BLASTX nr result

ID: Panax21_contig00023892 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00023892
         (557 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34155.3| unnamed protein product [Vitis vinifera]              326   2e-87
ref|XP_002279923.1| PREDICTED: uncharacterized protein LOC100267...   326   2e-87
ref|XP_002531290.1| protein with unknown function [Ricinus commu...   319   2e-85
ref|XP_004171233.1| PREDICTED: mediator of RNA polymerase II tra...   318   4e-85
ref|XP_004139381.1| PREDICTED: mediator of RNA polymerase II tra...   318   4e-85

>emb|CBI34155.3| unnamed protein product [Vitis vinifera]
          Length = 1724

 Score =  326 bits (835), Expect = 2e-87
 Identities = 155/184 (84%), Positives = 168/184 (91%)
 Frame = +2

Query: 2    LPISVLREFLKLIAWKKGLAQAQGGDIAPAQKSRIELCLENHSGLNTNGNSEYSSASKSN 181
            LPISVLREFLKLIAWKKGLAQAQGGD APAQK RIELCLENH+GL  + +SE SS SKSN
Sbjct: 1534 LPISVLREFLKLIAWKKGLAQAQGGDTAPAQKPRIELCLENHAGLKMDESSENSSTSKSN 1593

Query: 182  IHYDRPHNSVDFGLTVVLDPTHIPHINAAGGAAWLPYCVSVRLRYSFGEKPTVSFLGMKG 361
            IHYDR HNSVDFGLTVVLDP HIPHINAAGGAAWLPYCVSVRLRYSFGE  TVSFLGM+G
Sbjct: 1594 IHYDRSHNSVDFGLTVVLDPAHIPHINAAGGAAWLPYCVSVRLRYSFGENSTVSFLGMEG 1653

Query: 362  SHGGRACWLRLDDWEKCKQRVVRTMEMNGCSAGDLNQGRLRIIADSVQRTLHVCLQGLRD 541
            SHGGRACWLR+DDWEKCK RVVRT+EM+GCS GD++QGRL+I+AD+VQR LHV LQGLRD
Sbjct: 1654 SHGGRACWLRIDDWEKCKHRVVRTVEMSGCSPGDMSQGRLKIVADNVQRALHVNLQGLRD 1713

Query: 542  GNAV 553
            G+ V
Sbjct: 1714 GSGV 1717


>ref|XP_002279923.1| PREDICTED: uncharacterized protein LOC100267561 [Vitis vinifera]
          Length = 1758

 Score =  326 bits (835), Expect = 2e-87
 Identities = 155/184 (84%), Positives = 168/184 (91%)
 Frame = +2

Query: 2    LPISVLREFLKLIAWKKGLAQAQGGDIAPAQKSRIELCLENHSGLNTNGNSEYSSASKSN 181
            LPISVLREFLKLIAWKKGLAQAQGGD APAQK RIELCLENH+GL  + +SE SS SKSN
Sbjct: 1568 LPISVLREFLKLIAWKKGLAQAQGGDTAPAQKPRIELCLENHAGLKMDESSENSSTSKSN 1627

Query: 182  IHYDRPHNSVDFGLTVVLDPTHIPHINAAGGAAWLPYCVSVRLRYSFGEKPTVSFLGMKG 361
            IHYDR HNSVDFGLTVVLDP HIPHINAAGGAAWLPYCVSVRLRYSFGE  TVSFLGM+G
Sbjct: 1628 IHYDRSHNSVDFGLTVVLDPAHIPHINAAGGAAWLPYCVSVRLRYSFGENSTVSFLGMEG 1687

Query: 362  SHGGRACWLRLDDWEKCKQRVVRTMEMNGCSAGDLNQGRLRIIADSVQRTLHVCLQGLRD 541
            SHGGRACWLR+DDWEKCK RVVRT+EM+GCS GD++QGRL+I+AD+VQR LHV LQGLRD
Sbjct: 1688 SHGGRACWLRIDDWEKCKHRVVRTVEMSGCSPGDMSQGRLKIVADNVQRALHVNLQGLRD 1747

Query: 542  GNAV 553
            G+ V
Sbjct: 1748 GSGV 1751


>ref|XP_002531290.1| protein with unknown function [Ricinus communis]
            gi|223529123|gb|EEF31103.1| protein with unknown function
            [Ricinus communis]
          Length = 1746

 Score =  319 bits (818), Expect = 2e-85
 Identities = 148/181 (81%), Positives = 165/181 (91%)
 Frame = +2

Query: 2    LPISVLREFLKLIAWKKGLAQAQGGDIAPAQKSRIELCLENHSGLNTNGNSEYSSASKSN 181
            LPISVLREFLKLIAWKKG+ Q QGG+IAP QK RIELCLENH+GL+ N NSE SSA+KSN
Sbjct: 1557 LPISVLREFLKLIAWKKGMTQVQGGEIAPGQKPRIELCLENHAGLSENDNSENSSAAKSN 1616

