BLASTX nr result

ID: Panax21_contig00023799 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00023799
         (1239 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277389.1| PREDICTED: DNA-(apurinic or apyrimidinic sit...   589   e-166
ref|XP_002321664.1| predicted protein [Populus trichocarpa] gi|2...   587   e-165
ref|XP_004157772.1| PREDICTED: LOW QUALITY PROTEIN: DNA-(apurini...   565   e-159
ref|XP_004152506.1| PREDICTED: DNA-(apurinic or apyrimidinic sit...   565   e-158
ref|XP_003523126.1| PREDICTED: exodeoxyribonuclease-like [Glycin...   557   e-156

>ref|XP_002277389.1| PREDICTED: DNA-(apurinic or apyrimidinic site) lyase [Vitis vinifera]
            gi|297733638|emb|CBI14885.3| unnamed protein product
            [Vitis vinifera]
          Length = 357

 Score =  589 bits (1519), Expect = e-166
 Identities = 277/348 (79%), Positives = 311/348 (89%)
 Frame = +2

Query: 194  FFQPVEKDGSSKKPTICSVKIDKEAAQTTPPDDGANKTTEPLKFLTWNANSFLLRVKNNW 373
            +FQP+ KDGSSKKP++     D+   Q +  +       EPLKFLTWNANSFL+RVKNNW
Sbjct: 4    YFQPIGKDGSSKKPSLSKEDGDENTDQVSEEEK-----KEPLKFLTWNANSFLIRVKNNW 58

Query: 374  PEFTKFVETLDPDVIAIQEVRMPAAGTKGSTKNPRELKDDTSTSREEKKILMRAISSAPL 553
            PEFTKFV  LDPDVIA+QEVRMPAAG+KG+ KN  ELKDDTS+SREEKKILM A+S  P 
Sbjct: 59   PEFTKFVSDLDPDVIAVQEVRMPAAGSKGAPKNHGELKDDTSSSREEKKILMHALSRPPF 118

Query: 554  GNYNVWWSLSDTKYAGTALFVKKCFQPKKVSFSLDRTASKHESDGRVILAEFESFRLLNT 733
            GNY VWWSL+D+KYAGTALFVKKCFQPKKVSFS+D+ ASKHE +GRVILAEFESFRLLNT
Sbjct: 119  GNYRVWWSLADSKYAGTALFVKKCFQPKKVSFSIDQKASKHEPEGRVILAEFESFRLLNT 178

Query: 734  YVPNNGWKDEETSFQRRRKWDKRILDFVMQTSDKPLIWCGDLNVSHEEVDVSHPEFFSSA 913
            YVPNNGWKDEETSFQRRRKWDKR+L+FV+Q+SDKPLIWCGDLNVSHEE+DVSHPEFFS+A
Sbjct: 179  YVPNNGWKDEETSFQRRRKWDKRMLEFVVQSSDKPLIWCGDLNVSHEEIDVSHPEFFSAA 238

Query: 914  KLNGYIPPNKEDCGQPGFTLSERKRFGAILKEGKLIDAYRSLHEDKDMERGFSWSGNPVG 1093
            K NGY+PPNKEDCGQPGFTL+ER+RFG ILKEGKL+DAYR LH++KDME GFSWSGNP+G
Sbjct: 239  KHNGYVPPNKEDCGQPGFTLAERRRFGGILKEGKLVDAYRLLHKEKDMEGGFSWSGNPIG 298

Query: 1094 KYRGKRMRIDYFIVSEKLKNRIVACEMHGQGIELQGFYGSDHCPVSLE 1237
            KYRGKRMRIDYFIV E LK+RIVACE+HGQGIEL+GFYGSDHCPVSLE
Sbjct: 299  KYRGKRMRIDYFIVPEALKDRIVACEIHGQGIELKGFYGSDHCPVSLE 346


>ref|XP_002321664.1| predicted protein [Populus trichocarpa] gi|222868660|gb|EEF05791.1|
            predicted protein [Populus trichocarpa]
          Length = 366

 Score =  587 bits (1514), Expect = e-165
 Identities = 273/352 (77%), Positives = 315/352 (89%), Gaps = 4/352 (1%)
 Frame = +2

