BLASTX nr result

ID: Panax21_contig00024005 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00024005
         (351 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267100.2| PREDICTED: zinc finger CCCH domain-containin...   162   3e-38
emb|CBI17411.3| unnamed protein product [Vitis vinifera]              162   3e-38
ref|XP_002533810.1| nuclear receptor binding set domain containi...   143   2e-32
emb|CBI37995.3| unnamed protein product [Vitis vinifera]              139   2e-31
ref|XP_002306135.1| predicted protein [Populus trichocarpa] gi|2...   139   2e-31

>ref|XP_002267100.2| PREDICTED: zinc finger CCCH domain-containing protein 44-like
           [Vitis vinifera]
          Length = 1643

 Score =  162 bits (410), Expect = 3e-38
 Identities = 82/118 (69%), Positives = 96/118 (81%), Gaps = 2/118 (1%)
 Frame = -2

Query: 350 MKNGDTSVMSQFDVQALLLDYIKRNNLRDPRNKSHILCDLKLKTLFGKQRVGHFEMLKLL 171
           MKNGDTSV+SQFDVQALLL+YIKRNNLRDPR KS I+CD++L+ LFGK RVGHFEMLKLL
Sbjct: 350 MKNGDTSVLSQFDVQALLLEYIKRNNLRDPRRKSQIICDMRLRNLFGKARVGHFEMLKLL 409

Query: 170 EFHFVVKEDPPKDVFIQGGVVDINAIQVLADENNNN--LMANDKKRKTRKKGEEHVPQ 3
           E HF++KE    D  ++GGVVD  A QV ADENN+   ++  DKKRKTRKKG+E  PQ
Sbjct: 410 ESHFLIKEHSRADDIMRGGVVDTLASQVDADENNDYQLMIIKDKKRKTRKKGDERGPQ 467


>emb|CBI17411.3| unnamed protein product [Vitis vinifera]
          Length = 1362

 Score =  162 bits (410), Expect = 3e-38
 Identities = 82/118 (69%), Positives = 96/118 (81%), Gaps = 2/118 (1%)
 Frame = -2

Query: 350 MKNGDTSVMSQFDVQALLLDYIKRNNLRDPRNKSHILCDLKLKTLFGKQRVGHFEMLKLL 171
           MKNGDTSV+SQFDVQALLL+YIKRNNLRDPR KS I+CD++L+ LFGK RVGHFEMLKLL
Sbjct: 350 MKNGDTSVLSQFDVQALLLEYIKRNNLRDPRRKSQIICDMRLRNLFGKARVGHFEMLKLL 409

Query: 170 EFHFVVKEDPPKDVFIQGGVVDINAIQVLADENNNN--LMANDKKRKTRKKGEEHVPQ 3
           E HF++KE    D  ++GGVVD  A QV ADENN+   ++  DKKRKTRKKG+E  PQ
Sbjct: 410 ESHFLIKEHSRADDIMRGGVVDTLASQVDADENNDYQLMIIKDKKRKTRKKGDERGPQ 467


>ref|XP_002533810.1| nuclear receptor binding set domain containing protein 1, nsd,
           putative [Ricinus communis] gi|223526264|gb|EEF28579.1|
           nuclear receptor binding set domain containing protein
           1, nsd, putative [Ricinus communis]
          Length = 1586

 Score =  143 bits (360), Expect = 2e-32
 Identities = 68/117 (58%), Positives = 89/117 (76%), Gaps = 2/117 (1%)
 Frame = -2

Query: 350 MKNGDTSVMSQFDVQALLLDYIKRNNLRDPRNKSHILCDLKLKTLFGKQRVGHFEMLKLL 171
           M+NGDTS++SQFDVQALLLDYIKRNNLRDPR KS I+CD +LK LFGK R GHFEMLKLL
Sbjct: 378 MRNGDTSMLSQFDVQALLLDYIKRNNLRDPRQKSQIICDSRLKNLFGKPRAGHFEMLKLL 437

Query: 170 EFHFVVKEDPPKDVFIQGGVVDI--NAIQVLADENNNNLMANDKKRKTRKKGEEHVP 6
           E+HF++KE  P +  ++ GV D   + ++     ++  +M ND++R+TRKK +E  P
Sbjct: 438 EYHFLIKEKSPANDSVRVGVADAVGSLLEAAGSSDSQMIMGNDRRRRTRKKMDERGP 494


>emb|CBI37995.3| unnamed protein product [Vitis vinifera]
          Length = 868

 Score =  139 bits (350), Expect = 2e-31
 Identities = 75/118 (63%), Positives = 86/118 (72%), Gaps = 2/118 (1%)
 Frame = -2

Query: 350 MKNGDTSVMSQFDVQALLLDYIKRNNLRDPRNKSHILCDLKLKTLFGKQRVGHFEMLKLL 171
           MKNGD SV SQFDVQALLL+YIKRN LRDPR KS I+CD +L+ LFGK RVGHFEMLKLL
Sbjct: 356 MKNGDKSVTSQFDVQALLLEYIKRNKLRDPRRKSQIICDSRLEYLFGKPRVGHFEMLKLL 415

Query: 170 EFHFVVKEDPPKDVFIQGGVVDINAIQVLADENNNNLM--ANDKKRKTRKKGEEHVPQ 3
           E HF+ KED   D  +QG VVD  A Q+  D N + LM    D++RK RKKG+E   Q
Sbjct: 416 ESHFLNKEDSQTD-DLQGSVVDSEASQLEVDGNTDTLMKVGKDRRRKARKKGDERGSQ 472


>ref|XP_002306135.1| predicted protein [Populus trichocarpa] gi|222849099|gb|EEE86646.1|
           predicted protein [Populus trichocarpa]
          Length = 393

 Score =  139 bits (350), Expect = 2e-31
 Identities = 73/113 (64%), Positives = 87/113 (76%), Gaps = 2/113 (1%)
 Frame = -2

Query: 350 MKNGDTSVMSQFDVQALLLDYIKRNNLRDPRNKSHILCDLKLKTLFGKQRVGHFEMLKLL 171
           MKNGD S  SQFDVQALLLDYIKRN LRDPR KS I+CD +L+ LFGK RVGHFEMLKLL
Sbjct: 169 MKNGDKSACSQFDVQALLLDYIKRNKLRDPRRKSQIICDSRLENLFGKPRVGHFEMLKLL 228

Query: 170 EFHFVVKEDPPKDVFIQGGVVDINAIQVLADENNNNL--MANDKKRKTRKKGE 18
           E HF++K+D   D  +QG VVD  + Q+ AD N++ L   + DK+RK+RKKGE
Sbjct: 229 ESHFLLKDDSQAD-DLQGSVVDTESSQLEADGNSDALTKASKDKRRKSRKKGE 280


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