BLASTX nr result

ID: Panax21_contig00023911 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00023911
         (530 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634851.1| PREDICTED: pentatricopeptide repeat-containi...   283   1e-74
emb|CBI32989.3| unnamed protein product [Vitis vinifera]              283   1e-74
emb|CAN77919.1| hypothetical protein VITISV_027645 [Vitis vinifera]   283   1e-74
ref|XP_004145104.1| PREDICTED: pentatricopeptide repeat-containi...   263   1e-68
ref|XP_002518506.1| pentatricopeptide repeat-containing protein,...   253   9e-66

>ref|XP_003634851.1| PREDICTED: pentatricopeptide repeat-containing protein At1g61870,
           mitochondrial-like [Vitis vinifera]
          Length = 396

 Score =  283 bits (724), Expect = 1e-74
 Identities = 131/176 (74%), Positives = 150/176 (85%)
 Frame = +2

Query: 2   GTWIAGFYKEEKFDDVGKVLELMRKHEMHPGISIYNIRIQSLCKLRKSAEANALLDGLLS 181
           G  +AGFY EEK++DVGKVL++M +++M PGIS YNIRIQSLCKL+KS+EA ALLDG+L+
Sbjct: 214 GILLAGFYNEEKYEDVGKVLKMMEEYKMQPGISTYNIRIQSLCKLKKSSEAKALLDGILA 273

Query: 182 RDMKPNSVTYCHLIHGFCKEGNLDEAKNLFKKMINGGCKPDSDCYFTLVYFLCQGGDFET 361
           R MKPNS TYCHLIHGFCKEGNLDEAK LFK M+N GCKPDSDCYFTLVYFLCQGGDFE+
Sbjct: 274 RRMKPNSETYCHLIHGFCKEGNLDEAKKLFKDMVNRGCKPDSDCYFTLVYFLCQGGDFES 333

Query: 362 ALLICKESMAKGWIPNFSTMKSLVNGLANISKVDEALELVGQMKEKFPNFTESWNE 529
           AL  CKE M KGW PN STM SLVNGL +ISKV+EA EL+GQ+KEKF    + WNE
Sbjct: 334 ALRFCKECMEKGWFPNISTMTSLVNGLVSISKVEEARELIGQIKEKFSRNVDKWNE 389


>emb|CBI32989.3| unnamed protein product [Vitis vinifera]
          Length = 412

 Score =  283 bits (724), Expect = 1e-74
 Identities = 131/176 (74%), Positives = 150/176 (85%)
 Frame = +2

Query: 2   GTWIAGFYKEEKFDDVGKVLELMRKHEMHPGISIYNIRIQSLCKLRKSAEANALLDGLLS 181
           G  +AGFY EEK++DVGKVL++M +++M PGIS YNIRIQSLCKL+KS+EA ALLDG+L+
Sbjct: 230 GILLAGFYNEEKYEDVGKVLKMMEEYKMQPGISTYNIRIQSLCKLKKSSEAKALLDGILA 289

Query: 182 RDMKPNSVTYCHLIHGFCKEGNLDEAKNLFKKMINGGCKPDSDCYFTLVYFLCQGGDFET 361
           R MKPNS TYCHLIHGFCKEGNLDEAK LFK M+N GCKPDSDCYFTLVYFLCQGGDFE+
Sbjct: 290 RRMKPNSETYCHLIHGFCKEGNLDEAKKLFKDMVNRGCKPDSDCYFTLVYFLCQGGDFES 349

Query: 362 ALLICKESMAKGWIPNFSTMKSLVNGLANISKVDEALELVGQMKEKFPNFTESWNE 529
           AL  CKE M KGW PN STM SLVNGL +ISKV+EA EL+GQ+KEKF    + WNE
Sbjct: 350 ALRFCKECMEKGWFPNISTMTSLVNGLVSISKVEEARELIGQIKEKFSRNVDKWNE 405


>emb|CAN77919.1| hypothetical protein VITISV_027645 [Vitis vinifera]
          Length = 396

 Score =  283 bits (724), Expect = 1e-74
 Identities = 131/176 (74%), Positives = 150/176 (85%)
 Frame = +2

Query: 2   GTWIAGFYKEEKFDDVGKVLELMRKHEMHPGISIYNIRIQSLCKLRKSAEANALLDGLLS 181
           G  +AGFY EEK++DVGKVL++M +++M PGIS YNIRIQSLCKL+KS+EA ALLDG+L+
Sbjct: 214 GILLAGFYNEEKYEDVGKVLKMMEEYKMQPGISTYNIRIQSLCKLKKSSEAKALLDGILA 273

