BLASTX nr result

ID: Panax21_contig00024048 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00024048
         (984 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269823.1| PREDICTED: ycf20-like protein isoform 2 [Vit...   258   2e-66
ref|XP_002318844.1| predicted protein [Populus trichocarpa] gi|2...   231   2e-58
ref|XP_002510852.1| conserved hypothetical protein [Ricinus comm...   226   5e-57
ref|XP_003551354.1| PREDICTED: uncharacterized protein ycf20-lik...   225   1e-56
ref|XP_004143642.1| PREDICTED: uncharacterized protein ycf20-lik...   224   2e-56

>ref|XP_002269823.1| PREDICTED: ycf20-like protein isoform 2 [Vitis vinifera]
           gi|225469308|ref|XP_002269782.1| PREDICTED: ycf20-like
           protein isoform 1 [Vitis vinifera]
           gi|297741124|emb|CBI31855.3| unnamed protein product
           [Vitis vinifera]
          Length = 155

 Score =  258 bits (658), Expect = 2e-66
 Identities = 126/144 (87%), Positives = 138/144 (95%)
 Frame = +2

Query: 548 LLKFGVAPGTKVLHGKCAAPVSRSSPRLFSIRAVQENEGPRRLVDIIRLVPEISRNYFKS 727
           LLKFG+A GT+V HGKC+   SRSSPR FS++AVQENEGPRRLVDIIR+VP++SRNYF+S
Sbjct: 12  LLKFGLATGTRVSHGKCSMLASRSSPRFFSVQAVQENEGPRRLVDIIRIVPQLSRNYFQS 71

Query: 728 PSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVTRFYYSRPKVTFP 907
           PSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAV+CVL+TEYVTRFYYSRPKVTFP
Sbjct: 72  PSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVLCVLITEYVTRFYYSRPKVTFP 131

Query: 908 IALLNNFKMGFTYGLFIDAFKLAS 979
           +ALLNNFKMGFTYGLFIDAFKLAS
Sbjct: 132 LALLNNFKMGFTYGLFIDAFKLAS 155


>ref|XP_002318844.1| predicted protein [Populus trichocarpa] gi|222859517|gb|EEE97064.1|
           predicted protein [Populus trichocarpa]
          Length = 155

 Score =  231 bits (589), Expect = 2e-58
 Identities = 119/143 (83%), Positives = 124/143 (86%)
 Frame = +2

Query: 551 LKFGVAPGTKVLHGKCAAPVSRSSPRLFSIRAVQENEGPRRLVDIIRLVPEISRNYFKSP 730
           LK G AP  +V   K    V RSS     IRAVQENEGPRRL+DIIR +PE+SRNYF+ P
Sbjct: 13  LKLGFAPQRRVSSVKYGTSVFRSSTGRLRIRAVQENEGPRRLIDIIRTIPELSRNYFRRP 72

Query: 731 SRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVTRFYYSRPKVTFPI 910
           SRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVTRFYYSRPKVTFPI
Sbjct: 73  SRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVTRFYYSRPKVTFPI 132

Query: 911 ALLNNFKMGFTYGLFIDAFKLAS 979
           ALLNNFKMGFTYGLFIDAFKLAS
Sbjct: 133 ALLNNFKMGFTYGLFIDAFKLAS 155


>ref|XP_002510852.1| conserved hypothetical protein [Ricinus communis]
           gi|223549967|gb|EEF51454.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 155

 Score =  226 bits (577), Expect = 5e-57
 Identities = 117/143 (81%), Positives = 125/143 (87%)
 Frame = +2

Query: 551 LKFGVAPGTKVLHGKCAAPVSRSSPRLFSIRAVQENEGPRRLVDIIRLVPEISRNYFKSP 730
           LK G     +V  GK    +SRSS  L SI+AVQ+N GP+RLVDIIR VPE SRNYF+SP
Sbjct: 13  LKLGFGFQRRVSCGKYGMLISRSSRGLLSIQAVQDNGGPQRLVDIIRRVPEFSRNYFRSP 72

Query: 731 SRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVTRFYYSRPKVTFPI 910
           SRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAV+CVLLTEYVTRFYYSRPKVTFP+
Sbjct: 73  SRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVICVLLTEYVTRFYYSRPKVTFPV 132

Query: 911 ALLNNFKMGFTYGLFIDAFKLAS 979
           ALLNNFKMGFTYGLFIDAFKLAS
Sbjct: 133 ALLNNFKMGFTYGLFIDAFKLAS 155


>ref|XP_003551354.1| PREDICTED: uncharacterized protein ycf20-like [Glycine max]
          Length = 151

 Score =  225 bits (574), Expect = 1e-56
 Identities = 122/144 (84%), Positives = 128/144 (88%), Gaps = 1/144 (0%)
 Frame = +2

Query: 551 LKFGVAPGTKV-LHGKCAAPVSRSSPRLFSIRAVQENEGPRRLVDIIRLVPEISRNYFKS 727
           L FG  P TKV + G+    VSRSS  L  IRAVQEN GPRRLVDIIRLVPE SRNYF+S
Sbjct: 12  LSFGPLPKTKVSVSGRL---VSRSSAGL-RIRAVQENGGPRRLVDIIRLVPEFSRNYFRS 67

Query: 728 PSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVTRFYYSRPKVTFP 907
           PSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAV+CVLLTEYVT+FYYSRPKVTFP
Sbjct: 68  PSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVLCVLLTEYVTKFYYSRPKVTFP 127

Query: 908 IALLNNFKMGFTYGLFIDAFKLAS 979
           +ALLNNFKMGFTYGLFIDAFKLAS
Sbjct: 128 VALLNNFKMGFTYGLFIDAFKLAS 151


>ref|XP_004143642.1| PREDICTED: uncharacterized protein ycf20-like [Cucumis sativus]
           gi|449530953|ref|XP_004172456.1| PREDICTED:
           uncharacterized protein ycf20-like [Cucumis sativus]
          Length = 156

 Score =  224 bits (572), Expect = 2e-56
 Identities = 117/145 (80%), Positives = 125/145 (86%), Gaps = 1/145 (0%)
 Frame = +2

Query: 548 LLKFGVAPGTKVLHGKCAAPVSRSSP-RLFSIRAVQENEGPRRLVDIIRLVPEISRNYFK 724
           LL +G  P     + +     SR SP R F ++AVQ+  GPRRLVDIIRLVPE+SRNYF+
Sbjct: 12  LLNYGFTPKMNPSYWRYDMVKSRPSPPRSFRVKAVQDTGGPRRLVDIIRLVPELSRNYFR 71

Query: 725 SPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVTRFYYSRPKVTF 904
           SPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVTRFYYSRPKVTF
Sbjct: 72  SPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVTRFYYSRPKVTF 131

Query: 905 PIALLNNFKMGFTYGLFIDAFKLAS 979
           PIALLNNFKMGFTYGLFIDAFKLAS
Sbjct: 132 PIALLNNFKMGFTYGLFIDAFKLAS 156


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