Query: 194  FFQPVEKDGSSKKPTICSVKIDKEAAQTTPPDD----GANKTTEPLKFLTWNANSFLLRV 361
            FF+P+EKDGS+KKPT+ + + D E  + +  ++    G     EPLKF+TWNANS LLRV
Sbjct: 4    FFKPIEKDGSAKKPTLSTNQEDNEKKEASESEETNNNGNTMKKEPLKFITWNANSLLLRV 63

Query: 362  KNNWPEFTKFVETLDPDVIAIQEVRMPAAGTKGSTKNPRELKDDTSTSREEKKILMRAIS 541
            KNNWP F+KFV  +DPDVI IQEVRMPAAG+KG+ KN  E+KDDT++SREEKKILMRA+S
Sbjct: 64   KNNWPGFSKFVSDIDPDVIVIQEVRMPAAGSKGAPKNSGEIKDDTNSSREEKKILMRALS 123

Query: 542  SAPLGNYNVWWSLSDTKYAGTALFVKKCFQPKKVSFSLDRTASKHESDGRVILAEFESFR 721
            S+P GNYNVWWSL+D+KYAGTAL VKKCFQP KVSF+LD+TASKHE DGRVILAEF++FR
Sbjct: 124  SSPFGNYNVWWSLADSKYAGTALLVKKCFQPVKVSFALDQTASKHEPDGRVILAEFKTFR 183

Query: 722  LLNTYVPNNGWKDEETSFQRRRKWDKRILDFVMQTSDKPLIWCGDLNVSHEEVDVSHPEF 901
            LLNTY PNNGWK+EE SFQRRRKWDKR+L+ V+Q SDKPLIWCGDLNVSHEE+DVSHPEF
Sbjct: 184  LLNTYAPNNGWKEEEKSFQRRRKWDKRMLEVVVQLSDKPLIWCGDLNVSHEEIDVSHPEF 243

Query: 902  FSSAKLNGYIPPNKEDCGQPGFTLSERKRFGAILKEGKLIDAYRSLHEDKDMERGFSWSG 1081
            FS+AK+NGY+PPNKEDCGQPGFTLSERKRFGAILKEGKLIDAYR LH+++DMERGFSWSG
Sbjct: 244  FSAAKVNGYVPPNKEDCGQPGFTLSERKRFGAILKEGKLIDAYRFLHKERDMERGFSWSG 303

Query: 1082 NPVGKYRGKRMRIDYFIVSEKLKNRIVACEMHGQGIELQGFYGSDHCPVSLE 1237
            NP+GKYRGKRMRID+FIVSEKLK+RI+ CEMHG GIEL+GFYGSDHCPVSLE
Sbjct: 304  NPIGKYRGKRMRIDFFIVSEKLKDRIIQCEMHGHGIELEGFYGSDHCPVSLE 355


>ref|XP_004157772.1| PREDICTED: LOW QUALITY PROTEIN: DNA-(apurinic or apyrimidinic site)
            lyase-like [Cucumis sativus]
          Length = 361

 Score =  565 bits (1456), Expect = e-159
 Identities = 270/350 (77%), Positives = 310/350 (88%), Gaps = 2/350 (0%)
 Frame = +2

Query: 194  FFQPVEKDGSSKKPTIC-SVKI-DKEAAQTTPPDDGANKTTEPLKFLTWNANSFLLRVKN 367
            FF+P+EK+GSSKK  +  S+K  D   ++ + PD       EPLKF+TWNANS LLRVKN
Sbjct: 4    FFKPIEKEGSSKKVALSPSLKDGDDGDSEASVPDK-----KEPLKFVTWNANSLLLRVKN 58

Query: 368  NWPEFTKFVETLDPDVIAIQEVRMPAAGTKGSTKNPRELKDDTSTSREEKKILMRAISSA 547
            +W EFTKFV  LDPD IAIQEVR+PAAG+KG++KN  ELKDDT+TSREEK++LMRA+SS 
Sbjct: 59   DWSEFTKFVTNLDPDAIAIQEVRIPAAGSKGASKNQGELKDDTNTSREEKQMLMRALSSP 118

