BLASTX nr result
ID: Panax21_contig00024014
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00024014 (466 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004160161.1| PREDICTED: RING finger protein 150-like [Cuc... 93 3e-17 ref|XP_002309999.1| predicted protein [Populus trichocarpa] gi|2... 92 4e-17 ref|XP_002306334.1| predicted protein [Populus trichocarpa] gi|2... 87 1e-15 ref|XP_003602018.1| RING finger family protein [Medicago truncat... 85 5e-15 ref|XP_002310001.1| predicted protein [Populus trichocarpa] gi|2... 82 5e-14 >ref|XP_004160161.1| PREDICTED: RING finger protein 150-like [Cucumis sativus] Length = 208 Score = 92.8 bits (229), Expect = 3e-17 Identities = 51/108 (47%), Positives = 63/108 (58%), Gaps = 1/108 (0%) Frame = -2 Query: 330 MSALSQFFSHXXXXXXXXXXXXXXXXXXFVRSITGHIFPTGNGPITTAQYLKLIERKNPA 151 M ALS+FFSH +R+I G + ITTAQ+ KLIE KNP Sbjct: 1 MGALSEFFSHLHTMTAVFFTLLLLEFVILIRTIFGLRPNSDKRVITTAQFFKLIEDKNPT 60 Query: 150 NRFKAGLKEE-SKECSVCLSTFEEGEEIRKLKQCKHTFHKDCLDTWLR 10 RF + + +C+VCLS FEEGE++RKL QC HTFHKDCLD WL+ Sbjct: 61 IRFSNKVTPSIADQCAVCLSEFEEGEKVRKL-QCNHTFHKDCLDNWLK 107 >ref|XP_002309999.1| predicted protein [Populus trichocarpa] gi|222852902|gb|EEE90449.1| predicted protein [Populus trichocarpa] Length = 163 Score = 92.0 bits (227), Expect = 4e-17 Identities = 48/110 (43%), Positives = 63/110 (57%), Gaps = 2/110 (1%) Frame = -2 Query: 330 MSALSQFFSHXXXXXXXXXXXXXXXXXXFVRSITGHIFPTGNGPITTAQYLKLIERKNPA 151 M++LS+FFSH +S+ G + I+T QYLK +E KNP Sbjct: 1 MASLSEFFSHLYTMSIVFLSLLLVEIVILFQSVIGSTLKSNKPIISTTQYLKHMEEKNPT 60 Query: 150 NRFKAGL--KEESKECSVCLSTFEEGEEIRKLKQCKHTFHKDCLDTWLRQ 7 + L +++S EC+VCLS F EGE +RKL CKHTFHKDCLD WL+Q Sbjct: 61 ISYSEKLTRQQDSMECAVCLSKFSEGESVRKLN-CKHTFHKDCLDKWLQQ 109 >ref|XP_002306334.1| predicted protein [Populus trichocarpa] gi|222855783|gb|EEE93330.1| predicted protein [Populus trichocarpa] Length = 149 Score = 87.4 bits (215), Expect = 1e-15 Identities = 43/81 (53%), Positives = 55/81 (67%), Gaps = 2/81 (2%) Frame = -2 Query: 243 VRSITGHIFPTGNGPITTAQYLKLIERKNPANRFKAGL--KEESKECSVCLSTFEEGEEI 70 +RS+ G + I+T QYL+ IE KNP + L +++S EC+VCLS F EGE + Sbjct: 17 IRSVIGSTLKSDKPIISTTQYLRHIEEKNPTISYSKQLMRQQDSIECAVCLSEFSEGESV 76 Query: 69 RKLKQCKHTFHKDCLDTWLRQ 7 RKLK CKHTFHKDCLD WL+Q Sbjct: 77 RKLK-CKHTFHKDCLDEWLQQ 96 >ref|XP_003602018.1| RING finger family protein [Medicago truncatula] gi|355491066|gb|AES72269.1| RING finger family protein [Medicago truncatula] Length = 157 Score = 85.1 bits (209), Expect = 5e-15 Identities = 40/63 (63%), Positives = 47/63 (74%) Frame = -2 Query: 198 ITTAQYLKLIERKNPANRFKAGLKEESKECSVCLSTFEEGEEIRKLKQCKHTFHKDCLDT 19 ITT QY+K IE KNP R+ L +CSVCLS FEEGE++R+LK CKHTFHKDCLD Sbjct: 41 ITTRQYIKFIEEKNPTIRYNKKLNSHG-DCSVCLSEFEEGEKVRRLK-CKHTFHKDCLDK 98 Query: 18 WLR 10 WL+ Sbjct: 99 WLQ 101 >ref|XP_002310001.1| predicted protein [Populus trichocarpa] gi|222852904|gb|EEE90451.1| predicted protein [Populus trichocarpa] Length = 164 Score = 82.0 bits (201), Expect = 5e-14 Identities = 39/65 (60%), Positives = 46/65 (70%), Gaps = 1/65 (1%) Frame = -2 Query: 198 ITTAQYLKLIERKNPANRFKAGLKE-ESKECSVCLSTFEEGEEIRKLKQCKHTFHKDCLD 22 I T QY L+E KNP + L+ ES+EC+VCLS F EGE +RKLK CKHTFHKDCLD Sbjct: 48 IITTQYFNLVEEKNPTICYSENLRHHESRECAVCLSEFLEGESLRKLK-CKHTFHKDCLD 106 Query: 21 TWLRQ 7 WL + Sbjct: 107 KWLEE 111