: conserved oligomeric Golgi comple...   564   e-158

>dbj|BAK61816.1| conserved oligomeric Golgi complex component [Citrus unshiu]
          Length = 568

 Score =  571 bits (1471), Expect = e-160
 Identities = 291/352 (82%), Positives = 308/352 (87%)
 Frame = -1

Query: 1057 MESESPTTTANEVNGVAAGFLPLASDSQQPYVSELLSFTLDRLHKEPELLRVDAERIQRQ 878
            ME+E   T  +  +   A  LPLAS SQQPYVSELLSFTLDRLHKEPELLRVDAERIQRQ
Sbjct: 1    METE---TGDDATSSSVASLLPLASLSQQPYVSELLSFTLDRLHKEPELLRVDAERIQRQ 57

Query: 877  MQEVAVANYRAFISAADALLSIREEVSSIDKHLESMIAEIPKLTSGCTEFIESAEQILEK 698
            MQEVAV NYRAFI+AADALL+IREEVSSIDKHL+S+I EIPKLTSGCTEFIESAE+ILEK
Sbjct: 58   MQEVAVGNYRAFIAAADALLAIREEVSSIDKHLDSLITEIPKLTSGCTEFIESAEEILEK 117

Query: 697  RKMNQXXXXXXXXXXXXLEIPQLMDTCVRNGNYDEALDLEAFVCKLSTMHPKLPVIQALA 518
            RKMNQ            LEIPQLMDTCVRNGNYDEALDLEA+VCKLST+HPKLP+IQALA
Sbjct: 118  RKMNQMLLANHSTLLDLLEIPQLMDTCVRNGNYDEALDLEAYVCKLSTLHPKLPIIQALA 177

Query: 517  EEVRGTTXXXXXXXXXXXXSNIQLPECLRIIGYLRRIGVFSEYEMRLQFLRCREAWLTGI 338
             EV+ TT            SNIQLPECLRIIGYLRRIGVFSEYEMRLQFLRCREAWLTGI
Sbjct: 178  AEVKQTTQSLLSQLLQKLRSNIQLPECLRIIGYLRRIGVFSEYEMRLQFLRCREAWLTGI 237

Query: 337  LDDLDQRNAYEYLKGMVNCHRMHLFDVVNQYRAIFADDTSGSEENYDGGLLFSWATHQIT 158
            L+DLDQ+NAYEYLKGM+NCHRMHLFDVVNQYRAIFADDTSGSEENYDGGLLFSWA HQIT
Sbjct: 238  LEDLDQKNAYEYLKGMINCHRMHLFDVVNQYRAIFADDTSGSEENYDGGLLFSWAMHQIT 297

Query: 157  SHLKMLKIMLPKITEGGSLSNILDQCMYCAMGLGWVGLDFRGLLPPLFEEAV 2
            +HLK LK+MLPKITEG SLSNILDQCMYCAMGLGWVGLDFRGLLPPLFEEAV
Sbjct: 298  AHLKTLKVMLPKITEGVSLSNILDQCMYCAMGLGWVGLDFRGLLPPLFEEAV 349


>ref|XP_002308543.1| predicted protein [Populus trichocarpa] gi|222854519|gb|EEE92066.1|
            predicted protein [Populus trichocarpa]
          Length = 575

 Score =  571 bits (1471), Expect = e-160
 Identities = 289/346 (83%), Positives = 301/346 (86%)
 Frame = -1

Query: 1039 TTTANEVNGVAAGFLPLASDSQQPYVSELLSFTLDRLHKEPELLRVDAERIQRQMQEVAV 860
            T    +++      LPLAS SQQPYVSELLSFTLDRLHKEPELLRVDAERIQRQMQEVAV
Sbjct: 4    TENGQDMSSAVTSLLPLASVSQQPYVSELLSFTLDRLHKEPELLRVDAERIQRQMQEVAV 63

Query: 859  ANYRAFISAADALLSIREEVSSIDKHLESMIAEIPKLTSGCTEFIESAEQILEKRKMNQX 680
             NYRAFI+AADALL+IR++VSSID HLES+I EIPKLTSGCTEFIESAE+ILEKRKMNQ 
Sbjct: 64   VNYRAFIAAADALLAIRQQVSSIDNHLESLITEIPKLTSGCTEFIESAEEILEKRKMNQT 123

Query: 679  XXXXXXXXXXXLEIPQLMDTCVRNGNYDEALDLEAFVCKLSTMHPKLPVIQALAEEVRGT 500
                       LEIPQLMDTCVRNGNYDEALDLEAFVCKLSTMHPKLPVIQALA EVR T
Sbjct: 124  LLANHSTLLDLLEIPQLMDTCVRNGNYDEALDLEAFVCKLSTMHPKLPVIQALAAEVRQT 183

Query: 499  TXXXXXXXXXXXXSNIQLPECLRIIGYLRRIGVFSEYEMRLQFLRCREAWLTGILDDLDQ 320
            T            SNIQLPECLRIIGYLRRIGVFSEYEMRLQFLRCREAWLTGIL+DLDQ
Sbjct: 184  TQSLLSQLLQKLRSNIQLPECLRIIGYLRRIGVFSEYEMRLQFLRCREAWLTGILEDLDQ 243

