BLASTX nr result

ID: Panax21_contig00023919 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00023919
         (918 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511186.1| conserved hypothetical protein [Ricinus comm...   419   e-115
ref|XP_002297844.1| predicted protein [Populus trichocarpa] gi|2...   409   e-112
ref|XP_004135325.1| PREDICTED: F-box protein At1g67340-like [Cuc...   405   e-111
ref|XP_003538548.1| PREDICTED: F-box protein At1g67340-like [Gly...   405   e-111
ref|XP_002514915.1| conserved hypothetical protein [Ricinus comm...   404   e-110

>ref|XP_002511186.1| conserved hypothetical protein [Ricinus communis]
           gi|223550301|gb|EEF51788.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 349

 Score =  419 bits (1077), Expect = e-115
 Identities = 219/316 (69%), Positives = 241/316 (76%), Gaps = 17/316 (5%)
 Frame = +2

Query: 17  KKKPRFVHEISDLFDGLPDDIVISILCKLSSTARCPSDFISILLTCTRLNRLGLHPLVLH 196
           +K  R   E SDLFD LPDDIV+ IL KLSS+A CPSDFI+IL TC RLNRL L P+VL 
Sbjct: 7   QKTSRRTPEKSDLFDELPDDIVVCILSKLSSSASCPSDFINILFTCKRLNRLALQPVVLS 66

Query: 197 KACPNTLAVRAKNWSDSAHRFLKYCVNSGNIEASYILGMIRFYCLQNQGGGASLMAKAAI 376
           KA P T AV+AKNWSDSAHRFLK C+N+GN EASY LGMIRFYCLQN+G GASLMAKAAI
Sbjct: 67  KAGPQTFAVKAKNWSDSAHRFLKLCINAGNTEASYTLGMIRFYCLQNRGVGASLMAKAAI 126

Query: 377 KSHAPALHSLAVIQFNGSGGVKNNKDLRAGVALCARAAFLGHIDSLRELGHCFQDGYGVR 556
           KSHAPAL+SLAV+QFNGSGG K +KDLRAGV+LCARAA LGHID+LRELGHC QDGYGV 
Sbjct: 127 KSHAPALYSLAVMQFNGSGGSKIDKDLRAGVSLCARAAVLGHIDALRELGHCLQDGYGVA 186

Query: 557 KNIDEGRRLLIQANARELACVIRSCSNHVTCQSERGMSRMDLGCR-----------DFGW 703
           +NI EGRRLL+QANARELA  +RS    +T Q      R    C            DFG 
Sbjct: 187 QNIAEGRRLLVQANARELASSLRSM---LTWQPHNQHHRQYASCEVMESAGCPLLSDFGC 243

Query: 704 ---AREVHPANRFLAEWFELGD---GKGLRRCSDVSCGRPETRRNEFRRCSCCGKVNYCS 865
              AREVHPANRFL+EWFE G    G GLR CS   CGRPETR +EFRRCS CG VNYCS
Sbjct: 244 NVPAREVHPANRFLSEWFESGRGLLGPGLRLCSHSGCGRPETRPHEFRRCSVCGTVNYCS 303

Query: 866 RGCQAHDWKVRHKVEC 913
           RGCQA DWK+RHK+EC
Sbjct: 304 RGCQALDWKLRHKMEC 319


>ref|XP_002297844.1| predicted protein [Populus trichocarpa] gi|222845102|gb|EEE82649.1|
            predicted protein [Populus trichocarpa]
          Length = 403

 Score =  409 bits (1050), Expect = e-112
 Identities = 211/330 (63%), Positives = 244/330 (73%), Gaps = 26/330 (7%)
 Frame = +2

Query: 2    EEMVYKKKPRFVHE----ISDLFDGLPDDIVISILCKLSSTARCPSDFISILLTCTRLNR 169
            E MV +K+ R V       +DLF+ LPDD+VISILCKLSS+A CPSDFI++L+TC RLN 
Sbjct: 43   EYMVCRKRNRLVSTGKKGETDLFESLPDDLVISILCKLSSSASCPSDFINVLITCRRLNG 102

Query: 170  LGLHPLVLHKACPNTLAVRAKNWSDSAHRFLKYCVNSGNIEASYILGMIRFYCLQNQGGG 349
            LGLH LVL KA P + A++A NWSDSAHRFLK C ++GN EA Y LGMIRFYCLQN+G G
Sbjct: 103  LGLHSLVLSKASPKSFAIKANNWSDSAHRFLKLCADAGNAEACYTLGMIRFYCLQNRGSG 162

