BLASTX nr result

ID: Panax21_contig00024062 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00024062
         (723 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526768.1| TRANSPARENT TESTA 1 protein, putative [Ricin...   342   5e-92
ref|XP_002314032.1| predicted protein [Populus trichocarpa] gi|2...   338   5e-91
ref|XP_003539640.1| PREDICTED: protein TRANSPARENT TESTA 1-like ...   337   1e-90
ref|XP_003627702.1| Zinc finger-like protein [Medicago truncatul...   336   3e-90
ref|XP_002298437.1| predicted protein [Populus trichocarpa] gi|2...   336   3e-90

>ref|XP_002526768.1| TRANSPARENT TESTA 1 protein, putative [Ricinus communis]
           gi|223533895|gb|EEF35622.1| TRANSPARENT TESTA 1 protein,
           putative [Ricinus communis]
          Length = 329

 Score =  342 bits (877), Expect = 5e-92
 Identities = 157/224 (70%), Positives = 173/224 (77%), Gaps = 2/224 (0%)
 Frame = -1

Query: 711 PSPNSDLVHPIEETMDKELSVNVLSG--LPLNKINKGQYWIPNPTQILIGPTQFSCPVCC 538
           PSP SDL   +   + +    N +SG  LP+ K++KGQ+WIP+P QILIGPTQFSCPVC 
Sbjct: 116 PSPTSDLGPRVSPPLIEVEEGNAVSGYPLPIQKLSKGQFWIPSPAQILIGPTQFSCPVCL 175

Query: 537 KNFXXXXXXXXXXXXXXXXXXXXXXXXXXXNRYNNLQMHMWGHGSQYRKGPDSLKGTQPT 358
           K F                           NRYNNLQMHMWGHGSQYRKGPDSL+GTQPT
Sbjct: 176 KTF---------------------------NRYNNLQMHMWGHGSQYRKGPDSLRGTQPT 208

Query: 357 AMLRLPCYCCAQGCKHNIDNPTSRPLKDFRTLQTHYKRKHGIKPFMCRKCGKAFAVKGDW 178
           AMLRLPCYCCA GCKHNID+P +RPLKDFRTLQTHYKRKHGIKPFMCRKCGK+FAVKGDW
Sbjct: 209 AMLRLPCYCCAPGCKHNIDHPRARPLKDFRTLQTHYKRKHGIKPFMCRKCGKSFAVKGDW 268

Query: 177 RTHEKNCGKIWFCFCGSDFKHKRSLKDHIKAFGHGHGAFGINCL 46
           RTHEKNCGK+W+C CGSDFKHKRSLKDHIKAFGHGH A GI+CL
Sbjct: 269 RTHEKNCGKVWYCVCGSDFKHKRSLKDHIKAFGHGHAALGIDCL 312


>ref|XP_002314032.1| predicted protein [Populus trichocarpa] gi|222850440|gb|EEE87987.1|
           predicted protein [Populus trichocarpa]
          Length = 277

 Score =  338 bits (868), Expect = 5e-91
 Identities = 158/226 (69%), Positives = 173/226 (76%), Gaps = 5/226 (2%)
 Frame = -1

Query: 711 PSPNSDL-----VHPIEETMDKELSVNVLSGLPLNKINKGQYWIPNPTQILIGPTQFSCP 547
           P+P+SDL     V P     DKE  ++ +SG PL K+NK QYWIP P+QILIGP+QFSCP
Sbjct: 68  PNPSSDLQTVLRVSPSANGPDKE-EISAVSGYPLEKLNKDQYWIPTPSQILIGPSQFSCP 126

Query: 546 VCCKNFXXXXXXXXXXXXXXXXXXXXXXXXXXXNRYNNLQMHMWGHGSQYRKGPDSLKGT 367
           +C K F                           NRYNNLQMHMWGHGSQYRKGPDSL+GT
Sbjct: 127 LCFKTF---------------------------NRYNNLQMHMWGHGSQYRKGPDSLRGT 159

Query: 366 QPTAMLRLPCYCCAQGCKHNIDNPTSRPLKDFRTLQTHYKRKHGIKPFMCRKCGKAFAVK 187
           QPT MLRL CYC AQGCKHNID+P +RPLKDFRTLQTHYKRKHGIKPFMCRKCGK+FAVK
Sbjct: 160 QPTGMLRLRCYCYAQGCKHNIDHPRARPLKDFRTLQTHYKRKHGIKPFMCRKCGKSFAVK 219

Query: 186 GDWRTHEKNCGKIWFCFCGSDFKHKRSLKDHIKAFGHGHGAFGINC 49
           GDWRTHEKNCGKIW+C CGSDFKHKRSLKDHIKAFGHGH AFGI+C
Sbjct: 220 GDWRTHEKNCGKIWYCICGSDFKHKRSLKDHIKAFGHGHAAFGIDC 265


>ref|XP_003539640.1| PREDICTED: protein TRANSPARENT TESTA 1-like [Glycine max]
          Length = 352

 Score =  337 bits (864), Expect = 1e-90
 Identities = 156/211 (73%), Positives = 169/211 (80%), Gaps = 1/211 (0%)
 Frame = -1

Query: 675 ETMDKELSVNVLSGLPL-NKINKGQYWIPNPTQILIGPTQFSCPVCCKNFXXXXXXXXXX 499
           E  +KE  VN++S  PL N++NKGQYWIP P+QILIGPTQF CPVC K F          
Sbjct: 152 EISEKE-EVNMISKHPLDNRLNKGQYWIPTPSQILIGPTQFPCPVCSKTF---------- 200

