BLASTX nr result

ID: Panax21_contig00023744 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00023744
         (624 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280526.1| PREDICTED: peroxisome biogenesis protein 22 ...   165   1e-44
gb|ABK92497.1| unknown [Populus trichocarpa]                          162   5e-43
ref|XP_002309836.1| predicted protein [Populus trichocarpa] gi|2...   162   5e-43
ref|XP_002515731.1| conserved hypothetical protein [Ricinus comm...   160   2e-42
gb|ABK92522.1| unknown [Populus trichocarpa]                          157   2e-41

>ref|XP_002280526.1| PREDICTED: peroxisome biogenesis protein 22 [Vitis vinifera]
           gi|297739312|emb|CBI28963.3| unnamed protein product
           [Vitis vinifera]
          Length = 275

 Score =  165 bits (418), Expect(2) = 1e-44
 Identities = 78/84 (92%), Positives = 83/84 (98%)
 Frame = +3

Query: 3   KFCDLYLMERVLDDESEKKVLVALEDAGVFTSGGLVKDKVLFCSTETGRTSFVRQLEPDW 182
           KFCDLYLMERVLDDESE+KVL+ALEDAGVFTSGGLVKDKVLFCSTETGR+SFVRQLEPDW
Sbjct: 169 KFCDLYLMERVLDDESERKVLLALEDAGVFTSGGLVKDKVLFCSTETGRSSFVRQLEPDW 228

Query: 183 HIDTNPEIVQQLARFIRYQLHISP 254
           HIDTNPE+V QLARFI+YQLHISP
Sbjct: 229 HIDTNPEVVSQLARFIKYQLHISP 252



 Score = 40.4 bits (93), Expect(2) = 1e-44
 Identities = 16/21 (76%), Positives = 20/21 (95%)
 Frame = +2

Query: 344 PERSASNILSSPSLEQFFGCV 406
           PER+ASN+ ++PSLEQFFGCV
Sbjct: 255 PERTASNVFTAPSLEQFFGCV 275


>gb|ABK92497.1| unknown [Populus trichocarpa]
          Length = 275

 Score =  162 bits (409), Expect(2) = 5e-43
 Identities = 76/85 (89%), Positives = 83/85 (97%)
 Frame = +3

Query: 3   KFCDLYLMERVLDDESEKKVLVALEDAGVFTSGGLVKDKVLFCSTETGRTSFVRQLEPDW 182
           KFCDLYLMERVLDDESE+K+L ALE+AGVFTSGGLVKDKVLFCSTETGR+SFVRQLEPDW
Sbjct: 169 KFCDLYLMERVLDDESEQKILAALENAGVFTSGGLVKDKVLFCSTETGRSSFVRQLEPDW 228

Query: 183 HIDTNPEIVQQLARFIRYQLHISPT 257
           HIDTNPEI+ QLARFI+YQLH+SPT
Sbjct: 229 HIDTNPEILFQLARFIKYQLHVSPT 253



 Score = 38.5 bits (88), Expect(2) = 5e-43
 Identities = 15/20 (75%), Positives = 19/20 (95%)
 Frame = +2

Query: 347 ERSASNILSSPSLEQFFGCV 406
           ER+A+N+ SSPSLEQFFGC+
Sbjct: 256 ERTAANVFSSPSLEQFFGCI 275


>ref|XP_002309836.1| predicted protein [Populus trichocarpa] gi|222852739|gb|EEE90286.1|
           predicted protein [Populus trichocarpa]
          Length = 153

 Score =  162 bits (409), Expect(2) = 5e-43
 Identities = 76/85 (89%), Positives = 83/85 (97%)
 Frame = +3

Query: 3   KFCDLYLMERVLDDESEKKVLVALEDAGVFTSGGLVKDKVLFCSTETGRTSFVRQLEPDW 182
           KFCDLYLMERVLDDESE+K+L ALE+AGVFTSGGLVKDKVLFCSTETGR+SFVRQLEPDW
Sbjct: 47  KFCDLYLMERVLDDESEQKILAALENAGVFTSGGLVKDKVLFCSTETGRSSFVRQLEPDW 106

Query: 183 HIDTNPEIVQQLARFIRYQLHISPT 257
           HIDTNPEI+ QLARFI+YQLH+SPT
Sbjct: 107 HIDTNPEILFQLARFIKYQLHVSPT 131



 Score = 38.5 bits (88), Expect(2) = 5e-43
 Identities = 15/20 (75%), Positives = 19/20 (95%)
 Frame = +2

Query: 347 ERSASNILSSPSLEQFFGCV 406
           ER+A+N+ SSPSLEQFFGC+
Sbjct: 134 ERTAANVFSSPSLEQFFGCI 153


>ref|XP_002515731.1| conserved hypothetical protein [Ricinus communis]
           gi|223545168|gb|EEF46678.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 279

 Score =  160 bits (404), Expect(2) = 2e-42
 Identities = 76/84 (90%), Positives = 81/84 (96%)
 Frame = +3

Query: 3   KFCDLYLMERVLDDESEKKVLVALEDAGVFTSGGLVKDKVLFCSTETGRTSFVRQLEPDW 182
           KFCDLYLMERVLDDESE+KVL ALE+AGVFTSGGLVKDKVLFCSTE GR+SFVRQLEPDW
Sbjct: 173 KFCDLYLMERVLDDESEQKVLAALENAGVFTSGGLVKDKVLFCSTENGRSSFVRQLEPDW 232

Query: 183 HIDTNPEIVQQLARFIRYQLHISP 254
           HIDTNPEIV QL+RFI+YQLHISP
Sbjct: 233 HIDTNPEIVSQLSRFIKYQLHISP 256



 Score = 38.5 bits (88), Expect(2) = 2e-42
 Identities = 15/20 (75%), Positives = 18/20 (90%)
 Frame = +2

Query: 344 PERSASNILSSPSLEQFFGC 403
           PERS +N+ SSP+LEQFFGC
Sbjct: 259 PERSCANVFSSPTLEQFFGC 278


>gb|ABK92522.1| unknown [Populus trichocarpa]
          Length = 275

 Score =  157 bits (396), Expect(2) = 2e-41
 Identities = 74/84 (88%), Positives = 81/84 (96%)
 Frame = +3

Query: 3   KFCDLYLMERVLDDESEKKVLVALEDAGVFTSGGLVKDKVLFCSTETGRTSFVRQLEPDW 182
           KFCD+YLMERVLDDESE+KVL ALE+AGVFTSGGLVKDKVLFCSTETGR+SFVRQLEPDW
Sbjct: 169 KFCDVYLMERVLDDESEQKVLAALENAGVFTSGGLVKDKVLFCSTETGRSSFVRQLEPDW 228

Query: 183 HIDTNPEIVQQLARFIRYQLHISP 254
           HIDTNPE++ QLARFI+YQL ISP
Sbjct: 229 HIDTNPEVIFQLARFIKYQLQISP 252



 Score = 38.1 bits (87), Expect(2) = 2e-41
 Identities = 16/19 (84%), Positives = 19/19 (100%)
 Frame = +2

Query: 344 PERSASNILSSPSLEQFFG 400
           PER+A+N+LSSPSLEQFFG
Sbjct: 255 PERTAANVLSSPSLEQFFG 273


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