BLASTX nr result

ID: Panax21_contig00024070 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00024070
         (373 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274465.2| PREDICTED: uncharacterized protein LOC100250...    74   1e-11
emb|CAN60165.1| hypothetical protein VITISV_040087 [Vitis vinifera]    74   1e-11
emb|CBI27269.3| unnamed protein product [Vitis vinifera]               71   1e-10
ref|XP_002316094.1| predicted protein [Populus trichocarpa] gi|2...    65   4e-09
ref|XP_003522999.1| PREDICTED: uncharacterized protein LOC100793...    65   8e-09

>ref|XP_002274465.2| PREDICTED: uncharacterized protein LOC100250913 [Vitis vinifera]
          Length = 550

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 48/136 (35%), Positives = 68/136 (50%), Gaps = 14/136 (10%)
 Frame = +3

Query: 6   VSDFNDTEFETSAPISWVXXXXXXXXXXXXAVMCSSDFPEHFEFNFAGNMLVRFEDTYSS 185
           VS  +D  FE SAP+S              A   SS  PE+FE       + +FED YSS
Sbjct: 67  VSVLDDKGFEISAPLS--CNGSSEEDGRSVAAAYSSLSPEYFESYLPRRTVAQFEDIYSS 124

Query: 186 LLNSSPRKEVPVGPDYQADIPVWDPEVIK-------------QNSRSSTYGGDAD-DNGE 323
           LL+ SPR++VPVGPD+QA++PVW  + +K              +S+S       D +N E
Sbjct: 125 LLDCSPRRQVPVGPDHQANVPVWSLQKVKNRLDKLETSNRYISSSQSMVSDQTVDGENEE 184

Query: 324 EMKGACAMPVADLDFS 371
              G C +P+ + + S
Sbjct: 185 RWMGTCVIPMPEENLS 200


>emb|CAN60165.1| hypothetical protein VITISV_040087 [Vitis vinifera]
          Length = 605

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 48/136 (35%), Positives = 68/136 (50%), Gaps = 14/136 (10%)
 Frame = +3

Query: 6   VSDFNDTEFETSAPISWVXXXXXXXXXXXXAVMCSSDFPEHFEFNFAGNMLVRFEDTYSS 185
           VS  +D  FE SAP+S              A   SS  PE+FE       + +FED YSS
Sbjct: 122 VSVLDDKGFEISAPLS--CNGSSEEDGRSVAAAYSSLSPEYFESYLPRRTVAQFEDIYSS 179

Query: 186 LLNSSPRKEVPVGPDYQADIPVWDPEVIK-------------QNSRSSTYGGDAD-DNGE 323
           LL+ SPR++VPVGPD+QA++PVW  + +K              +S+S       D +N E
Sbjct: 180 LLDCSPRRQVPVGPDHQANVPVWSLQKVKNRLDKLETSNRYISSSQSMVSDQTVDGENEE 239

Query: 324 EMKGACAMPVADLDFS 371
              G C +P+ + + S
Sbjct: 240 RWMGTCVIPMPEENLS 255


>emb|CBI27269.3| unnamed protein product [Vitis vinifera]
          Length = 554

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 39/89 (43%), Positives = 52/89 (58%)
 Frame = +3

Query: 6   VSDFNDTEFETSAPISWVXXXXXXXXXXXXAVMCSSDFPEHFEFNFAGNMLVRFEDTYSS 185
           VS  +D  FE SAP+S              A   SS  PE+FE       + +FED YSS
Sbjct: 159 VSVLDDKGFEISAPLS--CNGSSEEDGRSVAAAYSSLSPEYFESYLPRRTVAQFEDIYSS 216

Query: 186 LLNSSPRKEVPVGPDYQADIPVWDPEVIK 272
           LL+ SPR++VPVGPD+QA++PVW  + +K
Sbjct: 217 LLDCSPRRQVPVGPDHQANVPVWSLQKVK 245


>ref|XP_002316094.1| predicted protein [Populus trichocarpa] gi|222865134|gb|EEF02265.1|
           predicted protein [Populus trichocarpa]
          Length = 489

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 33/92 (35%), Positives = 52/92 (56%), Gaps = 10/92 (10%)
 Frame = +3

Query: 120 PEHFEFNFAGNMLVRFEDTYSSLLNSSPRKEVPVGPDYQADIPVWDPEVIKQ------NS 281
           PE+F+F F   M +  +D +S  L+  PRK+VP+GP++QA IP+WD  + K       N 
Sbjct: 105 PEYFQFEFPRKMSMPLKDAHSFYLDDFPRKQVPLGPNHQASIPLWDNHIKKDKLVQFFNP 164

Query: 282 RSSTYGGD----ADDNGEEMKGACAMPVADLD 365
            SS+         +DN E++ G C +P+ D +
Sbjct: 165 NSSSLSESDHHIYNDNEEKLMGTCIIPMPDTE 196


>ref|XP_003522999.1| PREDICTED: uncharacterized protein LOC100793553 [Glycine max]
          Length = 522

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 35/92 (38%), Positives = 46/92 (50%), Gaps = 7/92 (7%)
 Frame = +3

Query: 117 FPEHFEFNFAGNMLVRFEDTYSSLLNSSPRKEVPVGPDYQADIPVWD-------PEVIKQ 275
           FPE+F        L R+ED YS LL  SPRK V VG D+QAD+P WD       P     
Sbjct: 114 FPEYFSPERPIRTLTRYEDIYSILLEHSPRKPVSVGSDHQADVPAWDILGATNRPNASDA 173

Query: 276 NSRSSTYGGDADDNGEEMKGACAMPVADLDFS 371
            S S    G  D+  + + G C +P+  ++ S
Sbjct: 174 VSVSDFTVGHIDETEKRLMGTCVIPMPQMELS 205


Top