BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00024037
         (882 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263449.1| PREDICTED: ribosome-recycling factor [Vitis ...   241   2e-61
emb|CAN68423.1| hypothetical protein VITISV_018268 [Vitis vinifera]   241   2e-61
dbj|BAD44436.1| putative ribosome recycling factor [Arabidopsis ...   239   8e-61
ref|NP_186829.3| ribosome recycling factor [Arabidopsis thaliana...   239   8e-61
ref|XP_002509550.1| ribosome recycling factor, putative [Ricinus...   229   8e-58

>ref|XP_002263449.1| PREDICTED: ribosome-recycling factor [Vitis vinifera]
           gi|296090242|emb|CBI40061.3| unnamed protein product
           [Vitis vinifera]
          Length = 258

 Score =  241 bits (615), Expect = 2e-61
 Identities = 137/229 (59%), Positives = 163/229 (71%), Gaps = 1/229 (0%)
 Frame = -2

Query: 695 TSSINFLFEIRRGFSKKRNTQSIDDYDDGSTVESV-DIGATVKTTALSQMEAAIDSLSRE 519
           +S+++FL E RRGF+K R ++   D D G+TVE V DIG  VK  A+SQM+AA+ +LSRE
Sbjct: 42  SSALDFLRESRRGFAKGRKSK---DSDAGNTVEVVPDIGPAVKENAMSQMDAAVVALSRE 98

Query: 518 LMKLQTGRASIGMLDHIIVETRGVKMPLNGMAAVSVLDPKTLSITPYDSDAVKELEKAIV 339
           L KL+TGRAS GMLDHIIVET GVKMPL+ +A VSVLDPKTLS+TPYD DA+K+LE AIV
Sbjct: 99  LSKLRTGRASAGMLDHIIVETGGVKMPLSRLAVVSVLDPKTLSVTPYDLDALKQLENAIV 158

Query: 338 SSPLGLNPKVEGYRLIVAIPRLTKEHVQAVCKLVTKSSEDVKQSIRRARQKALXXXXXXX 159
           SSPLGLNPK +G RLI  IP LTKEH+QA+CK+V KS EDVKQSIRRARQKAL       
Sbjct: 159 SSPLGLNPKADGERLIAVIPPLTKEHIQAMCKVVAKSCEDVKQSIRRARQKALDMIKKAG 218

Query: 158 XXXXXXXXXXXXISTDDAXXXXXXXXXXXXKYIKSAEEMCKAKEKEITE 12
                          D+             K++KSAE+MCKAKEKEI E
Sbjct: 219 SSLPKDVAKRLEKEVDE----------LTKKFVKSAEDMCKAKEKEIAE 257


>emb|CAN68423.1| hypothetical protein VITISV_018268 [Vitis vinifera]
          Length = 258

 Score =  241 bits (615), Expect = 2e-61
 Identities = 138/229 (60%), Positives = 164/229 (71%), Gaps = 1/229 (0%)
 Frame = -2

Query: 695 TSSINFLFEIRRGFSKKRNTQSIDDYDDGSTVESV-DIGATVKTTALSQMEAAIDSLSRE 519
           +S+++FL E RRGF+K R ++   D D G+TVE V DIG  VK  A+SQM+AA+ +LSRE
Sbjct: 42  SSALDFLRESRRGFAKGRKSK---DSDAGNTVEVVPDIGPAVKENAMSQMDAAVVALSRE 98

Query: 518 LMKLQTGRASIGMLDHIIVETRGVKMPLNGMAAVSVLDPKTLSITPYDSDAVKELEKAIV 339
           L KL+TGRAS GMLDHIIVET GVKMPL+ +A VSVLDPKTLS+TPYD DA+K+LE AIV
Sbjct: 99  LSKLRTGRASAGMLDHIIVETGGVKMPLSRLAVVSVLDPKTLSVTPYDLDALKQLENAIV 158

Query: 338 SSPLGLNPKVEGYRLIVAIPRLTKEHVQAVCKLVTKSSEDVKQSIRRARQKALXXXXXXX 159
           SSPLGLNPK +G RLI  IP LTKEH+QA+CK+V KS EDVKQSIRRARQKAL       
Sbjct: 159 SSPLGLNPKADGERLIAVIPPLTKEHIQAMCKVVAKSCEDVKQSIRRARQKALDXIKKAG 218

Query: 158 XXXXXXXXXXXXISTDDAXXXXXXXXXXXXKYIKSAEEMCKAKEKEITE 12
                          D+             K++KSAE+MCKAKEKEI E
Sbjct: 219 SSLPKDVAKRLEKEVDE----------LTKKFVKSAEDMCKAKEKEIAE 257


>dbj|BAD44436.1| putative ribosome recycling factor [Arabidopsis thaliana]
          Length = 267

 Score =  239 bits (609), Expect = 8e-61
 Identities = 132/225 (58%), Positives = 160/225 (71%)
 Frame = -2

Query: 683 NFLFEIRRGFSKKRNTQSIDDYDDGSTVESVDIGATVKTTALSQMEAAIDSLSRELMKLQ 504
           +FL + RRGF+K + ++  DD   G    + DIG TVK  A SQMEAAID+LSR+L KL+
Sbjct: 55  DFLRDSRRGFAKGKKSK--DDSGTGMVDAAPDIGPTVKAAASSQMEAAIDALSRDLTKLR 112

