BLASTX nr result

ID: Panax21_contig00023766 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00023766
         (485 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK49671.1| nuclear transcription factor Y subunit C2 [Medica...   174   7e-42
ref|XP_003626304.1| Nuclear transcription factor Y subunit C-9 [...   174   7e-42
ref|XP_002512355.1| ccaat-binding transcription factor, putative...   174   7e-42
ref|XP_004135626.1| PREDICTED: nuclear transcription factor Y su...   170   1e-40
ref|XP_002311837.1| predicted protein [Populus trichocarpa] gi|2...   168   5e-40

>gb|AFK49671.1| nuclear transcription factor Y subunit C2 [Medicago truncatula]
          Length = 260

 Score =  174 bits (441), Expect = 7e-42
 Identities = 93/161 (57%), Positives = 103/161 (63%)
 Frame = -2

Query: 484 MDQQGHGQSQVPNVVGSAAQLPYSINQYESNQIXXXXXXXXXXXXXXXXXXTAPAPTGXX 305
           MD QGH Q+    VVGS +Q+PY  N Y+SNQ+                      P G  
Sbjct: 1   MDHQGHNQNPQMGVVGSGSQMPYGSNPYQSNQMTGAPGSVVTSVGGMQSTGQ---PAGAQ 57

Query: 304 XXXXXXXXXXXXXXXXXXXXXXXQTFWANQYQEIERVTDFKNHSLPLARIKKIMKADEDV 125
                                  Q+FW+NQYQEIE+VTDFKNHSLPLARIKKIMKADEDV
Sbjct: 58  LGQHQLAYQHIHQQQQQQLQQQLQSFWSNQYQEIEKVTDFKNHSLPLARIKKIMKADEDV 117

Query: 124 RMISAEAPIVFARACEMFILELTLRSWNHTEENKRRTLQKN 2
           RMISAEAP++FARACEMFILELTLRSWNHTEENKRRTLQKN
Sbjct: 118 RMISAEAPVIFARACEMFILELTLRSWNHTEENKRRTLQKN 158


>ref|XP_003626304.1| Nuclear transcription factor Y subunit C-9 [Medicago truncatula]
           gi|355501319|gb|AES82522.1| Nuclear transcription factor
           Y subunit C-9 [Medicago truncatula]
          Length = 311

 Score =  174 bits (441), Expect = 7e-42
 Identities = 93/161 (57%), Positives = 103/161 (63%)
 Frame = -2

Query: 484 MDQQGHGQSQVPNVVGSAAQLPYSINQYESNQIXXXXXXXXXXXXXXXXXXTAPAPTGXX 305
           MD QGH Q+    VVGS +Q+PY  N Y+SNQ+                      P G  
Sbjct: 52  MDHQGHNQNPQMGVVGSGSQMPYGSNPYQSNQMTGAPGSVVTSVGGMQSTGQ---PAGAQ 108

Query: 304 XXXXXXXXXXXXXXXXXXXXXXXQTFWANQYQEIERVTDFKNHSLPLARIKKIMKADEDV 125
                                  Q+FW+NQYQEIE+VTDFKNHSLPLARIKKIMKADEDV
Sbjct: 109 LGQHQLAYQHIHQQQQQQLQQQLQSFWSNQYQEIEKVTDFKNHSLPLARIKKIMKADEDV 168

Query: 124 RMISAEAPIVFARACEMFILELTLRSWNHTEENKRRTLQKN 2
           RMISAEAP++FARACEMFILELTLRSWNHTEENKRRTLQKN
Sbjct: 169 RMISAEAPVIFARACEMFILELTLRSWNHTEENKRRTLQKN 209


>ref|XP_002512355.1| ccaat-binding transcription factor, putative [Ricinus communis]
           gi|223548316|gb|EEF49807.1| ccaat-binding transcription
           factor, putative [Ricinus communis]
          Length = 247

 Score =  174 bits (441), Expect = 7e-42
 Identities = 93/161 (57%), Positives = 102/161 (63%)
 Frame = -2

