BLASTX nr result

ID: Panax21_contig00023990 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00023990
         (873 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABH07408.1| OR-Del [Brassica oleracea var. botrytis]                77   5e-12
gb|ABH07407.1| OR-Ins [Brassica oleracea var. botrytis]                77   5e-12
gb|ABH07406.1| OR-LDel [Brassica oleracea var. botrytis]               77   5e-12
gb|ABH07405.1| OR [Brassica oleracea var. botrytis]                    77   5e-12
ref|XP_002864746.1| hypothetical protein ARALYDRAFT_496333 [Arab...    77   7e-12

>gb|ABH07408.1| OR-Del [Brassica oleracea var. botrytis]
          Length = 299

 Score = 77.0 bits (188), Expect = 5e-12
 Identities = 39/58 (67%), Positives = 45/58 (77%)
 Frame = -3

Query: 526 LASNKSVL*LVNAGAFGCSFCIIEGPETMQDFAKMEVQEIQDNIRSH*NKIFLHMEEV 353
           L S+ S L   ++  F   FCIIEGPET+QDFAKM++QEIQDNIRS  NKIFLHMEEV
Sbjct: 42  LDSDSSSLDSDSSDKFAAGFCIIEGPETVQDFAKMQLQEIQDNIRSRRNKIFLHMEEV 99


>gb|ABH07407.1| OR-Ins [Brassica oleracea var. botrytis]
          Length = 318

 Score = 77.0 bits (188), Expect = 5e-12
 Identities = 39/58 (67%), Positives = 45/58 (77%)
 Frame = -3

Query: 526 LASNKSVL*LVNAGAFGCSFCIIEGPETMQDFAKMEVQEIQDNIRSH*NKIFLHMEEV 353
           L S+ S L   ++  F   FCIIEGPET+QDFAKM++QEIQDNIRS  NKIFLHMEEV
Sbjct: 42  LDSDSSSLDSDSSDKFAAGFCIIEGPETVQDFAKMQLQEIQDNIRSRRNKIFLHMEEV 99


>gb|ABH07406.1| OR-LDel [Brassica oleracea var. botrytis]
          Length = 270

 Score = 77.0 bits (188), Expect = 5e-12
 Identities = 39/58 (67%), Positives = 45/58 (77%)
 Frame = -3

Query: 526 LASNKSVL*LVNAGAFGCSFCIIEGPETMQDFAKMEVQEIQDNIRSH*NKIFLHMEEV 353
           L S+ S L   ++  F   FCIIEGPET+QDFAKM++QEIQDNIRS  NKIFLHMEEV
Sbjct: 42  LDSDSSSLDSDSSDKFAAGFCIIEGPETVQDFAKMQLQEIQDNIRSRRNKIFLHMEEV 99


>gb|ABH07405.1| OR [Brassica oleracea var. botrytis]
          Length = 305

 Score = 77.0 bits (188), Expect = 5e-12
 Identities = 39/58 (67%), Positives = 45/58 (77%)
 Frame = -3

Query: 526 LASNKSVL*LVNAGAFGCSFCIIEGPETMQDFAKMEVQEIQDNIRSH*NKIFLHMEEV 353
           L S+ S L   ++  F   FCIIEGPET+QDFAKM++QEIQDNIRS  NKIFLHMEEV
Sbjct: 42  LDSDSSSLDSDSSDKFAAGFCIIEGPETVQDFAKMQLQEIQDNIRSRRNKIFLHMEEV 99


>ref|XP_002864746.1| hypothetical protein ARALYDRAFT_496333 [Arabidopsis lyrata subsp.
           lyrata] gi|297310581|gb|EFH41005.1| hypothetical protein
           ARALYDRAFT_496333 [Arabidopsis lyrata subsp. lyrata]
          Length = 307

 Score = 76.6 bits (187), Expect = 7e-12
 Identities = 36/47 (76%), Positives = 40/47 (85%)
 Frame = -3

Query: 493 NAGAFGCSFCIIEGPETMQDFAKMEVQEIQDNIRSH*NKIFLHMEEV 353
           +A  F   FCIIEGPET+QDFAKM++QEIQDNIRS  NKIFLHMEEV
Sbjct: 55  SADKFAAGFCIIEGPETVQDFAKMQLQEIQDNIRSRRNKIFLHMEEV 101


Top