BLASTX nr result

ID: Panax21_contig00023857 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00023857
         (353 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFQ94050.1| auxin response factor 1 [Camellia sinensis]            159   3e-37
gb|AFF60411.1| auxin response factor 8 [Nicotiana tabacum]            150   1e-34
ref|XP_002266678.2| PREDICTED: auxin response factor 8-like [Vit...   149   2e-34
ref|XP_002305917.1| predicted protein [Populus trichocarpa] gi|2...   145   4e-33
gb|ABK95913.1| unknown [Populus trichocarpa]                          145   4e-33

>gb|AFQ94050.1| auxin response factor 1 [Camellia sinensis]
          Length = 820

 Score =  159 bits (401), Expect = 3e-37
 Identities = 82/113 (72%), Positives = 92/113 (81%)
 Frame = -1

Query: 341 ALFGSNMDXXXXXXXXXXXXXXXXVDADIPSMPLGASGFQSSLYGFMQDSSELLHSAGQV 162
           ALFG+N+D                V+AD+ SMPLGASGFQSSLYG MQDSSELLHSA QV
Sbjct: 645 ALFGANIDPGLLLPTTLSSIGTSSVNADVSSMPLGASGFQSSLYGCMQDSSELLHSAAQV 704

Query: 161 DPPTPSSTFVKVYKSGSVGRSLDITRFNSYHELREELGRMFGIEGLLEDPQRS 3
           DPPT + TFVKVYKSGSVGRSLDI+RF+SY+ELREELG+MFGIEGLL+DPQRS
Sbjct: 705 DPPTANRTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGLLKDPQRS 757


>gb|AFF60411.1| auxin response factor 8 [Nicotiana tabacum]
          Length = 843

 Score =  150 bits (378), Expect = 1e-34
 Identities = 77/118 (65%), Positives = 89/118 (75%), Gaps = 1/118 (0%)
 Frame = -1

Query: 353 AHGQALFGSNMDXXXXXXXXXXXXXXXXV-DADIPSMPLGASGFQSSLYGFMQDSSELLH 177
           A  Q LFG+N+D                  DAD+ +MPLG SGFQ+SLYG++QDSS+LLH
Sbjct: 646 AQNQTLFGANVDSSGLLLPTTVSNVSTTPIDADMSTMPLGTSGFQNSLYGYVQDSSDLLH 705

Query: 176 SAGQVDPPTPSSTFVKVYKSGSVGRSLDITRFNSYHELREELGRMFGIEGLLEDPQRS 3
           +AGQVD    + TFVKVYKSGSVGRSLDITRFNSYHELR+ELG+MFGIEG LEDPQRS
Sbjct: 706 NAGQVDSLNATRTFVKVYKSGSVGRSLDITRFNSYHELRQELGQMFGIEGFLEDPQRS 763


>ref|XP_002266678.2| PREDICTED: auxin response factor 8-like [Vitis vinifera]
          Length = 846

 Score =  149 bits (377), Expect = 2e-34
 Identities = 79/118 (66%), Positives = 87/118 (73%), Gaps = 1/118 (0%)
 Frame = -1

Query: 353  AHGQALFGSNMDXXXXXXXXXXXXXXXXV-DADIPSMPLGASGFQSSLYGFMQDSSELLH 177
            A    LFG N+D                  DAD+ SMPLGASGFQ SL+G +QD SELL 
Sbjct: 648  AQNHTLFGVNIDSSGLLLPTTVPSFGSSSVDADVSSMPLGASGFQGSLFGCVQDPSELLQ 707

Query: 176  SAGQVDPPTPSSTFVKVYKSGSVGRSLDITRFNSYHELREELGRMFGIEGLLEDPQRS 3
            +AGQVDPPTPS TFVKVYKSGSVGRSLDITRF+SYHELREELG+MFGIEG LE+P RS
Sbjct: 708  NAGQVDPPTPSRTFVKVYKSGSVGRSLDITRFSSYHELREELGQMFGIEGKLENPLRS 765


>ref|XP_002305917.1| predicted protein [Populus trichocarpa] gi|222848881|gb|EEE86428.1|
            predicted protein [Populus trichocarpa]
          Length = 827

 Score =  145 bits (365), Expect = 4e-33
 Identities = 76/118 (64%), Positives = 87/118 (73%), Gaps = 1/118 (0%)
 Frame = -1

Query: 353  AHGQALFGSNMDXXXXXXXXXXXXXXXXV-DADIPSMPLGASGFQSSLYGFMQDSSELLH 177
            A    LFG+N+D                  DAD+ SMPLG SGFQ+SLYG +QDSSELL 
Sbjct: 647  AQNPTLFGANIDSSGLLLPTTVPRYSTSSIDADVSSMPLGDSGFQNSLYGCVQDSSELLS 706

Query: 176  SAGQVDPPTPSSTFVKVYKSGSVGRSLDITRFNSYHELREELGRMFGIEGLLEDPQRS 3
            +AGQ+DPPTPS TFVKVYKSGSVGRSLDI+RF+SYHELR EL +MFGIEG LE+P RS
Sbjct: 707  NAGQMDPPTPSGTFVKVYKSGSVGRSLDISRFSSYHELRGELAQMFGIEGKLENPHRS 764


>gb|ABK95913.1| unknown [Populus trichocarpa]
          Length = 533

 Score =  145 bits (365), Expect = 4e-33
 Identities = 76/118 (64%), Positives = 87/118 (73%), Gaps = 1/118 (0%)
 Frame = -1

Query: 353 AHGQALFGSNMDXXXXXXXXXXXXXXXXV-DADIPSMPLGASGFQSSLYGFMQDSSELLH 177
           A    LFG+N+D                  DAD+ SMPLG SGFQ+SLYG +QDSSELL 
Sbjct: 353 AQNPTLFGANIDSSGLLLPTTVPRYSTSSIDADVSSMPLGDSGFQNSLYGCVQDSSELLS 412

Query: 176 SAGQVDPPTPSSTFVKVYKSGSVGRSLDITRFNSYHELREELGRMFGIEGLLEDPQRS 3
           +AGQ+DPPTPS TFVKVYKSGSVGRSLDI+RF+SYHELR EL +MFGIEG LE+P RS
Sbjct: 413 NAGQMDPPTPSGTFVKVYKSGSVGRSLDISRFSSYHELRGELAQMFGIEGKLENPHRS 470


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