Query: 498 XXXXXXXXXXXXXXXXXNRYNNLQMHMWGHGSQYRKGPDSLKGTQPTAMLRLPCYCCAQG 319
                            NRYNNLQMHMWGHGSQYRKGPDSLKGTQPTAMLRLPC+CCA G
Sbjct: 201 -----------------NRYNNLQMHMWGHGSQYRKGPDSLKGTQPTAMLRLPCFCCAPG 243

Query: 318 CKHNIDNPTSRPLKDFRTLQTHYKRKHGIKPFMCRKCGKAFAVKGDWRTHEKNCGKIWFC 139
           CKHNID+P +RPLKDFRTLQTHYKRKHGIKP+MCRKCGKAFAVKGDWRTHEKNCGKIW+C
Sbjct: 244 CKHNIDHPRARPLKDFRTLQTHYKRKHGIKPYMCRKCGKAFAVKGDWRTHEKNCGKIWYC 303

Query: 138 FCGSDFKHKRSLKDHIKAFGHGHGAFGINCL 46
            CGSDFKHKRSLKDHIKAFG GHG+FGI+CL
Sbjct: 304 LCGSDFKHKRSLKDHIKAFGFGHGSFGIDCL 334


>ref|XP_003627702.1| Zinc finger-like protein [Medicago truncatula]
           gi|355521724|gb|AET02178.1| Zinc finger-like protein
           [Medicago truncatula]
          Length = 340

 Score =  336 bits (862), Expect = 3e-90
 Identities = 157/212 (74%), Positives = 172/212 (81%), Gaps = 2/212 (0%)
 Frame = -1

Query: 675 ETMDKELSVNVLSG-LPLNKIN-KGQYWIPNPTQILIGPTQFSCPVCCKNFXXXXXXXXX 502
           E  +KE  VN++S  LPL+K+N KGQYWIP P+QILIGPTQFSCPVC K F         
Sbjct: 139 EMAEKE-EVNMISEQLPLDKLNNKGQYWIPTPSQILIGPTQFSCPVCSKTF--------- 188

Query: 501 XXXXXXXXXXXXXXXXXXNRYNNLQMHMWGHGSQYRKGPDSLKGTQPTAMLRLPCYCCAQ 322
                             NRYNNLQMHMWGHGSQYRKGPDSLKG+QPTAMLRLPCYCCA 
Sbjct: 189 ------------------NRYNNLQMHMWGHGSQYRKGPDSLKGSQPTAMLRLPCYCCAP 230

Query: 321 GCKHNIDNPTSRPLKDFRTLQTHYKRKHGIKPFMCRKCGKAFAVKGDWRTHEKNCGKIWF 142
           GCKHNID+P ++PLKDFRTLQTHYKRKHGIKP+MCRKCGK+FAVKGDWRTHEKNCGKIW+
Sbjct: 231 GCKHNIDHPRAKPLKDFRTLQTHYKRKHGIKPYMCRKCGKSFAVKGDWRTHEKNCGKIWY 290

Query: 141 CFCGSDFKHKRSLKDHIKAFGHGHGAFGINCL 46
           C CGSDFKHKRSLKDHIKAFG+GHGAFGI+CL
Sbjct: 291 CLCGSDFKHKRSLKDHIKAFGYGHGAFGIDCL 322


>ref|XP_002298437.1| predicted protein [Populus trichocarpa] gi|222845695|gb|EEE83242.1|
           predicted protein [Populus trichocarpa]
          Length = 281

 Score =  336 bits (862), Expect = 3e-90
 Identities = 158/227 (69%), Positives = 173/227 (76%), Gaps = 6/227 (2%)
 Frame = -1

Query: 711 PSPNSDL------VHPIEETMDKELSVNVLSGLPLNKINKGQYWIPNPTQILIGPTQFSC 550
           P+P+SDL      V P     DK   ++ +SG PL K+NKGQYWIP P+QILIGP+QFSC
Sbjct: 68  PNPSSDLEIRALRVFPSPNAPDKG-EMSAVSGYPLEKLNKGQYWIPTPSQILIGPSQFSC 126

Query: 549 PVCCKNFXXXXXXXXXXXXXXXXXXXXXXXXXXXNRYNNLQMHMWGHGSQYRKGPDSLKG 370
           P+C K F                           NRYNNLQMHMWGHGSQYRKGPDSL+G
Sbjct: 127 PLCSKTF---------------------------NRYNNLQMHMWGHGSQYRKGPDSLRG 159

Query: 369 TQPTAMLRLPCYCCAQGCKHNIDNPTSRPLKDFRTLQTHYKRKHGIKPFMCRKCGKAFAV 190
           TQPTAMLRLPCYCCA GCKHNID+P++RPLKDFRTLQTHYKRKHGIKPFMCRKCGK FAV
Sbjct: 160 TQPTAMLRLPCYCCATGCKHNIDHPSARPLKDFRTLQTHYKRKHGIKPFMCRKCGKPFAV 219

Query: 189 KGDWRTHEKNCGKIWFCFCGSDFKHKRSLKDHIKAFGHGHGAFGINC 49
           KGDWRTHEKNCGKIW+C CGSDFKHKRSLKDHIKAFGHGH   GI+C
Sbjct: 220 KGDWRTHEKNCGKIWYCICGSDFKHKRSLKDHIKAFGHGH--VGIDC 264


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