BLASTX nr result

ID: Panax21_contig00023834 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00023834
         (538 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19375.3| unnamed protein product [Vitis vinifera]               63   3e-08
ref|XP_002285420.1| PREDICTED: U-box domain-containing protein 3...    63   3e-08
emb|CAN70370.1| hypothetical protein VITISV_035398 [Vitis vinifera]    63   3e-08
ref|XP_002510071.1| E3 ubiquitin ligase PUB14, putative [Ricinus...    57   1e-06
ref|XP_002330821.1| predicted protein [Populus trichocarpa] gi|2...    56   3e-06

>emb|CBI19375.3| unnamed protein product [Vitis vinifera]
          Length = 185

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 37/73 (50%), Positives = 44/73 (60%), Gaps = 7/73 (9%)
 Frame = +3

Query: 339 MPIYQPSGRK------FEMGG-GGTVLDLETXXXXXXXXXXXXXXXXXXXXEKLDLKKMV 497
           MP+YQPSGR+      +++GG GG VLDLET                    EKLDLKKM+
Sbjct: 1   MPMYQPSGRRRDGGVMYDVGGDGGHVLDLETAVKDGILGGGGGVVCGSGVTEKLDLKKMI 60

Query: 498 EGLDSIEVPSVFI 536
           E LDSI+VPSVFI
Sbjct: 61  EDLDSIDVPSVFI 73


>ref|XP_002285420.1| PREDICTED: U-box domain-containing protein 30 [Vitis vinifera]
          Length = 452

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 37/73 (50%), Positives = 44/73 (60%), Gaps = 7/73 (9%)
 Frame = +3

Query: 339 MPIYQPSGRK------FEMGG-GGTVLDLETXXXXXXXXXXXXXXXXXXXXEKLDLKKMV 497
           MP+YQPSGR+      +++GG GG VLDLET                    EKLDLKKM+
Sbjct: 1   MPMYQPSGRRRDGGVMYDVGGDGGHVLDLETAVKDGILGGGGGVVCGSGVTEKLDLKKMI 60

Query: 498 EGLDSIEVPSVFI 536
           E LDSI+VPSVFI
Sbjct: 61  EDLDSIDVPSVFI 73


>emb|CAN70370.1| hypothetical protein VITISV_035398 [Vitis vinifera]
          Length = 417

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 37/73 (50%), Positives = 44/73 (60%), Gaps = 7/73 (9%)
 Frame = +3

Query: 339 MPIYQPSGRK------FEMGG-GGTVLDLETXXXXXXXXXXXXXXXXXXXXEKLDLKKMV 497
           MP+YQPSGR+      +++GG GG VLDLET                    EKLDLKKM+
Sbjct: 1   MPMYQPSGRRRDGGVMYDVGGDGGHVLDLETAVKDGILGGGGGVVCGSGVTEKLDLKKMI 60

Query: 498 EGLDSIEVPSVFI 536
           E LDSI+VPSVFI
Sbjct: 61  EDLDSIDVPSVFI 73


>ref|XP_002510071.1| E3 ubiquitin ligase PUB14, putative [Ricinus communis]
           gi|223550772|gb|EEF52258.1| E3 ubiquitin ligase PUB14,
           putative [Ricinus communis]
          Length = 451

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 32/72 (44%), Positives = 40/72 (55%), Gaps = 6/72 (8%)
 Frame = +3

Query: 339 MPIYQPSGR------KFEMGGGGTVLDLETXXXXXXXXXXXXXXXXXXXXEKLDLKKMVE 500
           MP+YQP+        K ++G GG VLDLET                    EKLDLKKM+E
Sbjct: 1   MPMYQPNSHRREGNMKLDVGSGGQVLDLETAVKDGILGGSGGGLISTAGVEKLDLKKMIE 60

Query: 501 GLDSIEVPSVFI 536
            L+S++VPSVFI
Sbjct: 61  ELESLDVPSVFI 72


>ref|XP_002330821.1| predicted protein [Populus trichocarpa] gi|222872623|gb|EEF09754.1|
           predicted protein [Populus trichocarpa]
          Length = 448

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 32/69 (46%), Positives = 39/69 (56%), Gaps = 3/69 (4%)
 Frame = +3

Query: 339 MPIYQPSGR---KFEMGGGGTVLDLETXXXXXXXXXXXXXXXXXXXXEKLDLKKMVEGLD 509
           MP+YQP+     K +MG GG VLDL+T                    EKLDL+KMV  L+
Sbjct: 1   MPMYQPNSHGNVKLDMGSGGQVLDLQTTIKGGILGGVGGGLVCTGVKEKLDLRKMVGELE 60

Query: 510 SIEVPSVFI 536
           SI+VPSVFI
Sbjct: 61  SIQVPSVFI 69


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