Query: 319  RNAYEYLKGMVNCHRMHLFDVVNQYRAIFADDTSGSEENYDGGLLFSWATHQITSHLKML 140
            RNAYEYLKGM+NCHR HLFDVVNQYRAIFADDTSGSEENYDGGLLFSWA HQITSHLK L
Sbjct: 244  RNAYEYLKGMINCHRTHLFDVVNQYRAIFADDTSGSEENYDGGLLFSWAMHQITSHLKTL 303

Query: 139  KIMLPKITEGGSLSNILDQCMYCAMGLGWVGLDFRGLLPPLFEEAV 2
            KIMLPKITEGGSLSNILD CMYCA+GL WVGLDFRGLLPPLFEEAV
Sbjct: 304  KIMLPKITEGGSLSNILDSCMYCAVGLNWVGLDFRGLLPPLFEEAV 349


>ref|XP_002516094.1| Conserved oligomeric Golgi complex component, putative [Ricinus
            communis] gi|223544580|gb|EEF46096.1| Conserved
            oligomeric Golgi complex component, putative [Ricinus
            communis]
          Length = 574

 Score =  566 bits (1458), Expect = e-159
 Identities = 288/335 (85%), Positives = 297/335 (88%)
 Frame = -1

Query: 1006 AGFLPLASDSQQPYVSELLSFTLDRLHKEPELLRVDAERIQRQMQEVAVANYRAFISAAD 827
            A  +PLAS SQQPYVSELLSFTLDRLHKEPELLRVDAERIQRQMQEVAV NYRAFI+AAD
Sbjct: 13   ANLIPLASVSQQPYVSELLSFTLDRLHKEPELLRVDAERIQRQMQEVAVGNYRAFIAAAD 72

Query: 826  ALLSIREEVSSIDKHLESMIAEIPKLTSGCTEFIESAEQILEKRKMNQXXXXXXXXXXXX 647
            ALL+IR+EVSSID HLES+I EIPKLTSGCTEFIESAEQILE+RKMNQ            
Sbjct: 73   ALLAIRQEVSSIDNHLESLITEIPKLTSGCTEFIESAEQILEERKMNQTLLANHSTLLDL 132

Query: 646  LEIPQLMDTCVRNGNYDEALDLEAFVCKLSTMHPKLPVIQALAEEVRGTTXXXXXXXXXX 467
            LEIPQLMDTCVRNGNYDEALDLEAFVCKL TMHPKLPVIQALA EVR TT          
Sbjct: 133  LEIPQLMDTCVRNGNYDEALDLEAFVCKLLTMHPKLPVIQALAAEVRQTTQSLLSQLLQK 192

Query: 466  XXSNIQLPECLRIIGYLRRIGVFSEYEMRLQFLRCREAWLTGILDDLDQRNAYEYLKGMV 287
              SNIQLPECLRIIGYLRRIGVFSEYEMRLQFLRCREAWLTGIL+DLDQRN YEYLKGM+
Sbjct: 193  LRSNIQLPECLRIIGYLRRIGVFSEYEMRLQFLRCREAWLTGILEDLDQRNVYEYLKGMI 252

Query: 286  NCHRMHLFDVVNQYRAIFADDTSGSEENYDGGLLFSWATHQITSHLKMLKIMLPKITEGG 107
            NCHRMHLFDVVNQYRAIFADDTSGSEENYDGGLLFSWA HQIT+HLK LKIMLPKITEGG
Sbjct: 253  NCHRMHLFDVVNQYRAIFADDTSGSEENYDGGLLFSWAMHQITAHLKTLKIMLPKITEGG 312

Query: 106  SLSNILDQCMYCAMGLGWVGLDFRGLLPPLFEEAV 2
            SLSNILDQCMYCAMGL WVGLDFRGLLP LFEEAV
Sbjct: 313  SLSNILDQCMYCAMGLCWVGLDFRGLLPSLFEEAV 347


>ref|XP_002873542.1| hypothetical protein ARALYDRAFT_488040 [Arabidopsis lyrata subsp.
            lyrata] gi|297319379|gb|EFH49801.1| hypothetical protein
            ARALYDRAFT_488040 [Arabidopsis lyrata subsp. lyrata]
          Length = 568

 Score =  565 bits (1456), Expect = e-159
 Identities = 286/335 (85%), Positives = 298/335 (88%)
 Frame = -1

Query: 1006 AGFLPLASDSQQPYVSELLSFTLDRLHKEPELLRVDAERIQRQMQEVAVANYRAFISAAD 827
            A  L LAS +QQPYVSELLSFTLDRLHKEPELLRVDAERIQRQMQEVAV NYRAFI+AAD
Sbjct: 15   ASLLSLASATQQPYVSELLSFTLDRLHKEPELLRVDAERIQRQMQEVAVGNYRAFITAAD 74

