BLASTX nr result

ID: Panax21_contig00023926 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00023926
         (678 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002333910.1| predicted protein [Populus trichocarpa] gi|2...    44   3e-07
ref|XP_002327345.1| predicted protein [Populus trichocarpa] gi|2...    44   3e-07

>ref|XP_002333910.1| predicted protein [Populus trichocarpa] gi|222838910|gb|EEE77261.1|
           predicted protein [Populus trichocarpa]
          Length = 391

 Score = 43.5 bits (101), Expect(2) = 3e-07
 Identities = 23/55 (41%), Positives = 31/55 (56%), Gaps = 3/55 (5%)
 Frame = +1

Query: 493 YLLRFDQNLNVQ-HFQLPWKKRTKPYGFIGASNRNLFYSNND--SVSLKVWLFED 648
           YL+RFD N       +LP K     +GFIG S  +L+YSN D   + + +WL ED
Sbjct: 237 YLIRFDLNAPSDVAIELPHKNAADRHGFIGMSRGSLYYSNQDESGLMISIWLLED 291



 Score = 37.0 bits (84), Expect(2) = 3e-07
 Identities = 19/59 (32%), Positives = 36/59 (61%), Gaps = 10/59 (16%)
 Frame = +2

Query: 362 KVDVFSSETGKWVTRFIPVLPE----------HNEMVRPVYLNGILYVLTKVLIISYVL 508
           K+D+FSS+TGKWV R + +  E          +  + R +YL+G++Y L+   +++Y++
Sbjct: 183 KLDIFSSDTGKWVRRGVMLSTELPLAAADADKYGCIRRSIYLDGMIYKLS--FVVNYLI 239


>ref|XP_002327345.1| predicted protein [Populus trichocarpa] gi|222835715|gb|EEE74150.1|
           predicted protein [Populus trichocarpa]
          Length = 391

 Score = 43.5 bits (101), Expect(2) = 3e-07
 Identities = 23/55 (41%), Positives = 32/55 (58%), Gaps = 3/55 (5%)
 Frame = +1

Query: 493 YLLRFDQNLNVQ-HFQLPWKKRTKPYGFIGASNRNLFYSNND--SVSLKVWLFED 648
           YL+RFD N       +LP K     +GFIG S  +L+YSN+D   + + +WL ED
Sbjct: 237 YLIRFDLNAPSDVAIELPHKNAAACHGFIGMSRGSLYYSNHDESGLMISIWLLED 291



 Score = 37.0 bits (84), Expect(2) = 3e-07
 Identities = 19/59 (32%), Positives = 36/59 (61%), Gaps = 10/59 (16%)
 Frame = +2

Query: 362 KVDVFSSETGKWVTRFIPVLPE----------HNEMVRPVYLNGILYVLTKVLIISYVL 508
           K+D+FSS+TGKWV R + +  E          +  + R +YL+G++Y L+   +++Y++
Sbjct: 183 KLDIFSSDTGKWVRRGVMLSTELPLAAADADKYGCIRRSIYLDGMIYKLS--FVVNYLI 239


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