Query: 350  ASLMAKAAIKSHAPALHSLAVIQFNGSGGVKNNKDLRAGVALCARAAFLGHIDSLRELGH 529
            ASLMAKAAI SHAPAL+SLAVIQFNGSGG K++KDLRAGVALCARAAFLGHID+LRELGH
Sbjct: 163  ASLMAKAAISSHAPALYSLAVIQFNGSGGSKSDKDLRAGVALCARAAFLGHIDALRELGH 222

Query: 530  CFQDGYGVRKNIDEGRRLLIQANARELACVIRSCSNHVTCQ----------------SER 661
            C QDGYGVR+N+ EGRR L+QANARELA V+ +  + +  +                SE 
Sbjct: 223  CLQDGYGVRQNVTEGRRFLVQANARELAAVLSNPDSGLPTRAWLTWNPHAHPNHRHPSEN 282

Query: 662  GMSRMDLGCRDFGW---AREVHPANRFLAEWFEL---GDGKGLRRCSDVSCGRPETRRNE 823
            G S   L   DFG    A E HPA+RF+ EWF +     G GLR CS   CGRPETR++E
Sbjct: 283  GPSGCPL-LSDFGCNVPAPEAHPASRFMTEWFAIRGGSAGSGLRLCSHTGCGRPETRKHE 341

Query: 824  FRRCSCCGKVNYCSRGCQAHDWKVRHKVEC 913
            FRRCS CG VNYCSR CQA DWK+RHK EC
Sbjct: 342  FRRCSVCGAVNYCSRACQALDWKLRHKEEC 371


>ref|XP_004135325.1| PREDICTED: F-box protein At1g67340-like [Cucumis sativus]
           gi|449494931|ref|XP_004159686.1| PREDICTED: F-box
           protein At1g67340-like [Cucumis sativus]
          Length = 382

 Score =  405 bits (1042), Expect = e-111
 Identities = 210/309 (67%), Positives = 235/309 (76%), Gaps = 20/309 (6%)
 Frame = +2

Query: 47  SDLFDGLPDDIVISILCKLSSTARCPSDFISILLTCTRLNRLGLHPLVLHKACPNTLAVR 226
           SDLFD LPDD+VI+IL  LSS A  PSDFI+ILLTC RLN LGL+P+VL +A   T A+R
Sbjct: 50  SDLFDSLPDDLVITILSNLSSAASSPSDFINILLTCKRLNNLGLNPMVLSRASQKTFAIR 109

Query: 227 AKNWSDSAHRFLKYCVNSGNIEASYILGMIRFYCLQNQGGGASLMAKAAIKSHAPALHSL 406
           AKNW++SAHRFLK C ++GN+EA Y LGMIRFYCLQN+G GASLMAKAAI SHAPAL+SL
Sbjct: 110 AKNWTESAHRFLKQCSDAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAICSHAPALYSL 169

Query: 407 AVIQFNGSGGVKNNKDLRAGVALCARAAFLGHIDSLRELGHCFQDGYGVRKNIDEGRRLL 586
           AVIQFNGSGG KN+KDLRAGVALCARAAFLGHID+LRELGHC QDGYGVR+NI EGRR L
Sbjct: 170 AVIQFNGSGGSKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNITEGRRFL 229

Query: 587 IQANARELACVI-----------RSCSNHVTCQSERGMSRMDLGC---RDFGW---AREV 715
           +QANARELA V+           RSC    T Q          GC    DFG    A E 
Sbjct: 230 VQANARELAAVLSSEAASSVAASRSCLTWNT-QPPHHRHVTGSGCPLLSDFGCNIPAPEA 288

Query: 716 HPANRFLAEWFEL---GDGKGLRRCSDVSCGRPETRRNEFRRCSCCGKVNYCSRGCQAHD 886
           HPA++FLAEWFE      G GLR CS V CGRPETRR+EFRRCS CG VNYCSR CQA D
Sbjct: 289 HPASQFLAEWFEARGGSPGNGLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRACQALD 348

Query: 887 WKVRHKVEC 913
           WK+RHK++C
Sbjct: 349 WKLRHKIDC 357


>ref|XP_003538548.1| PREDICTED: F-box protein At1g67340-like [Glycine max]
          Length = 350

 Score =  405 bits (1042), Expect = e-111
 Identities = 203/316 (64%), Positives = 238/316 (75%), Gaps = 17/316 (5%)
 Frame = +2

Query: 17  KKKPRFVHEISDLFDGLPDDIVISILCKLSSTARCPSDFISILLTCTRLNRLGLHPLVLH 196
           K++     + SD FD LPDD+V+SILCKLSSTA  PSDFIS+L+TC RLN LGLH LVL 
Sbjct: 5   KRQKTSPDKTSDCFDSLPDDLVLSILCKLSSTATSPSDFISVLITCKRLNSLGLHSLVLS 64