Query: 826  ALLSIREEVSSIDKHLESMIAEIPKLTSGCTEFIESAEQILEKRKMNQXXXXXXXXXXXX 647
            ALL+IR+EVSSIDKHLES+I E+PKLTSGCTEFI+SAE ILEKRKMNQ            
Sbjct: 75   ALLAIRQEVSSIDKHLESLIGEVPKLTSGCTEFIDSAENILEKRKMNQSLLANHSTLLDL 134

Query: 646  LEIPQLMDTCVRNGNYDEALDLEAFVCKLSTMHPKLPVIQALAEEVRGTTXXXXXXXXXX 467
            LEIPQLMDTCVRNGN+DEALDLEAFV KL+TMHPKLPVIQALA EVR TT          
Sbjct: 135  LEIPQLMDTCVRNGNFDEALDLEAFVSKLATMHPKLPVIQALAAEVRQTTQSLLSQLLQK 194

Query: 466  XXSNIQLPECLRIIGYLRRIGVFSEYEMRLQFLRCREAWLTGILDDLDQRNAYEYLKGMV 287
              SNIQLPECLRIIGYLRRIGVF EYEMRLQFLRCREAWLTGIL+DLDQ+NAYEYLKGM+
Sbjct: 195  LRSNIQLPECLRIIGYLRRIGVFGEYEMRLQFLRCREAWLTGILEDLDQKNAYEYLKGMI 254

Query: 286  NCHRMHLFDVVNQYRAIFADDTSGSEENYDGGLLFSWATHQITSHLKMLKIMLPKITEGG 107
            NCHRMHLFDVVNQYRAIFADDTSGSEENYDGGLLFSWA HQITSHLK LKIMLPKITEGG
Sbjct: 255  NCHRMHLFDVVNQYRAIFADDTSGSEENYDGGLLFSWAMHQITSHLKTLKIMLPKITEGG 314

Query: 106  SLSNILDQCMYCAMGLGWVGLDFRGLLPPLFEEAV 2
            SLSNILDQCMYCAMGLGWVGLDFRGLLPPLFEEAV
Sbjct: 315  SLSNILDQCMYCAMGLGWVGLDFRGLLPPLFEEAV 349


>ref|XP_002279909.2| PREDICTED: conserved oligomeric Golgi complex subunit 8-like [Vitis
            vinifera] gi|296081667|emb|CBI20672.3| unnamed protein
            product [Vitis vinifera]
          Length = 571

 Score =  564 bits (1453), Expect = e-158
 Identities = 290/343 (84%), Positives = 301/343 (87%)
 Frame = -1

Query: 1030 ANEVNGVAAGFLPLASDSQQPYVSELLSFTLDRLHKEPELLRVDAERIQRQMQEVAVANY 851
            A E +   A  LPLAS SQQPYVSELLSFTLDRLHKEPELLRVDAERI+RQMQEVAV NY
Sbjct: 5    AAEDSSPMATLLPLASVSQQPYVSELLSFTLDRLHKEPELLRVDAERIRRQMQEVAVNNY 64

Query: 850  RAFISAADALLSIREEVSSIDKHLESMIAEIPKLTSGCTEFIESAEQILEKRKMNQXXXX 671
            RAFISAADALL+IREEVSS+DKHLES+I EIPKLTSGCTEFIESAEQILE+RKMNQ    
Sbjct: 65   RAFISAADALLAIREEVSSVDKHLESLINEIPKLTSGCTEFIESAEQILEERKMNQTLLA 124

Query: 670  XXXXXXXXLEIPQLMDTCVRNGNYDEALDLEAFVCKLSTMHPKLPVIQALAEEVRGTTXX 491
                    LEIPQLMDTCVRNGNYDEALDLEAFVCKLSTMHPKLPVIQALA EVR TT  
Sbjct: 125  NHSTLLDLLEIPQLMDTCVRNGNYDEALDLEAFVCKLSTMHPKLPVIQALAAEVRQTTQS 184

Query: 490  XXXXXXXXXXSNIQLPECLRIIGYLRRIGVFSEYEMRLQFLRCREAWLTGILDDLDQRNA 311
                      SNI LP+CLRIIGYLRRIGVFSE+EMRLQFLRCREAWLTGILDDLDQ+NA
Sbjct: 185  LLHQLLQKLRSNILLPDCLRIIGYLRRIGVFSEFEMRLQFLRCREAWLTGILDDLDQKNA 244

Query: 310  YEYLKGMVNCHRMHLFDVVNQYRAIFADDTSGSEENYDGGLLFSWATHQITSHLKMLKIM 131
            Y+YLKGMVNC RMHLFDVVNQYRAIFADDTSGSEENYDGGLLFSWA HQITSHL+ LK M
Sbjct: 245  YDYLKGMVNCQRMHLFDVVNQYRAIFADDTSGSEENYDGGLLFSWAMHQITSHLRTLKAM 304

Query: 130  LPKITEGGSLSNILDQCMYCAMGLGWVGLDFRGLLPPLFEEAV 2
            LPKITEGGSLSNILDQCMYCAMGLGWVGLDFRGLLP LFEEAV
Sbjct: 305  LPKITEGGSLSNILDQCMYCAMGLGWVGLDFRGLLPSLFEEAV 347


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