BLASTX nr result
ID: Panax21_contig00024065
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00024065 (656 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002278861.2| PREDICTED: uncharacterized protein LOC100250... 107 2e-21 emb|CBI33920.3| unnamed protein product [Vitis vinifera] 107 2e-21 emb|CAN76782.1| hypothetical protein VITISV_013474 [Vitis vinifera] 107 2e-21 ref|XP_002532972.1| RNA-binding protein, putative [Ricinus commu... 100 2e-19 ref|XP_002337704.1| predicted protein [Populus trichocarpa] gi|2... 91 2e-16 >ref|XP_002278861.2| PREDICTED: uncharacterized protein LOC100250662 [Vitis vinifera] Length = 1105 Score = 107 bits (267), Expect = 2e-21 Identities = 52/62 (83%), Positives = 55/62 (88%), Gaps = 1/62 (1%) Frame = +1 Query: 370 RDSAFKRGIMDSMPFPPGVGG-RSAADGNSNVQSYEVITAEKAIDESNVGNRMLRSMGWQ 546 RDSAFK+G +DSMPFPPGVGG R D N NVQSYEVITA+KAIDESNVGNRMLRSMGWQ Sbjct: 984 RDSAFKKGSLDSMPFPPGVGGGRGMGDANGNVQSYEVITADKAIDESNVGNRMLRSMGWQ 1043 Query: 547 EG 552 EG Sbjct: 1044 EG 1045 >emb|CBI33920.3| unnamed protein product [Vitis vinifera] Length = 1029 Score = 107 bits (267), Expect = 2e-21 Identities = 52/62 (83%), Positives = 55/62 (88%), Gaps = 1/62 (1%) Frame = +1 Query: 370 RDSAFKRGIMDSMPFPPGVGG-RSAADGNSNVQSYEVITAEKAIDESNVGNRMLRSMGWQ 546 RDSAFK+G +DSMPFPPGVGG R D N NVQSYEVITA+KAIDESNVGNRMLRSMGWQ Sbjct: 908 RDSAFKKGSLDSMPFPPGVGGGRGMGDANGNVQSYEVITADKAIDESNVGNRMLRSMGWQ 967 Query: 547 EG 552 EG Sbjct: 968 EG 969 >emb|CAN76782.1| hypothetical protein VITISV_013474 [Vitis vinifera] Length = 1070 Score = 107 bits (267), Expect = 2e-21 Identities = 52/62 (83%), Positives = 55/62 (88%), Gaps = 1/62 (1%) Frame = +1 Query: 370 RDSAFKRGIMDSMPFPPGVGG-RSAADGNSNVQSYEVITAEKAIDESNVGNRMLRSMGWQ 546 RDSAFK+G +DSMPFPPGVGG R D N NVQSYEVITA+KAIDESNVGNRMLRSMGWQ Sbjct: 949 RDSAFKKGSLDSMPFPPGVGGGRGMGDANGNVQSYEVITADKAIDESNVGNRMLRSMGWQ 1008 Query: 547 EG 552 EG Sbjct: 1009 EG 1010 >ref|XP_002532972.1| RNA-binding protein, putative [Ricinus communis] gi|223527250|gb|EEF29409.1| RNA-binding protein, putative [Ricinus communis] Length = 962 Score = 100 bits (250), Expect = 2e-19 Identities = 49/64 (76%), Positives = 54/64 (84%), Gaps = 1/64 (1%) Frame = +1 Query: 367 DRDSAFKRGIMDSMPFPPGVGG-RSAADGNSNVQSYEVITAEKAIDESNVGNRMLRSMGW 543 +RD FK+G +DSMPFPPGVGG R A D + N QSYEVITA+KAIDESNVGNRMLRSMGW Sbjct: 837 NRDLPFKKGSLDSMPFPPGVGGGRGAGDASINTQSYEVITADKAIDESNVGNRMLRSMGW 896 Query: 544 QEGL 555 EGL Sbjct: 897 HEGL 900 >ref|XP_002337704.1| predicted protein [Populus trichocarpa] gi|222869578|gb|EEF06709.1| predicted protein [Populus trichocarpa] Length = 163 Score = 90.5 bits (223), Expect = 2e-16 Identities = 44/61 (72%), Positives = 50/61 (81%) Frame = +1 Query: 370 RDSAFKRGIMDSMPFPPGVGGRSAADGNSNVQSYEVITAEKAIDESNVGNRMLRSMGWQE 549 R+SAFKR +DSMPFPPGVGG G + QSYEVITA+KA+ ESNVGNRMLR+MGWQE Sbjct: 86 RESAFKRSALDSMPFPPGVGG---GRGIGDAQSYEVITADKALGESNVGNRMLRNMGWQE 142 Query: 550 G 552 G Sbjct: 143 G 143