Query: 182  IHYDRPHNSVDFGLTVVLDPTHIPHINAAGGAAWLPYCVSVRLRYSFGEKPTVSFLGMKG 361
            IHYDRPHNSVDF LTVVLDP  IPH+NAAGGAAWLPYCVSVRLRYSFGE   V+FLGM+G
Sbjct: 1617 IHYDRPHNSVDFALTVVLDPALIPHVNAAGGAAWLPYCVSVRLRYSFGENTNVTFLGMEG 1676

Query: 362  SHGGRACWLRLDDWEKCKQRVVRTMEMNGCSAGDLNQGRLRIIADSVQRTLHVCLQGLRD 541
            SHGGRACWLR+DDWEKCKQRV+RT+E+NG + GD+ QGRLR++ADSVQRTLH+CLQGLRD
Sbjct: 1677 SHGGRACWLRIDDWEKCKQRVIRTVEVNGSTTGDVAQGRLRMVADSVQRTLHMCLQGLRD 1736

Query: 542  G 544
            G
Sbjct: 1737 G 1737


>ref|XP_004171233.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            14-like, partial [Cucumis sativus]
          Length = 1332

 Score =  318 bits (815), Expect = 4e-85
 Identities = 151/184 (82%), Positives = 170/184 (92%)
 Frame = +2

Query: 2    LPISVLREFLKLIAWKKGLAQAQGGDIAPAQKSRIELCLENHSGLNTNGNSEYSSASKSN 181
            LPISVLREFLKLIAWKKG+AQAQGGDIAPAQK RIELCLENHSGL+T+ NSE S+ SKSN
Sbjct: 1142 LPISVLREFLKLIAWKKGVAQAQGGDIAPAQKPRIELCLENHSGLSTDENSERST-SKSN 1200

Query: 182  IHYDRPHNSVDFGLTVVLDPTHIPHINAAGGAAWLPYCVSVRLRYSFGEKPTVSFLGMKG 361
            IHYDR HNSVDF LTVVLDP HIPH+NAAGGAAWLPYCVSV+LRYSFGE   VSFLGM+G
Sbjct: 1201 IHYDRQHNSVDFALTVVLDPAHIPHMNAAGGAAWLPYCVSVKLRYSFGESLVVSFLGMEG 1260

Query: 362  SHGGRACWLRLDDWEKCKQRVVRTMEMNGCSAGDLNQGRLRIIADSVQRTLHVCLQGLRD 541
            SHGGRACWLR+DDWEKCKQRV RT+E++G S GD++QGRLRI+AD+VQRTLH+CLQGLR+
Sbjct: 1261 SHGGRACWLRVDDWEKCKQRVARTVEVSGSSTGDVSQGRLRIVADNVQRTLHMCLQGLRE 1320

Query: 542  GNAV 553
            G+ +
Sbjct: 1321 GSEI 1324


>ref|XP_004139381.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            14-like [Cucumis sativus]
          Length = 1800

 Score =  318 bits (815), Expect = 4e-85
 Identities = 151/184 (82%), Positives = 170/184 (92%)
 Frame = +2

Query: 2    LPISVLREFLKLIAWKKGLAQAQGGDIAPAQKSRIELCLENHSGLNTNGNSEYSSASKSN 181
            LPISVLREFLKLIAWKKG+AQAQGGDIAPAQK RIELCLENHSGL+T+ NSE S+ SKSN
Sbjct: 1610 LPISVLREFLKLIAWKKGVAQAQGGDIAPAQKPRIELCLENHSGLSTDENSERST-SKSN 1668

Query: 182  IHYDRPHNSVDFGLTVVLDPTHIPHINAAGGAAWLPYCVSVRLRYSFGEKPTVSFLGMKG 361
            IHYDR HNSVDF LTVVLDP HIPH+NAAGGAAWLPYCVSV+LRYSFGE   VSFLGM+G
Sbjct: 1669 IHYDRQHNSVDFALTVVLDPAHIPHMNAAGGAAWLPYCVSVKLRYSFGESLVVSFLGMEG 1728

Query: 362  SHGGRACWLRLDDWEKCKQRVVRTMEMNGCSAGDLNQGRLRIIADSVQRTLHVCLQGLRD 541
            SHGGRACWLR+DDWEKCKQRV RT+E++G S GD++QGRLRI+AD+VQRTLH+CLQGLR+
Sbjct: 1729 SHGGRACWLRVDDWEKCKQRVARTVEVSGSSTGDVSQGRLRIVADNVQRTLHMCLQGLRE 1788

Query: 542  GNAV 553
            G+ +
Sbjct: 1789 GSEI 1792


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