BLASTX nr result
ID: Panax21_contig00023888
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00023888 (615 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002267100.2| PREDICTED: zinc finger CCCH domain-containin... 149 3e-34 emb|CBI17411.3| unnamed protein product [Vitis vinifera] 123 3e-26 ref|XP_002327676.1| predicted protein [Populus trichocarpa] gi|2... 99 5e-19 ref|XP_003516552.1| PREDICTED: zinc finger CCCH domain-containin... 98 1e-18 ref|XP_004164844.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger ... 97 3e-18 >ref|XP_002267100.2| PREDICTED: zinc finger CCCH domain-containing protein 44-like [Vitis vinifera] Length = 1643 Score = 149 bits (377), Expect = 3e-34 Identities = 92/203 (45%), Positives = 118/203 (58%), Gaps = 3/203 (1%) Frame = -1 Query: 606 KLWHYRDPNGKIQGPFCMVQLQKWSTTGYFPRDMRIW-AGDRQDDSILLTDALNGKFHKV 430 K+WHY+DP GKIQGPF MVQL+KWS G+FP +RIW ++QDDSILLTDA+N ++HK Sbjct: 943 KIWHYQDPAGKIQGPFGMVQLRKWSANGFFPPHLRIWRMNEKQDDSILLTDAMNLQYHKE 1002 Query: 429 LPLLNDISSQLREVGGASDGKIYNSDVGWGENVNVT-RDVKQTEGHWHGNIATVHSSSNN 253 PL N+ Q ++V S + N D G ++N T K EG + N AT+ S+ NN Sbjct: 1003 PPLQNNSLLQSQQVRVVSKDRENNWDGGLNGSMNATWIGNKLNEGPGNSNDATI-SNGNN 1061 Query: 252 KLVRSDRCGXXXXXXXXXXXSY-KKEIPAGSCSQEQDSFKGNSSCYNHLRVHSPLSSSTL 76 +LV+ D G KE+ GS SQ DS KGNSS + +V+S LSSSTL Sbjct: 1062 ELVKRDGWGSCSSSWSTPADIMNSKEVEIGSFSQGWDSLKGNSSWSDQPQVYSSLSSSTL 1121 Query: 75 SGKEFATFSHNEKNAEVRSNSDP 7 SGK F T H + DP Sbjct: 1122 SGKSFGTGLHQGREGHGVERWDP 1144 >emb|CBI17411.3| unnamed protein product [Vitis vinifera] Length = 1362 Score = 123 bits (308), Expect = 3e-26 Identities = 74/163 (45%), Positives = 97/163 (59%), Gaps = 3/163 (1%) Frame = -1 Query: 606 KLWHYRDPNGKIQGPFCMVQLQKWSTTGYFPRDMRIW-AGDRQDDSILLTDALNGKFHKV 430 K+WHY+DP GKIQGPF MVQL+KWS G+FP +RIW ++QDDSILLTDA+N ++HK Sbjct: 863 KIWHYQDPAGKIQGPFGMVQLRKWSANGFFPPHLRIWRMNEKQDDSILLTDAMNLQYHKE 922 Query: 429 LPLLNDISSQLREVGGASDGKIYNSDVGWGENVNVT-RDVKQTEGHWHGNIATVHSSSNN 253 PL N+ Q ++V S + N D G ++N T K EG + N AT+ S+ NN Sbjct: 923 PPLQNNSLLQSQQVRVVSKDRENNWDGGLNGSMNATWIGNKLNEGPGNSNDATI-SNGNN 981 Query: 252 KLVRSDRCGXXXXXXXXXXXSY-KKEIPAGSCSQEQDSFKGNS 127 +LV+ D G KE+ GS SQ DS KGN+ Sbjct: 982 ELVKRDGWGSCSSSWSTPADIMNSKEVEIGSFSQGWDSLKGNT 1024 >ref|XP_002327676.1| predicted protein [Populus trichocarpa] gi|222836761|gb|EEE75154.1| predicted protein [Populus trichocarpa] Length = 825 Score = 99.4 bits (246), Expect = 5e-19 