Query: 503 TGRASIGMLDHIIVETRGVKMPLNGMAAVSVLDPKTLSITPYDSDAVKELEKAIVSSPLG 324
           TGRA+ GMLDHI+VET GVKMPLN +A VSVLDPKTLS+ PYD D VKELEKAIV+SPLG
Sbjct: 113 TGRAAPGMLDHIVVETGGVKMPLNHLALVSVLDPKTLSVNPYDPDTVKELEKAIVASPLG 172

Query: 323 LNPKVEGYRLIVAIPRLTKEHVQAVCKLVTKSSEDVKQSIRRARQKALXXXXXXXXXXXX 144
           LNPK++G RL+ +IP LTKEH+QA+CK+VTKSSE VKQSIRRARQKAL            
Sbjct: 173 LNPKLDGQRLVASIPALTKEHIQAMCKIVTKSSEVVKQSIRRARQKALDTIKKAGSSLPK 232

Query: 143 XXXXXXXISTDDAXXXXXXXXXXXXKYIKSAEEMCKAKEKEITES 9
                     D+             K++KSAE+MCK+KEKEITE+
Sbjct: 233 DEVKRLEKEVDE----------LTKKFVKSAEDMCKSKEKEITEA 267


>ref|NP_186829.3| ribosome recycling factor [Arabidopsis thaliana]
           gi|34146850|gb|AAQ62433.1| At3g01800 [Arabidopsis
           thaliana] gi|51970776|dbj|BAD44080.1| putative ribosome
           recycling factor [Arabidopsis thaliana]
           gi|62319213|dbj|BAD94407.1| putative ribosome recycling
           factor [Arabidopsis thaliana]
           gi|332640195|gb|AEE73716.1| ribosome recycling factor
           [Arabidopsis thaliana]
          Length = 267

 Score =  239 bits (609), Expect = 8e-61
 Identities = 132/225 (58%), Positives = 160/225 (71%)
 Frame = -2

Query: 683 NFLFEIRRGFSKKRNTQSIDDYDDGSTVESVDIGATVKTTALSQMEAAIDSLSRELMKLQ 504
           +FL + RRGF+K + ++  DD   G    + DIG TVK  A SQMEAAID+LSR+L KL+
Sbjct: 55  DFLRDSRRGFAKGKKSK--DDSGTGMVDAAPDIGPTVKAAASSQMEAAIDALSRDLTKLR 112

Query: 503 TGRASIGMLDHIIVETRGVKMPLNGMAAVSVLDPKTLSITPYDSDAVKELEKAIVSSPLG 324
           TGRA+ GMLDHI+VET GVKMPLN +A VSVLDPKTLS+ PYD D VKELEKAIV+SPLG
Sbjct: 113 TGRAAPGMLDHIVVETGGVKMPLNHLALVSVLDPKTLSVNPYDPDTVKELEKAIVASPLG 172

Query: 323 LNPKVEGYRLIVAIPRLTKEHVQAVCKLVTKSSEDVKQSIRRARQKALXXXXXXXXXXXX 144
           LNPK++G RL+ +IP LTKEH+QA+CK+VTKSSE VKQSIRRARQKAL            
Sbjct: 173 LNPKLDGQRLVASIPALTKEHIQAMCKIVTKSSEVVKQSIRRARQKALDTIKKAGSSLPK 232

Query: 143 XXXXXXXISTDDAXXXXXXXXXXXXKYIKSAEEMCKAKEKEITES 9
                     D+             K++KSAE+MCK+KEKEITE+
Sbjct: 233 DEVKRLEKEVDE----------LTKKFVKSAEDMCKSKEKEITEA 267


>ref|XP_002509550.1| ribosome recycling factor, putative [Ricinus communis]
           gi|223549449|gb|EEF50937.1| ribosome recycling factor,
           putative [Ricinus communis]
          Length = 262

 Score =  229 bits (583), Expect = 8e-58
 Identities = 129/223 (57%), Positives = 156/223 (69%)
 Frame = -2

Query: 683 NFLFEIRRGFSKKRNTQSIDDYDDGSTVESVDIGATVKTTALSQMEAAIDSLSRELMKLQ 504
           NFL + RRGF+K + ++  DD   G+   + DIG  VK +A  QMEAAI SLSREL KL+
Sbjct: 50  NFLIDSRRGFAKGKKSK--DDSGGGTVQVTPDIGPAVKESAALQMEAAIVSLSRELTKLR 107

Query: 503 TGRASIGMLDHIIVETRGVKMPLNGMAAVSVLDPKTLSITPYDSDAVKELEKAIVSSPLG 324
           TGRAS GMLDHIIVET GVKMPLN +A V+V+DPKTLS+ PYD + V  LEKAIVSSPLG
Sbjct: 108 TGRASAGMLDHIIVETDGVKMPLNRLAVVAVMDPKTLSVNPYDPNMVSALEKAIVSSPLG 167

Query: 323 LNPKVEGYRLIVAIPRLTKEHVQAVCKLVTKSSEDVKQSIRRARQKALXXXXXXXXXXXX 144
           LNP+V+G RLI +IP LTKEH+QA+CK+V KS E+VKQS+RRARQKAL            
Sbjct: 168 LNPRVDGERLIASIPPLTKEHMQAMCKVVGKSCEEVKQSVRRARQKAL----------DT 217

Query: 143 XXXXXXXISTDDAXXXXXXXXXXXXKYIKSAEEMCKAKEKEIT 15
                  +S DD             K++KSAE++CKAKEKEIT
Sbjct: 218 IKKAGSNLSKDDVKRLEKEVDELTKKFVKSAEDICKAKEKEIT 260