Query: 484 MDQQGHGQSQVPNVVGSAAQLPYSINQYESNQIXXXXXXXXXXXXXXXXXXTAPAPTGXX 305
           MDQQGHGQ     VV +A Q+PY  N Y SNQ+                   A  PTG  
Sbjct: 1   MDQQGHGQPPAIGVVSTAGQMPYGTNPYPSNQLSSTQNPGSVGAIQS-----AGQPTGAQ 55

Query: 304 XXXXXXXXXXXXXXXXXXXXXXXQTFWANQYQEIERVTDFKNHSLPLARIKKIMKADEDV 125
                                  Q+FW NQY ++++VTDFKNHSLPLARIKKIMKADEDV
Sbjct: 56  LAQHQLAYQQIHHQQQQQLQQQLQSFWTNQYHDVDKVTDFKNHSLPLARIKKIMKADEDV 115

Query: 124 RMISAEAPIVFARACEMFILELTLRSWNHTEENKRRTLQKN 2
           RMISAEAP+VFARACEMFILELTLRSWNHTEENKRRTLQKN
Sbjct: 116 RMISAEAPVVFARACEMFILELTLRSWNHTEENKRRTLQKN 156


>ref|XP_004135626.1| PREDICTED: nuclear transcription factor Y subunit C-9-like [Cucumis
           sativus] gi|449485712|ref|XP_004157253.1| PREDICTED:
           nuclear transcription factor Y subunit C-9-like [Cucumis
           sativus]
          Length = 259

 Score =  170 bits (430), Expect = 1e-40
 Identities = 94/161 (58%), Positives = 100/161 (62%)
 Frame = -2

Query: 484 MDQQGHGQSQVPNVVGSAAQLPYSINQYESNQIXXXXXXXXXXXXXXXXXXTAPAPTGXX 305
           MDQQGHGQ      VGS  Q+ Y  N Y  NQ+                  T+  P G  
Sbjct: 1   MDQQGHGQPPSMGAVGSGGQIAYGSNLYHPNQMSVGPTSGSVVTSVGGIQSTSQ-PGGAQ 59

Query: 304 XXXXXXXXXXXXXXXXXXXXXXXQTFWANQYQEIERVTDFKNHSLPLARIKKIMKADEDV 125
                                  QTFW NQYQEIE+VTDFKNHSLPLARIKKIMKADEDV
Sbjct: 60  LAQHQLAYQHIHQQQQQQLQQQLQTFWVNQYQEIEKVTDFKNHSLPLARIKKIMKADEDV 119

Query: 124 RMISAEAPIVFARACEMFILELTLRSWNHTEENKRRTLQKN 2
           RMISAEAP++FARACEMFILELTLRSWNHTEENKRRTLQKN
Sbjct: 120 RMISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKN 160


>ref|XP_002311837.1| predicted protein [Populus trichocarpa] gi|222851657|gb|EEE89204.1|
           predicted protein [Populus trichocarpa]
          Length = 258

 Score =  168 bits (425), Expect = 5e-40
 Identities = 94/161 (58%), Positives = 101/161 (62%)
 Frame = -2

Query: 484 MDQQGHGQSQVPNVVGSAAQLPYSINQYESNQIXXXXXXXXXXXXXXXXXXTAPAPTGXX 305
           MDQQGH Q     +VGS A +PY I  Y+ NQ+                  TA   +   
Sbjct: 1   MDQQGHVQPPAVGMVGSTAPVPYGIPSYQHNQMMGPSATGSLQSPTQPAVLTA---SSAH 57

Query: 304 XXXXXXXXXXXXXXXXXXXXXXXQTFWANQYQEIERVTDFKNHSLPLARIKKIMKADEDV 125
                                  QTFWANQYQEIE+ TDFKNHSLPLARIKKIMKADEDV
Sbjct: 58  LAQHQLAYQHIHHQQQQQLQQQLQTFWANQYQEIEQTTDFKNHSLPLARIKKIMKADEDV 117

Query: 124 RMISAEAPIVFARACEMFILELTLRSWNHTEENKRRTLQKN 2
           RMISAEAPI+FARACEMFILELTLRSWNHTEENKRRTLQKN
Sbjct: 118 RMISAEAPIIFARACEMFILELTLRSWNHTEENKRRTLQKN 158


Top