BLASTX nr result

ID: Panax21_contig00024065 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00024065
         (656 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278861.2| PREDICTED: uncharacterized protein LOC100250...   107   2e-21
emb|CBI33920.3| unnamed protein product [Vitis vinifera]              107   2e-21
emb|CAN76782.1| hypothetical protein VITISV_013474 [Vitis vinifera]   107   2e-21
ref|XP_002532972.1| RNA-binding protein, putative [Ricinus commu...   100   2e-19
ref|XP_002337704.1| predicted protein [Populus trichocarpa] gi|2...    91   2e-16

>ref|XP_002278861.2| PREDICTED: uncharacterized protein LOC100250662 [Vitis vinifera]
          Length = 1105

 Score =  107 bits (267), Expect = 2e-21
 Identities = 52/62 (83%), Positives = 55/62 (88%), Gaps = 1/62 (1%)
 Frame = +1

Query: 370  RDSAFKRGIMDSMPFPPGVGG-RSAADGNSNVQSYEVITAEKAIDESNVGNRMLRSMGWQ 546
            RDSAFK+G +DSMPFPPGVGG R   D N NVQSYEVITA+KAIDESNVGNRMLRSMGWQ
Sbjct: 984  RDSAFKKGSLDSMPFPPGVGGGRGMGDANGNVQSYEVITADKAIDESNVGNRMLRSMGWQ 1043

Query: 547  EG 552
            EG
Sbjct: 1044 EG 1045


>emb|CBI33920.3| unnamed protein product [Vitis vinifera]
          Length = 1029

 Score =  107 bits (267), Expect = 2e-21
 Identities = 52/62 (83%), Positives = 55/62 (88%), Gaps = 1/62 (1%)
 Frame = +1

Query: 370  RDSAFKRGIMDSMPFPPGVGG-RSAADGNSNVQSYEVITAEKAIDESNVGNRMLRSMGWQ 546
            RDSAFK+G +DSMPFPPGVGG R   D N NVQSYEVITA+KAIDESNVGNRMLRSMGWQ
Sbjct: 908  RDSAFKKGSLDSMPFPPGVGGGRGMGDANGNVQSYEVITADKAIDESNVGNRMLRSMGWQ 967

Query: 547  EG 552
            EG
Sbjct: 968  EG 969


>emb|CAN76782.1| hypothetical protein VITISV_013474 [Vitis vinifera]
          Length = 1070

 Score =  107 bits (267), Expect = 2e-21
 Identities = 52/62 (83%), Positives = 55/62 (88%), Gaps = 1/62 (1%)
 Frame = +1

Query: 370  RDSAFKRGIMDSMPFPPGVGG-RSAADGNSNVQSYEVITAEKAIDESNVGNRMLRSMGWQ 546
            RDSAFK+G +DSMPFPPGVGG R   D N NVQSYEVITA+KAIDESNVGNRMLRSMGWQ
Sbjct: 949  RDSAFKKGSLDSMPFPPGVGGGRGMGDANGNVQSYEVITADKAIDESNVGNRMLRSMGWQ 1008

Query: 547  EG 552
            EG
Sbjct: 1009 EG 1010


>ref|XP_002532972.1| RNA-binding protein, putative [Ricinus communis]
            gi|223527250|gb|EEF29409.1| RNA-binding protein, putative
            [Ricinus communis]
          Length = 962

 Score =  100 bits (250), Expect = 2e-19
 Identities = 49/64 (76%), Positives = 54/64 (84%), Gaps = 1/64 (1%)
 Frame = +1

Query: 367  DRDSAFKRGIMDSMPFPPGVGG-RSAADGNSNVQSYEVITAEKAIDESNVGNRMLRSMGW 543
            +RD  FK+G +DSMPFPPGVGG R A D + N QSYEVITA+KAIDESNVGNRMLRSMGW
Sbjct: 837  NRDLPFKKGSLDSMPFPPGVGGGRGAGDASINTQSYEVITADKAIDESNVGNRMLRSMGW 896

Query: 544  QEGL 555
             EGL
Sbjct: 897  HEGL 900


>ref|XP_002337704.1| predicted protein [Populus trichocarpa] gi|222869578|gb|EEF06709.1|
           predicted protein [Populus trichocarpa]
          Length = 163

 Score = 90.5 bits (223), Expect = 2e-16
 Identities = 44/61 (72%), Positives = 50/61 (81%)
 Frame = +1

Query: 370 RDSAFKRGIMDSMPFPPGVGGRSAADGNSNVQSYEVITAEKAIDESNVGNRMLRSMGWQE 549
           R+SAFKR  +DSMPFPPGVGG     G  + QSYEVITA+KA+ ESNVGNRMLR+MGWQE
Sbjct: 86  RESAFKRSALDSMPFPPGVGG---GRGIGDAQSYEVITADKALGESNVGNRMLRNMGWQE 142

Query: 550 G 552
           G
Sbjct: 143 G 143


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