BLASTX nr result

ID: Panax21_contig00024038 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00024038
         (918 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN69546.1| hypothetical protein VITISV_010819 [Vitis vinifera]   267   3e-69
ref|XP_002275490.1| PREDICTED: F-box protein At5g07670 [Vitis vi...   266   4e-69
ref|XP_002302516.1| predicted protein [Populus trichocarpa] gi|2...   258   1e-66
emb|CBI38670.3| unnamed protein product [Vitis vinifera]              248   1e-63
ref|XP_002263969.1| PREDICTED: F-box protein At5g07670 [Vitis vi...   248   1e-63

>emb|CAN69546.1| hypothetical protein VITISV_010819 [Vitis vinifera]
          Length = 376

 Score =  267 bits (682), Expect = 3e-69
 Identities = 135/204 (66%), Positives = 159/204 (77%)
 Frame = +2

Query: 305 DYTSLLSDQILCIILSKMPESQQIPNSLVCKRWEKLSGRLIHSLKLLDWEFLESGRLIYR 484
           D  SLLSDQ+L  ILSK+P S     SLVCKRW  L GRL+ S+KL+DW+FLESGRLI R
Sbjct: 56  DPFSLLSDQLLLHILSKLPYSHHTTTSLVCKRWMHLHGRLVQSVKLVDWDFLESGRLIRR 115

Query: 485 FPNLTDVDLVRACIKSPRNSGILLSHRFVLVHLNSGVSNDGFIRKHDLLDSGLIDQGIRV 664
           FPNLTD+DLVRAC++ P NS I LSH+F+ + L+S   + GF+   DLL   +ID+G+R+
Sbjct: 116 FPNLTDIDLVRACVRLPNNSAIWLSHKFLSIQLDSRFLSGGFVSGDDLLPPDVIDEGLRI 175

Query: 665 LAGGCLNLRKLVLIGVSEEGLTCVAEECKTLQELELHCCLDFVLKGISGCQNLQILKLIG 844
           +A GC NLRKLVLIG SE+GL+ VA EC TLQELELH C D  L+GISGCQNLQILKLIG
Sbjct: 176 VAEGCPNLRKLVLIGASEKGLSSVATECLTLQELELHXCTDLSLRGISGCQNLQILKLIG 235

Query: 845 CVDGFYDSVISDIGLTILAQGCRR 916
            V   Y+SVISDIGLTILAQGCRR
Sbjct: 236 SVRELYNSVISDIGLTILAQGCRR 259


>ref|XP_002275490.1| PREDICTED: F-box protein At5g07670 [Vitis vinifera]
          Length = 473

 Score =  266 bits (681), Expect = 4e-69
 Identities = 135/204 (66%), Positives = 159/204 (77%)
 Frame = +2

Query: 305 DYTSLLSDQILCIILSKMPESQQIPNSLVCKRWEKLSGRLIHSLKLLDWEFLESGRLIYR 484
           D  SLLSDQ+L  ILSK+P S     SLVCKRW  L GRL+ S+KL+DW+FLESGRLI R
Sbjct: 56  DPFSLLSDQLLLHILSKLPYSHHTTTSLVCKRWMHLHGRLVQSVKLVDWDFLESGRLICR 115

Query: 485 FPNLTDVDLVRACIKSPRNSGILLSHRFVLVHLNSGVSNDGFIRKHDLLDSGLIDQGIRV 664
           FPNLTD+DLVRAC++ P NS I LSH+F+ + L+S   + GF+   DLL   +ID+G+R+
Sbjct: 116 FPNLTDIDLVRACVRLPNNSAIWLSHKFLSIQLDSRFLSGGFVSGDDLLPPDVIDEGLRI 175

Query: 665 LAGGCLNLRKLVLIGVSEEGLTCVAEECKTLQELELHCCLDFVLKGISGCQNLQILKLIG 844
           +A GC NLRKLVLIG SE+GL+ VA EC TLQELELH C D  L+GISGCQNLQILKLIG
Sbjct: 176 VAEGCPNLRKLVLIGASEKGLSSVATECLTLQELELHYCTDLSLRGISGCQNLQILKLIG 235

Query: 845 CVDGFYDSVISDIGLTILAQGCRR 916
            V   Y+SVISDIGLTILAQGCRR
Sbjct: 236 SVRELYNSVISDIGLTILAQGCRR 259


>ref|XP_002302516.1| predicted protein [Populus trichocarpa] gi|222844242|gb|EEE81789.1|
           predicted protein [Populus trichocarpa]
          Length = 450

 Score =  258 bits (659), Expect = 1e-66
 Identities = 123/213 (57%), Positives = 166/213 (77%)
 Frame = +2

Query: 278 LEINVGSGPDYTSLLSDQILCIILSKMPESQQIPNSLVCKRWEKLSGRLIHSLKLLDWEF 457
           L  N  + PDYTSLLSD++L  + +K+P SQ + NSLVCKRW  L GRL+HS++++D+ F
Sbjct: 22  LPSNDPTRPDYTSLLSDELLLQVFNKVPISQYVSNSLVCKRWFFLHGRLVHSIRVIDFGF 81

