BLASTX nr result

ID: Panax21_contig00024015 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00024015
         (557 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002309119.1| predicted protein [Populus trichocarpa] gi|2...   163   1e-38
gb|ABK96465.1| unknown [Populus trichocarpa x Populus deltoides]      163   1e-38
emb|CBI30424.3| unnamed protein product [Vitis vinifera]              156   2e-36
ref|XP_002274014.1| PREDICTED: uncharacterized protein LOC100242...   152   4e-35
ref|XP_002533892.1| conserved hypothetical protein [Ricinus comm...   148   5e-34

>ref|XP_002309119.1| predicted protein [Populus trichocarpa] gi|222855095|gb|EEE92642.1|
           predicted protein [Populus trichocarpa]
          Length = 255

 Score =  163 bits (413), Expect(2) = 1e-38
 Identities = 84/110 (76%), Positives = 92/110 (83%), Gaps = 1/110 (0%)
 Frame = +1

Query: 100 MISLKCIQSSFTPTKHVLFQKRGFAK-RNSILFLCKSNESDSEAPPPEGDTKKQELLARI 276
           M SLK I +SF PT H  F  R  +  +NSILFLCKSN+SDSEAPPPEGDTKKQELLA+I
Sbjct: 1   MFSLKAINTSFAPTNHGFFHTRKPSNTKNSILFLCKSNDSDSEAPPPEGDTKKQELLAKI 60

Query: 277 AMLQTQKVRLTDYLDERSSYLTQFAEEANAEFDQIGENALKELDETSARV 426
           AMLQ QKVRLTDYLDERS YLTQFAEEANAEFD+IGE+ALK LDE  AR+
Sbjct: 61  AMLQAQKVRLTDYLDERSDYLTQFAEEANAEFDKIGEDALKGLDEAGARI 110



 Score = 21.9 bits (45), Expect(2) = 1e-38
 Identities = 9/11 (81%), Positives = 11/11 (100%)
 Frame = +2

Query: 524 QIMENIESRMQ 556
           +IMENIES+MQ
Sbjct: 109 RIMENIESQMQ 119


>gb|ABK96465.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 255

 Score =  163 bits (413), Expect = 1e-38
 Identities = 84/110 (76%), Positives = 92/110 (83%), Gaps = 1/110 (0%)
 Frame = +1

Query: 100 MISLKCIQSSFTPTKHVLFQKRGFAK-RNSILFLCKSNESDSEAPPPEGDTKKQELLARI 276
           M SLK I +SF PT H  F  R  +  +NSILFLCKSN+SDSEAPPPEGDTKKQELLA+I
Sbjct: 1   MFSLKAINTSFAPTNHGFFHTRKPSNTKNSILFLCKSNDSDSEAPPPEGDTKKQELLAKI 60

Query: 277 AMLQTQKVRLTDYLDERSSYLTQFAEEANAEFDQIGENALKELDETSARV 426
           AMLQ QKVRLTDYLDERS YLTQFAEEANAEFD+IGE+ALK LDE  AR+
Sbjct: 61  AMLQAQKVRLTDYLDERSDYLTQFAEEANAEFDKIGEDALKGLDEAGARI 110


>emb|CBI30424.3| unnamed protein product [Vitis vinifera]
          Length = 1454

 Score =  156 bits (394), Expect = 2e-36
 Identities = 84/124 (67%), Positives = 96/124 (77%), Gaps = 3/124 (2%)
 Frame = +1

Query: 64   ISPLYLYK*KRKMISLKCIQSSFTPTKHVLFQKRGFAKRNSILFLCKSNESDS---EAPP 234
            I+  Y YK   KMI+LK  Q+SFT TK+VLF  R   K+ S L LCKSN+ DS   +   
Sbjct: 1188 IAKWYTYK---KMIALKATQTSFTSTKYVLFHTRRLPKKRSTLSLCKSNDDDSSPSDGSL 1244

Query: 235  PEGDTKKQELLARIAMLQTQKVRLTDYLDERSSYLTQFAEEANAEFDQIGENALKELDET 414
            PEGD++KQELLARIAMLQ QKVRLTDYLDERS+YLTQFAEEANAEFDQIGENALKEL+E 
Sbjct: 1245 PEGDSRKQELLARIAMLQAQKVRLTDYLDERSAYLTQFAEEANAEFDQIGENALKELEEA 1304

Query: 415  SARV 426
              R+
Sbjct: 1305 GTRI 1308


>ref|XP_002274014.1| PREDICTED: uncharacterized protein LOC100242508 [Vitis vinifera]
          Length = 258

 Score =  152 bits (383), Expect = 4e-35
 Identities = 79/112 (70%), Positives = 90/112 (80%), Gaps = 3/112 (2%)
 Frame = +1

Query: 100 MISLKCIQSSFTPTKHVLFQKRGFAKRNSILFLCKSNESDS---EAPPPEGDTKKQELLA 270
           MI+LK  Q+SFT TK+VLF  R   K+ S L LCKSN+ DS   +   PEGD++KQELLA
Sbjct: 1   MIALKATQTSFTSTKYVLFHTRRLPKKRSTLSLCKSNDDDSSPSDGSLPEGDSRKQELLA 60

Query: 271 RIAMLQTQKVRLTDYLDERSSYLTQFAEEANAEFDQIGENALKELDETSARV 426
           RIAMLQ QKVRLTDYLDERS+YLTQFAEEANAEFDQIGENALKEL+E   R+
Sbjct: 61  RIAMLQAQKVRLTDYLDERSAYLTQFAEEANAEFDQIGENALKELEEAGTRI 112


>ref|XP_002533892.1| conserved hypothetical protein [Ricinus communis]
           gi|223526156|gb|EEF28492.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 261

 Score =  148 bits (374), Expect = 5e-34
 Identities = 79/118 (66%), Positives = 93/118 (78%), Gaps = 9/118 (7%)
 Frame = +1

Query: 100 MISLKCIQSSFTPTKHVLFQ-KRGFAKRNSILFLCKSNE--------SDSEAPPPEGDTK 252
           MI+LK I +SFTPTKH LF  +R   ++N+I  LCK N         SDSEA PPEGDT+
Sbjct: 1   MIALKAIHTSFTPTKHALFHTRRPTNQKNTIWCLCKPNNNNSDSNSNSDSEASPPEGDTR 60

Query: 253 KQELLARIAMLQTQKVRLTDYLDERSSYLTQFAEEANAEFDQIGENALKELDETSARV 426
           KQELLARIAMLQT+KVRLTDY+DERSSYL+QF EEA+AEFD+IGE+ALK LDE  AR+
Sbjct: 61  KQELLARIAMLQTEKVRLTDYIDERSSYLSQFTEEASAEFDKIGEDALKGLDEAGARI 118


Top