Query: 548  PLGNYNVWWSLSDTKYAGTALFVKKCFQPKKVSFSLDRTASKHESDGRVILAEFESFRLL 727
            P  NY VWWSLSD+KYAGTALF+KKCFQPKKV F+LDR ASKHE DGRVILAEFE+FRLL
Sbjct: 119  PFANYRVWWSLSDSKYAGTALFIKKCFQPKKVXFNLDRIASKHEVDGRVILAEFETFRLL 178

Query: 728  NTYVPNNGWKDEETSFQRRRKWDKRILDFVMQTSDKPLIWCGDLNVSHEEVDVSHPEFFS 907
            NTY PNNGWK+EE SF+RRRKWDKR+L+FV+Q+SDKPLIWCGDLNVSHEE+DVSHP+FFS
Sbjct: 179  NTYSPNNGWKEEEKSFKRRRKWDKRMLEFVIQSSDKPLIWCGDLNVSHEEIDVSHPDFFS 238

Query: 908  SAKLNGYIPPNKEDCGQPGFTLSERKRFGAILKEGKLIDAYRSLHEDKDMERGFSWSGNP 1087
            +AKLNGYIPPNKEDCGQPGFTL+ER RF AILKEGKLIDA+R LH++KDMERGFSWSG+P
Sbjct: 239  AAKLNGYIPPNKEDCGQPGFTLAERNRFNAILKEGKLIDAHRFLHKEKDMERGFSWSGHP 298

Query: 1088 VGKYRGKRMRIDYFIVSEKLKNRIVACEMHGQGIELQGFYGSDHCPVSLE 1237
            +GKYRGKRMRIDYF+VSE L  RIV+CEMHGQGIEL+GFYGSDHCPVSLE
Sbjct: 299  IGKYRGKRMRIDYFLVSESLVGRIVSCEMHGQGIELKGFYGSDHCPVSLE 348


>ref|XP_004152506.1| PREDICTED: DNA-(apurinic or apyrimidinic site) lyase-like [Cucumis
            sativus]
          Length = 361

 Score =  565 bits (1455), Expect = e-158
 Identities = 270/350 (77%), Positives = 310/350 (88%), Gaps = 2/350 (0%)
 Frame = +2

Query: 194  FFQPVEKDGSSKKPTIC-SVKI-DKEAAQTTPPDDGANKTTEPLKFLTWNANSFLLRVKN 367
            FF+P+EK+GSSKK  +  S+K  D   ++ + PD       EPLKF+TWNANS LLRVKN
Sbjct: 4    FFKPIEKEGSSKKVALSPSLKDGDDGDSEASVPDK-----KEPLKFVTWNANSLLLRVKN 58

Query: 368  NWPEFTKFVETLDPDVIAIQEVRMPAAGTKGSTKNPRELKDDTSTSREEKKILMRAISSA 547
            +W EFTKFV  LDPD IAIQEVR+PAAG+KG++KN  ELKDDT+TSREEK++LMRA+SS 
Sbjct: 59   DWSEFTKFVTNLDPDAIAIQEVRIPAAGSKGASKNQGELKDDTNTSREEKQMLMRALSSP 118

Query: 548  PLGNYNVWWSLSDTKYAGTALFVKKCFQPKKVSFSLDRTASKHESDGRVILAEFESFRLL 727
            P  NY VWWSLSD+KYAGTALF+KKCFQPKKV F+LDR ASKHE DGRVILAEFE+FRLL
Sbjct: 119  PFANYRVWWSLSDSKYAGTALFIKKCFQPKKVFFNLDRIASKHEVDGRVILAEFETFRLL 178

Query: 728  NTYVPNNGWKDEETSFQRRRKWDKRILDFVMQTSDKPLIWCGDLNVSHEEVDVSHPEFFS 907
            NTY PNNGWK+EE SF+RRRKWDKR+L+FV+Q+SDKPLIWCGDLNVSHEE+DVSHP+FFS
Sbjct: 179  NTYSPNNGWKEEEKSFKRRRKWDKRMLEFVIQSSDKPLIWCGDLNVSHEEIDVSHPDFFS 238