Query: 458 LESGRLIYRFPNLTDVDLVRACIKSPRNSGILLSHRFVLVHLNSGVSNDGFIRKHDLLDS 637
           + SGR+  RFPNL ++D+V ACIK PRNSGIL++   + V++ + + + GFI ++DLL S
Sbjct: 82  VNSGRVFTRFPNLENIDIVHACIKMPRNSGILITRNNLSVYVGTKLLSGGFIEENDLLSS 141

Query: 638 GLIDQGIRVLAGGCLNLRKLVLIGVSEEGLTCVAEECKTLQELELHCCLDFVLKGISGCQ 817
            LID G+++++    NLR++V+ G SE GL  V+ +C+ LQELELHCC D  LKGISGC+
Sbjct: 142 DLIDNGLQLISKSYPNLRRIVVFGTSENGLLSVSSKCEMLQELELHCCGDMSLKGISGCR 201

Query: 818 NLQILKLIGCVDGFYDSVISDIGLTILAQGCRR 916
           NLQ+LKLIGCVDGFY+SV+SDIGLTILAQGCRR
Sbjct: 202 NLQVLKLIGCVDGFYNSVVSDIGLTILAQGCRR 234


>emb|CBI38670.3| unnamed protein product [Vitis vinifera]
          Length = 512

 Score =  248 bits (634), Expect = 1e-63
 Identities = 125/204 (61%), Positives = 154/204 (75%)
 Frame = +2

Query: 305 DYTSLLSDQILCIILSKMPESQQIPNSLVCKRWEKLSGRLIHSLKLLDWEFLESGRLIYR 484
           D T LLSD++L  +  K+PESQ+ PNSLVCKRW  L GRL+ S+KLL+W+FLESGRL+ R
Sbjct: 61  DRTLLLSDELLLRVFQKLPESQRKPNSLVCKRWLSLQGRLVQSVKLLEWDFLESGRLVSR 120

Query: 485 FPNLTDVDLVRACIKSPRNSGILLSHRFVLVHLNSGVSNDGFIRKHDLLDSGLIDQGIRV 664
           FPNLT VDLV ACI  PR+ G+LL+HR V V ++S VS +GF+    +L S ++D+G+R 
Sbjct: 121 FPNLTRVDLVHACIVWPRSCGVLLNHRVVSVPVDSEVSQNGFLENGKVLASNVVDRGLRF 180

Query: 665 LAGGCLNLRKLVLIGVSEEGLTCVAEECKTLQELELHCCLDFVLKGISGCQNLQILKLIG 844
           LA G  NLRKL ++G SE GL  VAEEC TLQELELH C D  L+ ISG  NLQILKLIG
Sbjct: 181 LASGYPNLRKLAVVGASELGLLSVAEECSTLQELELHKCSDATLRAISGFGNLQILKLIG 240

Query: 845 CVDGFYDSVISDIGLTILAQGCRR 916
             +G Y S++SD+GLTILAQGC R
Sbjct: 241 NAEGLYKSLVSDVGLTILAQGCTR 264


>ref|XP_002263969.1| PREDICTED: F-box protein At5g07670 [Vitis vinifera]
          Length = 478

 Score =  248 bits (634), Expect = 1e-63
 Identities = 125/204 (61%), Positives = 154/204 (75%)
 Frame = +2

Query: 305 DYTSLLSDQILCIILSKMPESQQIPNSLVCKRWEKLSGRLIHSLKLLDWEFLESGRLIYR 484
           D T LLSD++L  +  K+PESQ+ PNSLVCKRW  L GRL+ S+KLL+W+FLESGRL+ R
Sbjct: 61  DRTLLLSDELLLRVFQKLPESQRKPNSLVCKRWLSLQGRLVQSVKLLEWDFLESGRLVSR 120

Query: 485 FPNLTDVDLVRACIKSPRNSGILLSHRFVLVHLNSGVSNDGFIRKHDLLDSGLIDQGIRV 664
           FPNLT VDLV ACI  PR+ G+LL+HR V V ++S VS +GF+    +L S ++D+G+R 
Sbjct: 121 FPNLTRVDLVHACIVWPRSCGVLLNHRVVSVPVDSEVSQNGFLENGKVLASNVVDRGLRF 180

Query: 665 LAGGCLNLRKLVLIGVSEEGLTCVAEECKTLQELELHCCLDFVLKGISGCQNLQILKLIG 844
           LA G  NLRKL ++G SE GL  VAEEC TLQELELH C D  L+ ISG  NLQILKLIG
Sbjct: 181 LASGYPNLRKLAVVGASELGLLSVAEECSTLQELELHKCSDATLRAISGFGNLQILKLIG 240

Query: 845 CVDGFYDSVISDIGLTILAQGCRR 916
             +G Y S++SD+GLTILAQGC R
Sbjct: 241 NAEGLYKSLVSDVGLTILAQGCTR 264


Top