BLASTX nr result
ID: Panax21_contig00024005
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00024005 (351 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002267100.2| PREDICTED: zinc finger CCCH domain-containin... 162 3e-38 emb|CBI17411.3| unnamed protein product [Vitis vinifera] 162 3e-38 ref|XP_002533810.1| nuclear receptor binding set domain containi... 143 2e-32 emb|CBI37995.3| unnamed protein product [Vitis vinifera] 139 2e-31 ref|XP_002306135.1| predicted protein [Populus trichocarpa] gi|2... 139 2e-31 >ref|XP_002267100.2| PREDICTED: zinc finger CCCH domain-containing protein 44-like [Vitis vinifera] Length = 1643 Score = 162 bits (410), Expect = 3e-38 Identities = 82/118 (69%), Positives = 96/118 (81%), Gaps = 2/118 (1%) Frame = -2 Query: 350 MKNGDTSVMSQFDVQALLLDYIKRNNLRDPRNKSHILCDLKLKTLFGKQRVGHFEMLKLL 171 MKNGDTSV+SQFDVQALLL+YIKRNNLRDPR KS I+CD++L+ LFGK RVGHFEMLKLL Sbjct: 350 MKNGDTSVLSQFDVQALLLEYIKRNNLRDPRRKSQIICDMRLRNLFGKARVGHFEMLKLL 409 Query: 170 EFHFVVKEDPPKDVFIQGGVVDINAIQVLADENNNN--LMANDKKRKTRKKGEEHVPQ 3 E HF++KE D ++GGVVD A QV ADENN+ ++ DKKRKTRKKG+E PQ Sbjct: 410 ESHFLIKEHSRADDIMRGGVVDTLASQVDADENNDYQLMIIKDKKRKTRKKGDERGPQ 467 >emb|CBI17411.3| unnamed protein product [Vitis vinifera] Length = 1362 Score = 162 bits (410), Expect = 3e-38 Identities = 82/118 (69%), Positives = 96/118 (81%), Gaps = 2/118 (1%) Frame = -2 Query: 350 MKNGDTSVMSQFDVQALLLDYIKRNNLRDPRNKSHILCDLKLKTLFGKQRVGHFEMLKLL 171 MKNGDTSV+SQFDVQALLL+YIKRNNLRDPR KS I+CD++L+ LFGK RVGHFEMLKLL Sbjct: 350 MKNGDTSVLSQFDVQALLLEYIKRNNLRDPRRKSQIICDMRLRNLFGKARVGHFEMLKLL 409 Query: 170 EFHFVVKEDPPKDVFIQGGVVDINAIQVLADENNNN--LMANDKKRKTRKKGEEHVPQ 3 E HF++KE D ++GGVVD A QV ADENN+ ++ DKKRKTRKKG+E PQ Sbjct: 410 ESHFLIKEHSRADDIMRGGVVDTLASQVDADENNDYQLMIIKDKKRKTRKKGDERGPQ 467 >ref|XP_002533810.1| nuclear receptor binding set domain containing protein 1, nsd, putative [Ricinus communis] gi|223526264|gb|EEF28579.1| nuclear receptor binding set domain containing protein 1, nsd, putative [Ricinus communis] Length = 1586 Score = 143 bits (360), Expect = 2e-32 Identities = 68/117 (58%), Positives = 89/117 (76%), Gaps = 2/117 (1%) Frame = -2 Query: 350 MKNGDTSVMSQFDVQALLLDYIKRNNLRDPRNKSHILCDLKLKTLFGKQRVGHFEMLKLL 171 M+NGDTS++SQFDVQALLLDYIKRNNLRDPR KS I+CD +LK LFGK R GHFEMLKLL Sbjct: 378 MRNGDTSMLSQFDVQALLLDYIKRNNLRDPRQKSQIICDSRLKNLFGKPRAGHFEMLKLL 437 Query: 170 EFHFVVKEDPPKDVFIQGGVVDI--NAIQVLADENNNNLMANDKKRKTRKKGEEHVP 6 E+HF++KE P + ++ GV D + ++ ++ +M ND++R+TRKK +E P Sbjct: 438 EYHFLIKEKSPANDSVRVGVADAVGSLLEAAGSSDSQMIMGNDRRRRTRKKMDERGP 494 >emb|CBI37995.3| unnamed protein product [Vitis vinifera] Length = 868 Score = 139 bits (350), Expect = 2e-31 Identities = 75/118 (63%), Positives = 86/118 (72%), Gaps = 2/118 (1%) Frame = -2 Query: 350 MKNGDTSVMSQFDVQALLLDYIKRNNLRDPRNKSHILCDLKLKTLFGKQRVGHFEMLKLL 171 MKNGD SV SQFDVQALLL+YIKRN LRDPR KS I+CD +L+ LFGK RVGHFEMLKLL Sbjct: 356 MKNGDKSVTSQFDVQALLLEYIKRNKLRDPRRKSQIICDSRLEYLFGKPRVGHFEMLKLL 415 Query: 170 EFHFVVKEDPPKDVFIQGGVVDINAIQVLADENNNNLM--ANDKKRKTRKKGEEHVPQ 3 E HF+ KED D +QG VVD A Q+ D N + LM D++RK RKKG+E Q Sbjct: 416 ESHFLNKEDSQTD-DLQGSVVDSEASQLEVDGNTDTLMKVGKDRRRKARKKGDERGSQ 472 >ref|XP_002306135.1| predicted protein [Populus trichocarpa] gi|222849099|gb|EEE86646.1| predicted protein [Populus trichocarpa] Length = 393 Score = 139 bits (350), Expect = 2e-31 Identities = 73/113 (64%), Positives = 87/113 (76%), Gaps = 2/113 (1%) Frame = -2 Query: 350 MKNGDTSVMSQFDVQALLLDYIKRNNLRDPRNKSHILCDLKLKTLFGKQRVGHFEMLKLL 171 MKNGD S SQFDVQALLLDYIKRN LRDPR KS I+CD +L+ LFGK RVGHFEMLKLL Sbjct: 169 MKNGDKSACSQFDVQALLLDYIKRNKLRDPRRKSQIICDSRLENLFGKPRVGHFEMLKLL 228 Query: 170 EFHFVVKEDPPKDVFIQGGVVDINAIQVLADENNNNL--MANDKKRKTRKKGE 18 E HF++K+D D +QG VVD + Q+ AD N++ L + DK+RK+RKKGE Sbjct: 229 ESHFLLKDDSQAD-DLQGSVVDTESSQLEADGNSDALTKASKDKRRKSRKKGE 280