BLASTX nr result

ID: Panax21_contig00023914 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00023914
         (832 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADV59367.1| GAGA-binding transcriptional activator [Artemisia...   114   4e-23
gb|ADV59369.1| GAGA-binding transcriptional activator [Artemisia...   110   4e-22
ref|XP_002521909.1| conserved hypothetical protein [Ricinus comm...   108   1e-21
ref|XP_002285185.1| PREDICTED: protein BASIC PENTACYSTEINE1 isof...    99   9e-19
emb|CAN69256.1| hypothetical protein VITISV_038800 [Vitis vinifera]    99   9e-19

>gb|ADV59367.1| GAGA-binding transcriptional activator [Artemisia annua]
          Length = 293

 Score =  114 bits (284), Expect = 4e-23
 Identities = 61/117 (52%), Positives = 72/117 (61%), Gaps = 13/117 (11%)
 Frame = +1

Query: 520 MRNWNYYEPSFKEHLGLQLMSPMGDHRDTKPFLSSREN-------------PRNCVVSKT 660
           +RNW YYEP FKEHLGLQLMSPMGDHRDTKP+ SSREN             P   +VS+ 
Sbjct: 6   LRNWGYYEP-FKEHLGLQLMSPMGDHRDTKPYFSSRENPLLLNPNGATYHHPHTRMVSEL 64

Query: 661 PVPMNYMRDNWIQRERLFHMLLGNPNFGVLPDAPATHHPKKII*PLDSSSKDQGMNV 831
              MNYMRD WIQRER  HM  GNP++  L +  ++H    +  P    SKD  MN+
Sbjct: 65  TGHMNYMRDGWIQRERFHHMQPGNPSYSALSNTMSSHDMHLV--PALDMSKDHVMNM 119


>gb|ADV59369.1| GAGA-binding transcriptional activator [Artemisia annua]
          Length = 298

 Score =  110 bits (275), Expect = 4e-22
 Identities = 56/97 (57%), Positives = 67/97 (69%), Gaps = 17/97 (17%)
 Frame = +1

Query: 520 MRNWNYYEP-SFKEHLGLQLMSPMGDHRDTKPFLSSRENP----------------RNCV 648
           +RNW YYEP SFKEHLGLQLMSPM DHRDTKPFLS RE+P                RN V
Sbjct: 8   IRNWGYYEPPSFKEHLGLQLMSPMIDHRDTKPFLSPREHPIMVNPNGVMPYHHNHLRNSV 67

Query: 649 VSKTPVPMNYMRDNWIQRERLFHMLLGNPNFGVLPDA 759
           V+++P+PM YMRD WIQR+R  HM  GN N+ ++ D+
Sbjct: 68  VNESPLPMQYMRDGWIQRDRHHHMHPGNNNYPLIHDS 104


>ref|XP_002521909.1| conserved hypothetical protein [Ricinus communis]
           gi|223538947|gb|EEF40545.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 283

 Score =  108 bits (270), Expect = 1e-21
 Identities = 56/97 (57%), Positives = 66/97 (68%), Gaps = 13/97 (13%)
 Frame = +1

Query: 520 MRNWNYYEPSFKEHLGLQLMSPMGDHRDTKPFLSSRE------------NPRNCVVSKTP 663
           +RNW YYEP+FK HLGLQLMS M D RDTK FL  R+            +PR+CVVS  P
Sbjct: 12  IRNWGYYEPNFKGHLGLQLMSSMAD-RDTKHFLPGRDPNGIMVGANGAFHPRDCVVSDAP 70

Query: 664 VPMNYMRDNWI-QRERLFHMLLGNPNFGVLPDAPATH 771
            PMNYMRD+WI QRE+LF+ML  NPN+ VLP+    H
Sbjct: 71  GPMNYMRDSWISQREKLFNMLPPNPNYAVLPETSGAH 107


>ref|XP_002285185.1| PREDICTED: protein BASIC PENTACYSTEINE1 isoform 1 [Vitis vinifera]
           gi|183604855|gb|ACC64525.1| GAGA-binding transcriptional
           activator BBR/BPC1-like [Vitis vinifera]
           gi|183604857|gb|ACC64526.1| GAGA-binding transcriptional
           activator BBR/BPC1-like [Vitis vinifera]
          Length = 293

 Score = 99.4 bits (246), Expect = 9e-19
 Identities = 50/93 (53%), Positives = 66/93 (70%), Gaps = 12/93 (12%)
 Frame = +1

Query: 520 MRNWNYYEPSFKEHLGLQLMSPMGDHRDTKPFLSSRE-----------NPRNCVVSKTPV 666
           MRNW YYEP+FK HL LQLMS + + RDTKPFL  R+           +PR+C+VS+ PV
Sbjct: 9   MRNWGYYEPAFKGHLNLQLMSSVAE-RDTKPFLPGRDSPLMVSANGAFHPRDCMVSEAPV 67

Query: 667 PMNYMRDNWI-QRERLFHMLLGNPNFGVLPDAP 762
            M+Y+RD+WI QR++  ++L GN NF VLP+AP
Sbjct: 68  HMDYVRDSWINQRDKFLNILPGNSNFQVLPEAP 100


>emb|CAN69256.1| hypothetical protein VITISV_038800 [Vitis vinifera]
          Length = 411

 Score = 99.4 bits (246), Expect = 9e-19
 Identities = 50/93 (53%), Positives = 66/93 (70%), Gaps = 12/93 (12%)
 Frame = +1

Query: 520 MRNWNYYEPSFKEHLGLQLMSPMGDHRDTKPFLSSRE-----------NPRNCVVSKTPV 666
           MRNW YYEP+FK HL LQLMS + + RDTKPFL  R+           +PR+C+VS+ PV
Sbjct: 9   MRNWGYYEPAFKGHLNLQLMSSVAE-RDTKPFLPGRDSPLMVSANGAFHPRDCMVSEAPV 67

Query: 667 PMNYMRDNWI-QRERLFHMLLGNPNFGVLPDAP 762
            M+Y+RD+WI QR++  ++L GN NF VLP+AP
Sbjct: 68  HMDYVRDSWINQRDKFLNILPGNSNFQVLPEAP 100


Top