BLASTX nr result

ID: Panax21_contig00023977 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00023977
         (504 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFM35776.1| hypothetical protein, partial [Oryza eichingeri]        63   3e-08
ref|NP_001055121.1| Os05g0297900 [Oryza sativa Japonica Group] g...    63   3e-08
ref|XP_003597879.1| Signal peptidase complex catalytic subunit S...    61   1e-07
ref|NP_175669.1| signal peptidase, endoplasmic reticulum-type [A...    61   1e-07
gb|AFK43438.1| unknown [Lotus japonicus]                               61   1e-07

>gb|AFM35776.1| hypothetical protein, partial [Oryza eichingeri]
          Length = 76

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 25/28 (89%), Positives = 27/28 (96%)
 Frame = +1

Query: 1   KGDNNLGDDRLLYAHGQLWLHRHHIMGK 84
           KGDNN GDDRLLYAHGQLWLH+HHIMG+
Sbjct: 27  KGDNNFGDDRLLYAHGQLWLHQHHIMGR 54


>ref|NP_001055121.1| Os05g0297900 [Oryza sativa Japonica Group]
           gi|113578672|dbj|BAF17035.1| Os05g0297900 [Oryza sativa
           Japonica Group] gi|215700963|dbj|BAG92387.1| unnamed
           protein product [Oryza sativa Japonica Group]
           gi|218196500|gb|EEC78927.1| hypothetical protein
           OsI_19345 [Oryza sativa Indica Group]
           gi|222631002|gb|EEE63134.1| hypothetical protein
           OsJ_17942 [Oryza sativa Japonica Group]
          Length = 180

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 25/28 (89%), Positives = 27/28 (96%)
 Frame = +1

Query: 1   KGDNNLGDDRLLYAHGQLWLHRHHIMGK 84
           KGDNN GDDRLLYAHGQLWLH+HHIMG+
Sbjct: 115 KGDNNFGDDRLLYAHGQLWLHQHHIMGR 142


>ref|XP_003597879.1| Signal peptidase complex catalytic subunit SEC11A [Medicago
           truncatula] gi|87162920|gb|ABD28715.1| Peptidase S24,
           S26A and S26B [Medicago truncatula]
           gi|355486927|gb|AES68130.1| Signal peptidase complex
           catalytic subunit SEC11A [Medicago truncatula]
          Length = 180

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 25/28 (89%), Positives = 26/28 (92%)
 Frame = +1

Query: 1   KGDNNLGDDRLLYAHGQLWLHRHHIMGK 84
           KGDNN GDDRLLYAHGQLWL RHHIMG+
Sbjct: 115 KGDNNYGDDRLLYAHGQLWLQRHHIMGR 142


>ref|NP_175669.1| signal peptidase, endoplasmic reticulum-type [Arabidopsis thaliana]
           gi|297847646|ref|XP_002891704.1| hypothetical protein
           ARALYDRAFT_474386 [Arabidopsis lyrata subsp. lyrata]
           gi|5903045|gb|AAD55604.1|AC008016_14 Similar to
           gb|AF108945 signal peptidase 18 kDa subunit from Homo
           sapiens. ESTs gb|H76629, gb|H76949 and gb|H76216 come
           from this gene [Arabidopsis thaliana]
           gi|17381152|gb|AAL36388.1| putative signal peptidase
           subunit [Arabidopsis thaliana]
           gi|20465737|gb|AAM20337.1| putative signal peptidase
           subunit [Arabidopsis thaliana]
           gi|21536563|gb|AAM60895.1| signal peptidase subunit,
           putative [Arabidopsis thaliana]
           gi|297337546|gb|EFH67963.1| hypothetical protein
           ARALYDRAFT_474386 [Arabidopsis lyrata subsp. lyrata]
           gi|332194707|gb|AEE32828.1| signal peptidase,
           endoplasmic reticulum-type [Arabidopsis thaliana]
          Length = 180

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 25/28 (89%), Positives = 26/28 (92%)
 Frame = +1

Query: 1   KGDNNLGDDRLLYAHGQLWLHRHHIMGK 84
           KGDNN GDDRLLYA GQLWLHRHHIMG+
Sbjct: 115 KGDNNYGDDRLLYAEGQLWLHRHHIMGR 142


>gb|AFK43438.1| unknown [Lotus japonicus]
          Length = 180

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 25/28 (89%), Positives = 26/28 (92%)
 Frame = +1

Query: 1   KGDNNLGDDRLLYAHGQLWLHRHHIMGK 84
           KGDNN GDDRLLYAHGQLWL RHHIMG+
Sbjct: 115 KGDNNYGDDRLLYAHGQLWLQRHHIMGR 142


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