Query: 908  SAKLNGYIPPNKEDCGQPGFTLSERKRFGAILKEGKLIDAYRSLHEDKDMERGFSWSGNP 1087
            +AKLNGYIPPNKEDCGQPGFTL+ER RF AILKEGKLIDA+R LH++KDMERGFSWSG+P
Sbjct: 239  AAKLNGYIPPNKEDCGQPGFTLAERNRFNAILKEGKLIDAHRFLHKEKDMERGFSWSGHP 298

Query: 1088 VGKYRGKRMRIDYFIVSEKLKNRIVACEMHGQGIELQGFYGSDHCPVSLE 1237
            +GKYRGKRMRIDYF+VSE L  RIV+CEMHGQGIEL+GFYGSDHCPVSLE
Sbjct: 299  IGKYRGKRMRIDYFLVSESLVGRIVSCEMHGQGIELKGFYGSDHCPVSLE 348


>ref|XP_003523126.1| PREDICTED: exodeoxyribonuclease-like [Glycine max]
          Length = 355

 Score =  557 bits (1436), Expect = e-156
 Identities = 267/350 (76%), Positives = 300/350 (85%), Gaps = 2/350 (0%)
 Frame = +2

Query: 194  FFQPVEKD--GSSKKPTICSVKIDKEAAQTTPPDDGANKTTEPLKFLTWNANSFLLRVKN 367
            FF+ VEKD  GS KKP     + D EA ++       N+  EPLKF+TWNANSFLLRVKN
Sbjct: 4    FFKVVEKDSDGSVKKPR----ENDSEAEES-------NEKKEPLKFMTWNANSFLLRVKN 52

Query: 368  NWPEFTKFVETLDPDVIAIQEVRMPAAGTKGSTKNPRELKDDTSTSREEKKILMRAISSA 547
            NWP+FT  + T DPD+IAIQEVRMPAAG KG++K   E+KDDTS +REEKKIL RA+S+ 
Sbjct: 53   NWPDFTNLITTFDPDLIAIQEVRMPAAGAKGASKIQGEIKDDTSAAREEKKILTRALSAP 112

Query: 548  PLGNYNVWWSLSDTKYAGTALFVKKCFQPKKVSFSLDRTASKHESDGRVILAEFESFRLL 727
            P GNY+VWWSL+D+KYAGTAL VKKCF+PK V F+LD+ ASKHE DGRVIL EFE+ RLL
Sbjct: 113  PFGNYHVWWSLADSKYAGTALLVKKCFKPKSVVFNLDKLASKHEPDGRVILVEFETLRLL 172

Query: 728  NTYVPNNGWKDEETSFQRRRKWDKRILDFVMQTSDKPLIWCGDLNVSHEEVDVSHPEFFS 907
            NTYVPNNGWK+E  SFQRRRKWDKRIL+FV Q+SDKPLIWCGDLNVSHEE+DVSHP+FFS
Sbjct: 173  NTYVPNNGWKEEANSFQRRRKWDKRILEFVTQSSDKPLIWCGDLNVSHEEIDVSHPDFFS 232

Query: 908  SAKLNGYIPPNKEDCGQPGFTLSERKRFGAILKEGKLIDAYRSLHEDKDMERGFSWSGNP 1087
             AKLNGYIPPNKEDCGQPGFTLSERKRFG IL+EGKL+DAYR LHEDKDMERGFSWSGNP
Sbjct: 233  VAKLNGYIPPNKEDCGQPGFTLSERKRFGTILREGKLVDAYRFLHEDKDMERGFSWSGNP 292

Query: 1088 VGKYRGKRMRIDYFIVSEKLKNRIVACEMHGQGIELQGFYGSDHCPVSLE 1237
            VG+YRGKRMRIDYF+VSEKLK RI ACEM G GIEL+GFYGSDHCPV+LE
Sbjct: 293  VGRYRGKRMRIDYFLVSEKLKERIAACEMRGHGIELEGFYGSDHCPVTLE 342


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