BLASTX nr result

ID: Panax21_contig00023983 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00023983
         (551 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI18348.3| unnamed protein product [Vitis vinifera]               75   7e-12

>emb|CBI18348.3| unnamed protein product [Vitis vinifera]
          Length = 945

 Score = 75.1 bits (183), Expect = 7e-12
 Identities = 55/160 (34%), Positives = 79/160 (49%), Gaps = 6/160 (3%)
 Frame = +3

Query: 21  GHPESSVIQDQPTVLGAGNGDGNDDISLLDTI--RETSLPSPGCASETESLLAQAESHKP 194
           G   SS +Q+  T  G GN  G+D +  +     RETSLPS  C   T+   +Q E H+ 
Sbjct: 510 GQAGSSTVQNMSTGSGPGNDVGSDQLKNMAVAGARETSLPSDTCIPGTDGHTSQPEHHQM 569

Query: 195 CNKVDTED-AVNPDVPSSSSVKEADNQSIG--ETLQKAVDGTGCAPRSNQEADNPKVLTS 365
            N  D    + + DVPS+ +V+ + + S G  E      D +  APRS+Q  D P+   +
Sbjct: 570 NNNQDKRGVSQSKDVPSTCAVEGSFSCSSGSDEATSGPADASDDAPRSSQRQDIPEEAKA 629

Query: 366 VPXXXXXXXXQPKRQIRQSDLQGMGGDGATSNSPT-NQNQ 482
           VP        Q K++ +Q   QG   D  TS+ P+ NQNQ
Sbjct: 630 VPLGLGMGGLQLKKRSKQPKSQGKNNDCGTSSVPSVNQNQ 669


Top