BLASTX nr result

ID: Panax21_contig00023872 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00023872
         (404 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK92751.1| unknown [Populus trichocarpa]                           63   3e-08
ref|XP_002527636.1| conserved hypothetical protein [Ricinus comm...    62   6e-08
ref|XP_002279170.2| PREDICTED: uncharacterized protein LOC100245...    61   8e-08
emb|CBI33948.3| unnamed protein product [Vitis vinifera]               61   8e-08
gb|AFK40219.1| unknown [Lotus japonicus]                               60   1e-07

>gb|ABK92751.1| unknown [Populus trichocarpa]
          Length = 280

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 28/30 (93%), Positives = 29/30 (96%)
 Frame = +3

Query: 315 PVPATGVPVAGTLDQRPSRSDAWSTRMREK 404
           P PATGVPVAGTLDQRPSR+DAWSTRMREK
Sbjct: 216 PAPATGVPVAGTLDQRPSRNDAWSTRMREK 245



 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 24/30 (80%), Positives = 28/30 (93%)
 Frame = +1

Query: 1   EIPTDKTGDFDMIYEFLEDNWKIVKWVALG 90
           EIPTDKTGDFDM+Y+FL++ W IVKWVALG
Sbjct: 141 EIPTDKTGDFDMLYDFLKEKWNIVKWVALG 170


>ref|XP_002527636.1| conserved hypothetical protein [Ricinus communis]
           gi|223532941|gb|EEF34707.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 280

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 28/30 (93%), Positives = 29/30 (96%)
 Frame = +3

Query: 315 PVPATGVPVAGTLDQRPSRSDAWSTRMREK 404
           P PATGVPVAGTLDQRPSR+DAWSTRMREK
Sbjct: 216 PGPATGVPVAGTLDQRPSRNDAWSTRMREK 245



 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 25/30 (83%), Positives = 29/30 (96%)
 Frame = +1

Query: 1   EIPTDKTGDFDMIYEFLEDNWKIVKWVALG 90
           EIPTDKTGDFDMIY+FL++ WKIV+WVALG
Sbjct: 141 EIPTDKTGDFDMIYDFLKEKWKIVRWVALG 170


>ref|XP_002279170.2| PREDICTED: uncharacterized protein LOC100245417 [Vitis vinifera]
          Length = 280

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 25/29 (86%), Positives = 29/29 (100%)
 Frame = +1

Query: 1   EIPTDKTGDFDMIYEFLEDNWKIVKWVAL 87
           +IPTDKTGDFDMIY+FL++NWKIVKWVAL
Sbjct: 141 DIPTDKTGDFDMIYDFLKENWKIVKWVAL 169



 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 26/30 (86%), Positives = 28/30 (93%)
 Frame = +3

Query: 315 PVPATGVPVAGTLDQRPSRSDAWSTRMREK 404
           PV ATGVPVAG +DQRPSR+DAWSTRMREK
Sbjct: 216 PVAATGVPVAGAIDQRPSRNDAWSTRMREK 245


>emb|CBI33948.3| unnamed protein product [Vitis vinifera]
          Length = 217

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 25/29 (86%), Positives = 29/29 (100%)
 Frame = +1

Query: 1   EIPTDKTGDFDMIYEFLEDNWKIVKWVAL 87
           +IPTDKTGDFDMIY+FL++NWKIVKWVAL
Sbjct: 78  DIPTDKTGDFDMIYDFLKENWKIVKWVAL 106



 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 26/30 (86%), Positives = 28/30 (93%)
 Frame = +3

Query: 315 PVPATGVPVAGTLDQRPSRSDAWSTRMREK 404
           PV ATGVPVAG +DQRPSR+DAWSTRMREK
Sbjct: 153 PVAATGVPVAGAIDQRPSRNDAWSTRMREK 182


>gb|AFK40219.1| unknown [Lotus japonicus]
          Length = 282

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 25/30 (83%), Positives = 28/30 (93%)
 Frame = +1

Query: 1   EIPTDKTGDFDMIYEFLEDNWKIVKWVALG 90
           EIPTDKTG+FDMIYEFL +NW IV+WVALG
Sbjct: 143 EIPTDKTGNFDMIYEFLRENWNIVRWVALG 172



 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 25/28 (89%), Positives = 28/28 (100%)
 Frame = +3

Query: 321 PATGVPVAGTLDQRPSRSDAWSTRMREK 404
           PA+GVPVAGT+DQRPSR+DAWSTRMREK
Sbjct: 220 PASGVPVAGTIDQRPSRNDAWSTRMREK 247


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