Query: 197 KACPNTLAVRAKNWSDSAHRFLKYCVNSGNIEASYILGMIRFYCLQNQGGGASLMAKAAI 376
           KA   T +V+AKNW DS HRFLK+C ++GNIEA Y LG+IRFYCLQN+G GA+LMAKAA+
Sbjct: 65  KASHKTFSVKAKNWCDSLHRFLKHCADAGNIEACYTLGLIRFYCLQNRGSGAALMAKAAM 124

Query: 377 KSHAPALHSLAVIQFNGSGGVKNNKDLRAGVALCARAAFLGHIDSLRELGHCFQDGYGVR 556
            SHAPAL+SLAVIQFNGSGG KN+KDLRAGVALCARAAFLGHID+LRELGHC QDGYGV+
Sbjct: 125 NSHAPALYSLAVIQFNGSGGTKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVK 184

Query: 557 KNIDEGRRLLIQANARELACVIRSCSN--------HVTCQSERGMSRMDLGC---RDFGW 703
           +N+ EGRR L+QAN RELA V+ + +N        H      R  S    GC    D+G 
Sbjct: 185 QNVTEGRRFLVQANVRELAAVLSAGNNKRPWLTWSHQPVPHPRLRSETGSGCPLLSDYGC 244

Query: 704 ---AREVHPANRFLAEWFELGDG---KGLRRCSDVSCGRPETRRNEFRRCSCCGKVNYCS 865
              A EVHPA++F++EWF++  G    G+R CS   CGRPETRR+EFRRCS CG VNYCS
Sbjct: 245 NVPAPEVHPASQFMSEWFDIRGGFPSAGMRLCSQSGCGRPETRRHEFRRCSVCGVVNYCS 304

Query: 866 RGCQAHDWKVRHKVEC 913
           R CQA DWK RHK EC
Sbjct: 305 RACQALDWKFRHKAEC 320


>ref|XP_002514915.1| conserved hypothetical protein [Ricinus communis]
            gi|223545966|gb|EEF47469.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 394

 Score =  404 bits (1039), Expect = e-110
 Identities = 207/327 (63%), Positives = 243/327 (74%), Gaps = 23/327 (7%)
 Frame = +2

Query: 2    EEMVYKKKPRFVHEI-----SDLFDGLPDDIVISILCKLSSTARCPSDFISILLTCTRLN 166
            E+MV +K+ R   E      +D F  LPDD+V  ILCKLSS+A CPSDF+++L TC RLN
Sbjct: 39   EQMVCRKRQRLSPEKIAGDKTDFFYALPDDLVTCILCKLSSSASCPSDFVNVLATCKRLN 98

Query: 167  RLGLHPLVLHKACPNTLAVRAKNWSDSAHRFLKYCVNSGNIEASYILGMIRFYCLQNQGG 346
             LGL+ +VL KA P T A++AKNWSDSAHRFLK C ++GN+EA Y LGMIRFYCLQN+G 
Sbjct: 99   GLGLNSIVLSKASPKTFALKAKNWSDSAHRFLKLCADAGNVEACYTLGMIRFYCLQNRGS 158

Query: 347  GASLMAKAAIKSHAPALHSLAVIQFNGSGGVKNNKDLRAGVALCARAAFLGHIDSLRELG 526
            GASLMAKAAI SHAPAL+SLAVIQFNGSGG KN+KDLRAGVALCARAAFLGHID+LRELG
Sbjct: 159  GASLMAKAAISSHAPALYSLAVIQFNGSGGSKNDKDLRAGVALCARAAFLGHIDALRELG 218

Query: 527  HCFQDGYGVRKNIDEGRRLLIQANARELACVIRSCSNHVTCQS---------ERGMSRMD 679
            HC QDGYGVR+NI EGRR L+QANARELA V+ + ++ +  ++                 
Sbjct: 219  HCLQDGYGVRQNIAEGRRFLVQANARELAAVLSNPNSDLNTRAWVNWNPHAHSNHRHASG 278

Query: 680  LGC---RDFGW---AREVHPANRFLAEWFEL---GDGKGLRRCSDVSCGRPETRRNEFRR 832
             GC    DFG    A E HPA+RF+A+WF       G+GLR CS V CGRPETR++EFRR
Sbjct: 279  PGCPLLSDFGCNVPAPEAHPASRFMADWFATRGGSPGQGLRLCSHVGCGRPETRKHEFRR 338

Query: 833  CSCCGKVNYCSRGCQAHDWKVRHKVEC 913
            CS CG VNYCSR CQA DWK+RHK EC
Sbjct: 339  CSVCGAVNYCSRACQALDWKLRHKEEC 365


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