Query: 182 RDMKPNSVTYCHLIHGFCKEGNLDEAKNLFKKMINGGCKPDSDCYFTLVYFLCQGGDFET 361
           R MKPNS TYCHLIHGFCKEGNLDEAK LFK M+N GCKPDSDCYFTLVYFLCQGGDFE+
Sbjct: 274 RRMKPNSETYCHLIHGFCKEGNLDEAKKLFKDMVNRGCKPDSDCYFTLVYFLCQGGDFES 333

Query: 362 ALLICKESMAKGWIPNFSTMKSLVNGLANISKVDEALELVGQMKEKFPNFTESWNE 529
           AL  CKE M KGW PN STM SLVNGL +ISKV+EA EL+GQ+KEKF    + WNE
Sbjct: 334 ALRFCKECMEKGWFPNISTMTSLVNGLVSISKVEEAQELIGQIKEKFSRNVDKWNE 389


>ref|XP_004145104.1| PREDICTED: pentatricopeptide repeat-containing protein At1g61870,
           mitochondrial-like [Cucumis sativus]
           gi|449471723|ref|XP_004153390.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g61870,
           mitochondrial-like [Cucumis sativus]
           gi|449530564|ref|XP_004172264.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g61870,
           mitochondrial-like [Cucumis sativus]
          Length = 405

 Score =  263 bits (672), Expect = 1e-68
 Identities = 119/174 (68%), Positives = 145/174 (83%)
 Frame = +2

Query: 8   WIAGFYKEEKFDDVGKVLELMRKHEMHPGISIYNIRIQSLCKLRKSAEANALLDGLLSRD 187
           W+AG Y EEKF+DV KVL LM K+ +  G++ YN RI+SLCKL++S EA AL DG+LSR 
Sbjct: 225 WLAGCYMEEKFEDVEKVLNLMEKYGVRRGVATYNARIRSLCKLKRSTEAKALFDGMLSRG 284

Query: 188 MKPNSVTYCHLIHGFCKEGNLDEAKNLFKKMINGGCKPDSDCYFTLVYFLCQGGDFETAL 367
           M PNSVTYC LIHGFCKEGNLDEAK++FK+MIN GC+PDS+CYFTL YFLC+GGD+ETA 
Sbjct: 285 MDPNSVTYCELIHGFCKEGNLDEAKSIFKRMINSGCQPDSECYFTLTYFLCRGGDYETAF 344

Query: 368 LICKESMAKGWIPNFSTMKSLVNGLANISKVDEALELVGQMKEKFPNFTESWNE 529
            IC ESM KGW+PNFSTMKSLV+GL +ISKV+EA +L+GQ+KE+F    E W+E
Sbjct: 345 KICLESMKKGWVPNFSTMKSLVDGLVSISKVEEAKQLIGQIKERFSKNVEKWSE 398


>ref|XP_002518506.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223542351|gb|EEF43893.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 397

 Score =  253 bits (647), Expect = 9e-66
 Identities = 120/177 (67%), Positives = 145/177 (81%), Gaps = 1/177 (0%)
 Frame = +2

Query: 2   GTWIAGFYKEEKFDDVGKVLELMR-KHEMHPGISIYNIRIQSLCKLRKSAEANALLDGLL 178
           G  +AGFYKEEK++DVGKVLE+M+ K+ + PG+S YNIRIQSLCKL+KSAEA ALLDG+L
Sbjct: 214 GHLLAGFYKEEKYEDVGKVLEMMKDKYGIRPGVSTYNIRIQSLCKLKKSAEAKALLDGML 273

Query: 179 SRDMKPNSVTYCHLIHGFCKEGNLDEAKNLFKKMINGGCKPDSDCYFTLVYFLCQGGDFE 358
           SR MKPNSVTY HLIHGFC EG+L+  K LFK M+N G +PDS CYFTL+++LC+G DFE
Sbjct: 274 SRQMKPNSVTYAHLIHGFCNEGDLEGGKRLFKDMVNRGYQPDSACYFTLLHYLCKGQDFE 333

Query: 359 TALLICKESMAKGWIPNFSTMKSLVNGLANISKVDEALELVGQMKEKFPNFTESWNE 529
           TAL ICKES+ K W+PN +TMKSLVNGLA I KVDEA EL+ ++KEKF     +W E
Sbjct: 334 TALRICKESIGKDWVPNIATMKSLVNGLAGIGKVDEAKELIAKIKEKFTKNVSTWEE 390


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