BLASTX nr result
ID: Panax21_contig00023892
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00023892 (557 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI34155.3| unnamed protein product [Vitis vinifera] 326 2e-87 ref|XP_002279923.1| PREDICTED: uncharacterized protein LOC100267... 326 2e-87 ref|XP_002531290.1| protein with unknown function [Ricinus commu... 319 2e-85 ref|XP_004171233.1| PREDICTED: mediator of RNA polymerase II tra... 318 4e-85 ref|XP_004139381.1| PREDICTED: mediator of RNA polymerase II tra... 318 4e-85 >emb|CBI34155.3| unnamed protein product [Vitis vinifera] Length = 1724 Score = 326 bits (835), Expect = 2e-87 Identities = 155/184 (84%), Positives = 168/184 (91%) Frame = +2 Query: 2 LPISVLREFLKLIAWKKGLAQAQGGDIAPAQKSRIELCLENHSGLNTNGNSEYSSASKSN 181 LPISVLREFLKLIAWKKGLAQAQGGD APAQK RIELCLENH+GL + +SE SS SKSN Sbjct: 1534 LPISVLREFLKLIAWKKGLAQAQGGDTAPAQKPRIELCLENHAGLKMDESSENSSTSKSN 1593 Query: 182 IHYDRPHNSVDFGLTVVLDPTHIPHINAAGGAAWLPYCVSVRLRYSFGEKPTVSFLGMKG 361 IHYDR HNSVDFGLTVVLDP HIPHINAAGGAAWLPYCVSVRLRYSFGE TVSFLGM+G Sbjct: 1594 IHYDRSHNSVDFGLTVVLDPAHIPHINAAGGAAWLPYCVSVRLRYSFGENSTVSFLGMEG 1653 Query: 362 SHGGRACWLRLDDWEKCKQRVVRTMEMNGCSAGDLNQGRLRIIADSVQRTLHVCLQGLRD 541 SHGGRACWLR+DDWEKCK RVVRT+EM+GCS GD++QGRL+I+AD+VQR LHV LQGLRD Sbjct: 1654 SHGGRACWLRIDDWEKCKHRVVRTVEMSGCSPGDMSQGRLKIVADNVQRALHVNLQGLRD 1713 Query: 542 GNAV 553 G+ V Sbjct: 1714 GSGV 1717 >ref|XP_002279923.1| PREDICTED: uncharacterized protein LOC100267561 [Vitis vinifera] Length = 1758 Score = 326 bits (835), Expect = 2e-87 Identities = 155/184 (84%), Positives = 168/184 (91%) Frame = +2 Query: 2 LPISVLREFLKLIAWKKGLAQAQGGDIAPAQKSRIELCLENHSGLNTNGNSEYSSASKSN 181 LPISVLREFLKLIAWKKGLAQAQGGD APAQK RIELCLENH+GL + +SE SS SKSN Sbjct: 1568 LPISVLREFLKLIAWKKGLAQAQGGDTAPAQKPRIELCLENHAGLKMDESSENSSTSKSN 1627 Query: 182 IHYDRPHNSVDFGLTVVLDPTHIPHINAAGGAAWLPYCVSVRLRYSFGEKPTVSFLGMKG 361 IHYDR HNSVDFGLTVVLDP HIPHINAAGGAAWLPYCVSVRLRYSFGE TVSFLGM+G Sbjct: 1628 IHYDRSHNSVDFGLTVVLDPAHIPHINAAGGAAWLPYCVSVRLRYSFGENSTVSFLGMEG 1687 Query: 362 SHGGRACWLRLDDWEKCKQRVVRTMEMNGCSAGDLNQGRLRIIADSVQRTLHVCLQGLRD 541 SHGGRACWLR+DDWEKCK RVVRT+EM+GCS GD++QGRL+I+AD+VQR LHV LQGLRD Sbjct: 1688 SHGGRACWLRIDDWEKCKHRVVRTVEMSGCSPGDMSQGRLKIVADNVQRALHVNLQGLRD 1747 Query: 542 GNAV 553 G+ V Sbjct: 1748 GSGV 1751 >ref|XP_002531290.1| protein with unknown function [Ricinus communis] gi|223529123|gb|EEF31103.1| protein with unknown function [Ricinus communis] Length = 1746 Score = 319 bits (818), Expect = 2e-85 Identities = 148/181 (81%), Positives = 165/181 (91%) Frame = +2 Query: 2 LPISVLREFLKLIAWKKGLAQAQGGDIAPAQKSRIELCLENHSGLNTNGNSEYSSASKSN 181 LPISVLREFLKLIAWKKG+ Q QGG+IAP QK RIELCLENH+GL+ N NSE SSA+KSN Sbjct: 1557 LPISVLREFLKLIAWKKGMTQVQGGEIAPGQKPRIELCLENHAGLSENDNSENSSAAKSN 1616 Query: 182 IHYDRPHNSVDFGLTVVLDPTHIPHINAAGGAAWLPYCVSVRLRYSFGEKPTVSFLGMKG 361 IHYDRPHNSVDF LTVVLDP IPH+NAAGGAAWLPYCVSVRLRYSFGE V+FLGM+G Sbjct: 1617 IHYDRPHNSVDFALTVVLDPALIPHVNAAGGAAWLPYCVSVRLRYSFGENTNVTFLGMEG 1676 Query: 362 SHGGRACWLRLDDWEKCKQRVVRTMEMNGCSAGDLNQGRLRIIADSVQRTLHVCLQGLRD 541 SHGGRACWLR+DDWEKCKQRV+RT+E+NG + GD+ QGRLR++ADSVQRTLH+CLQGLRD Sbjct: 1677 SHGGRACWLRIDDWEKCKQRVIRTVEVNGSTTGDVAQGRLRMVADSVQRTLHMCLQGLRD 1736 Query: 542 G 544 G Sbjct: 1737 G 1737 >ref|XP_004171233.1| PREDICTED: mediator of RNA polymerase II transcription subunit 14-like, partial [Cucumis sativus] Length = 1332 Score = 318 bits (815), Expect = 4e-85 Identities = 151/184 (82%), Positives = 170/184 (92%) Frame = +2 Query: 2 LPISVLREFLKLIAWKKGLAQAQGGDIAPAQKSRIELCLENHSGLNTNGNSEYSSASKSN 181 LPISVLREFLKLIAWKKG+AQAQGGDIAPAQK RIELCLENHSGL+T+ NSE S+ SKSN Sbjct: 1142 LPISVLREFLKLIAWKKGVAQAQGGDIAPAQKPRIELCLENHSGLSTDENSERST-SKSN 1200 Query: 182 IHYDRPHNSVDFGLTVVLDPTHIPHINAAGGAAWLPYCVSVRLRYSFGEKPTVSFLGMKG 361 IHYDR HNSVDF LTVVLDP HIPH+NAAGGAAWLPYCVSV+LRYSFGE VSFLGM+G Sbjct: 1201 IHYDRQHNSVDFALTVVLDPAHIPHMNAAGGAAWLPYCVSVKLRYSFGESLVVSFLGMEG 1260 Query: 362 SHGGRACWLRLDDWEKCKQRVVRTMEMNGCSAGDLNQGRLRIIADSVQRTLHVCLQGLRD 541 SHGGRACWLR+DDWEKCKQRV RT+E++G S GD++QGRLRI+AD+VQRTLH+CLQGLR+ Sbjct: 1261 SHGGRACWLRVDDWEKCKQRVARTVEVSGSSTGDVSQGRLRIVADNVQRTLHMCLQGLRE 1320 Query: 542 GNAV 553 G+ + Sbjct: 1321 GSEI 1324 >ref|XP_004139381.1| PREDICTED: mediator of RNA polymerase II transcription subunit 14-like [Cucumis sativus] Length = 1800 Score = 318 bits (815), Expect = 4e-85 Identities = 151/184 (82%), Positives = 170/184 (92%) Frame = +2 Query: 2 LPISVLREFLKLIAWKKGLAQAQGGDIAPAQKSRIELCLENHSGLNTNGNSEYSSASKSN 181 LPISVLREFLKLIAWKKG+AQAQGGDIAPAQK RIELCLENHSGL+T+ NSE S+ SKSN Sbjct: 1610 LPISVLREFLKLIAWKKGVAQAQGGDIAPAQKPRIELCLENHSGLSTDENSERST-SKSN 1668 Query: 182 IHYDRPHNSVDFGLTVVLDPTHIPHINAAGGAAWLPYCVSVRLRYSFGEKPTVSFLGMKG 361 IHYDR HNSVDF LTVVLDP HIPH+NAAGGAAWLPYCVSV+LRYSFGE VSFLGM+G Sbjct: 1669 IHYDRQHNSVDFALTVVLDPAHIPHMNAAGGAAWLPYCVSVKLRYSFGESLVVSFLGMEG 1728 Query: 362 SHGGRACWLRLDDWEKCKQRVVRTMEMNGCSAGDLNQGRLRIIADSVQRTLHVCLQGLRD 541 SHGGRACWLR+DDWEKCKQRV RT+E++G S GD++QGRLRI+AD+VQRTLH+CLQGLR+ Sbjct: 1729 SHGGRACWLRVDDWEKCKQRVARTVEVSGSSTGDVSQGRLRIVADNVQRTLHMCLQGLRE 1788 Query: 542 GNAV 553 G+ + Sbjct: 1789 GSEI 1792