Identities = 51/127 (40%), Positives = 77/127 (60%), Gaps = 3/127 (2%) Frame = -1 Query: 606 KLWHYRDPNGKIQGPFCMVQLQKWSTTGYFPRDMRIW-AGDRQDDSILLTDALNGKFHKV 430 KLWHY+DP GK QGPF M QL+KWST+G FP D+R+W ++ DDSILLT+AL G+FHK Sbjct: 439 KLWHYQDPTGKTQGPFAMAQLRKWSTSGLFPHDLRVWKINEKPDDSILLTNALVGRFHKE 498 Query: 429 LPLLNDISSQLREVGGASDGKIYNSDVGWGENVNVTRDVKQTEGHWHG--NIATVHSSSN 256 P L+ S L + S K + G +N++ + + +W N A+ + + + Sbjct: 499 -PALSHNRSSLAQEATVSSDKDKMHEFGMNQNIDAVQLDNKNINNWKSVQNNASANCNDD 557 Query: 255 NKLVRSD 235 ++ + S+ Sbjct: 558 DEFLGSN 564 >ref|XP_003516552.1| PREDICTED: zinc finger CCCH domain-containing protein 44-like [Glycine max] Length = 1953 Score = 97.8 bits (242), Expect = 1e-18 Identities = 66/191 (34%), Positives = 95/191 (49%), Gaps = 11/191 (5%) Frame = -1 Query: 606 KLWHYRDPNGKIQGPFCMVQLQKWSTTGYFPRDMRIWAGDR-QDDSILLTDALNGKFHKV 430 K WHY+DP GK+QGPF ++QL KW+ GYFP D+RIW D Q++SI LTD LNGK K Sbjct: 1560 KPWHYQDPTGKVQGPFSLLQLYKWNACGYFPSDLRIWRVDETQNNSIFLTDVLNGKCSKN 1619 Query: 429 LPLLNDISSQLREVGGASDGKIYNSDVGWGENVNVTRD--------VKQTEGHWHGNIAT 274 + L N+ + K + D G EN N TR+ V+Q + +A Sbjct: 1620 VSLPNNSQQLSLGTNSTLENKENSQDGGENEN-NATRNGNSANHQIVEQCD---EQKVAD 1675 Query: 273 VHSSSNNK--LVRSDRCGXXXXXXXXXXXSYKKEIPAGSCSQEQDSFKGNSSCYNHLRVH 100 ++ SN K VRS+ E +G+ + ++S K SC++ V+ Sbjct: 1676 TYTQSNGKDESVRSNGWNSQSPGLTIQADGNNNEGQSGNSERMEESPKCEISCHDIPHVY 1735 Query: 99 SPLSSSTLSGK 67 + L S+ S K Sbjct: 1736 TSLPSTAFSEK 1746 Score = 89.7 bits (221), Expect = 4e-16 Identities = 48/98 (48%), Positives = 64/98 (65%), Gaps = 3/98 (3%) Frame = -1 Query: 600 WHYRDPNGKIQGPFCMVQLQKWSTTGYFPRDMRIW-AGDRQDDSILLTDALNGKFHKVLP 424 WHY+DP GKIQGPF M+QL KW+ +G FP D+RIW G++QD+SILLTDAL+GK K + Sbjct: 748 WHYQDPTGKIQGPFSMLQLYKWNASGCFPPDLRIWRVGEKQDNSILLTDALSGKCSKNVS 807 Query: 423 LLNDISSQLREVGGA--SDGKIYNSDVGWGENVNVTRD 316 L +SQL +G + D K + D G ++ D Sbjct: 808 L--PFNSQLLSLGVSVTLDNKDNSQDAGKNGKNEISAD 843 >ref|XP_004164844.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger CCCH domain-containing protein 19-like [Cucumis sativus] Length = 1475 Score = 96.7 bits (239), Expect = 3e-18 Identities = 42/66 (63%), Positives = 53/66 (80%), Gaps = 1/66 (1%) Frame = -1 Query: 606 KLWHYRDPNGKIQGPFCMVQLQKWSTTGYFPRDMRIW-AGDRQDDSILLTDALNGKFHKV 430 K+WHY+DP+GK+QGPF MVQL+KWS TGYFP D+RIW D+Q+DS+LLTD L GK K Sbjct: 893 KIWHYQDPSGKVQGPFSMVQLRKWSNTGYFPTDLRIWRISDQQEDSLLLTDVLAGKISKD 952 Query: 429 LPLLND 412 PL ++ Sbjct: 953 TPLTSN 958